RNA–Protein interactions for RNA: ENST00000584246.1

TMEM104-207, Transcript of transmembrane protein 104, humanhuman

TSL 3

Gene TMEM104, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-207ENST00000584246 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
TMEM104-207ENST00000584246 ZFYVE9O95405 1425 aa29.94■■■□□ 2.38
TMEM104-207ENST00000584246 GCC2Q8IWJ2 1684 aa29.94■■■□□ 2.38
TMEM104-207ENST00000584246 UNC13BO14795 1591 aa29.92■■■□□ 2.38
TMEM104-207ENST00000584246 FAM135BQ49AJ0 1406 aa29.91■■■□□ 2.38
TMEM104-207ENST00000584246 RIMS2Q9UQ26 1411 aa29.91■■■□□ 2.38
TMEM104-207ENST00000584246 TMEM131LA2VDJ0 1609 aa29.91■■■□□ 2.38
TMEM104-207ENST00000584246 NWD1Q149M9 1564 aa29.9■■■□□ 2.38
TMEM104-207ENST00000584246 CHGAP10645 457 aaKnown RBP29.89■■■□□ 2.38
TMEM104-207ENST00000584246 ITGAEP38570 1179 aa29.89■■■□□ 2.38
TMEM104-207ENST00000584246 NUTM2DQ5VT03 806 aaPredicted RBP29.89■■■□□ 2.38
TMEM104-207ENST00000584246 E9PCH4 1651 aa29.88■■■□□ 2.37
TMEM104-207ENST00000584246 RGS17Q9UGC6 210 aaPredicted RBP29.88■■■□□ 2.37
TMEM104-207ENST00000584246 PPP1R15AO75807 674 aaPredicted RBP29.87■■■□□ 2.37
TMEM104-207ENST00000584246 PLEKHG1Q9ULL1 1385 aa29.87■■■□□ 2.37
TMEM104-207ENST00000584246 ROBO1Q9Y6N7 1651 aa29.86■■■□□ 2.37
TMEM104-207ENST00000584246 NKTRP30414 1462 aaKnown RBP29.85■■■□□ 2.37
TMEM104-207ENST00000584246 ROCK1Q13464 1354 aa29.84■■■□□ 2.37
TMEM104-207ENST00000584246 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
TMEM104-207ENST00000584246 IQGAP3Q86VI3 1631 aa29.81■■■□□ 2.36
TMEM104-207ENST00000584246 NUP155O75694 1391 aa29.79■■■□□ 2.36
TMEM104-207ENST00000584246 MSH6P52701 1360 aa29.78■■■□□ 2.36
TMEM104-207ENST00000584246 HDGFP51858 240 aaKnown RBP29.78■■■□□ 2.36
TMEM104-207ENST00000584246 TBX22Q9Y458 520 aa29.77■■■□□ 2.36
TMEM104-207ENST00000584246 SLAIN2Q9P270 581 aa29.76■■■□□ 2.35
TMEM104-207ENST00000584246 ADAMTS13Q76LX8 1427 aa29.76■■■□□ 2.35
TMEM104-207ENST00000584246 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.74■■■□□ 2.35
TMEM104-207ENST00000584246 POTEAQ6S8J7 498 aa29.69■■■□□ 2.34
TMEM104-207ENST00000584246 PHLPP1O60346 1717 aa29.68■■■□□ 2.34
TMEM104-207ENST00000584246 C14orf37Q86TY3 774 aa29.66■■■□□ 2.34
TMEM104-207ENST00000584246 PTPRUQ92729 1446 aa29.65■■■□□ 2.34
TMEM104-207ENST00000584246 DIP2AQ14689 1571 aa29.62■■■□□ 2.33
TMEM104-207ENST00000584246 AMOTL2Q9Y2J4 779 aa29.62■■■□□ 2.33
TMEM104-207ENST00000584246 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
TMEM104-207ENST00000584246 NCOA3Q9Y6Q9 1424 aa29.6■■■□□ 2.33
TMEM104-207ENST00000584246 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
TMEM104-207ENST00000584246 SPHKAPQ2M3C7 1700 aa29.59■■■□□ 2.33
TMEM104-207ENST00000584246 COL16A1Q07092 1604 aaPredicted RBP29.58■■■□□ 2.33
TMEM104-207ENST00000584246 C19orf44Q9H6X5 657 aa29.58■■■□□ 2.33
TMEM104-207ENST00000584246 NRXN3Q9Y4C0 1643 aa29.57■■■□□ 2.32
TMEM104-207ENST00000584246 TRPM2O94759 1503 aa29.57■■■□□ 2.32
TMEM104-207ENST00000584246 JCADQ9P266 1359 aa29.57■■■□□ 2.32
TMEM104-207ENST00000584246 ZNF326Q5BKZ1 582 aaKnown RBP29.56■■■□□ 2.32
TMEM104-207ENST00000584246 ATF3P18847 181 aa29.55■■■□□ 2.32
TMEM104-207ENST00000584246 CADPS2Q86UW7 1296 aa29.54■■■□□ 2.32
TMEM104-207ENST00000584246 METP08581 1390 aa29.51■■■□□ 2.31
TMEM104-207ENST00000584246 CLTCL1P53675 1640 aa29.5■■■□□ 2.31
TMEM104-207ENST00000584246 SETBP1Q9Y6X0 1596 aa29.5■■■□□ 2.31
TMEM104-207ENST00000584246 LRP6O75581 1613 aa29.49■■■□□ 2.31
TMEM104-207ENST00000584246 XRN1Q8IZH2 1706 aaKnown RBP29.48■■■□□ 2.31
TMEM104-207ENST00000584246 NAIPQ13075 1403 aa29.48■■■□□ 2.31
TMEM104-207ENST00000584246 RRBP1Q9P2E9 1410 aaKnown RBP29.48■■■□□ 2.31
TMEM104-207ENST00000584246 BRINP3Q76B58 766 aa29.48■■■□□ 2.31
TMEM104-207ENST00000584246 AHDC1Q5TGY3 1603 aaPredicted RBP29.46■■■□□ 2.31
TMEM104-207ENST00000584246 NEXMIFQ5QGS0 1516 aa29.45■■■□□ 2.3
TMEM104-207ENST00000584246 SETD1AO15047 1707 aaKnown RBP29.42■■■□□ 2.3
TMEM104-207ENST00000584246 SPATA31A6Q5VVP1 1343 aa29.4■■■□□ 2.3
TMEM104-207ENST00000584246 MEX3CQ5U5Q3 659 aaKnown RBP29.39■■■□□ 2.3
TMEM104-207ENST00000584246 MST1RQ04912 1400 aa29.38■■■□□ 2.29
TMEM104-207ENST00000584246 TRIM52Q96A61 297 aa29.38■■■□□ 2.29
TMEM104-207ENST00000584246 SHPRHQ149N8 1683 aa29.37■■■□□ 2.29
TMEM104-207ENST00000584246 DCCP43146 1447 aa29.37■■■□□ 2.29
TMEM104-207ENST00000584246 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
TMEM104-207ENST00000584246 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
TMEM104-207ENST00000584246 KIF1BO60333 1816 aa29.36■■■□□ 2.29
TMEM104-207ENST00000584246 NUTM2BA6NNL0 878 aaPredicted RBP29.35■■■□□ 2.29
TMEM104-207ENST00000584246 NUTM2EB1AL46 878 aaPredicted RBP29.35■■■□□ 2.29
TMEM104-207ENST00000584246 NUTM2AQ8IVF1 878 aaPredicted RBP29.35■■■□□ 2.29
TMEM104-207ENST00000584246 NALCNQ8IZF0 1738 aa29.32■■■□□ 2.28
TMEM104-207ENST00000584246 ADGRL3Q9HAR2 1447 aa29.31■■■□□ 2.28
TMEM104-207ENST00000584246 HFM1A2PYH4 1435 aa29.29■■■□□ 2.28
TMEM104-207ENST00000584246 SLC4A1APQ9BWU0 796 aaKnown RBP29.29■■■□□ 2.28
TMEM104-207ENST00000584246 NHSL1Q5SYE7 1610 aa29.29■■■□□ 2.28
TMEM104-207ENST00000584246 FOXD1Q16676 465 aa29.28■■■□□ 2.28
TMEM104-207ENST00000584246 SETD5Q9C0A6 1442 aa29.27■■■□□ 2.28
TMEM104-207ENST00000584246 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
TMEM104-207ENST00000584246 ROBO2Q9HCK4 1378 aa29.26■■■□□ 2.27
TMEM104-207ENST00000584246 VGFO15240 615 aaPredicted RBP29.24■■■□□ 2.27
TMEM104-207ENST00000584246 LRRC59Q96AG4 307 aaKnown RBP29.21■■■□□ 2.27
TMEM104-207ENST00000584246 C1orf167Q5SNV9 1468 aa29.21■■■□□ 2.27
TMEM104-207ENST00000584246 AFF2P51816 1311 aa29.2■■■□□ 2.26
TMEM104-207ENST00000584246 ORAI2Q96SN7 254 aa29.19■■■□□ 2.26
TMEM104-207ENST00000584246 PTCH1Q13635 1447 aa29.19■■■□□ 2.26
TMEM104-207ENST00000584246 PPLO60437 1756 aa29.18■■■□□ 2.26
TMEM104-207ENST00000584246 PNPLA6Q8IY17 1366 aa29.18■■■□□ 2.26
TMEM104-207ENST00000584246 RPGRIP1LQ68CZ1 1315 aa29.18■■■□□ 2.26
TMEM104-207ENST00000584246 RXRBP28702 533 aa29.17■■■□□ 2.26
TMEM104-207ENST00000584246 UPF1Q92900 1129 aaKnown RBP eCLIP29.14■■■□□ 2.26
TMEM104-207ENST00000584246 C8orf37Q96NL8 207 aa29.14■■■□□ 2.26
TMEM104-207ENST00000584246 ADGRF5Q8IZF2 1346 aa29.13■■■□□ 2.25
TMEM104-207ENST00000584246 RGL3Q3MIN7 710 aa29.11■■■□□ 2.25
TMEM104-207ENST00000584246 ADAMTS2O95450 1211 aa29.09■■■□□ 2.25
TMEM104-207ENST00000584246 PRAG1Q86YV5 1406 aa29.09■■■□□ 2.25
TMEM104-207ENST00000584246 LAMC1P11047 1609 aa29.07■■■□□ 2.24
TMEM104-207ENST00000584246 SOS2Q07890 1332 aaPredicted RBP29.07■■■□□ 2.24
TMEM104-207ENST00000584246 MPHOSPH9Q99550 1183 aa29.06■■■□□ 2.24
TMEM104-207ENST00000584246 QTRT2Q9H974 415 aaKnown RBP29.06■■■□□ 2.24
TMEM104-207ENST00000584246 STK26Q9P289 416 aa29.05■■■□□ 2.24
TMEM104-207ENST00000584246 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
TMEM104-207ENST00000584246 SPATA31E1Q6ZUB1 1445 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms