RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
GGA3-218ENST00000584243 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.61□□□□□ -0.39
GGA3-218ENST00000584243 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
GGA3-218ENST00000584243 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
GGA3-218ENST00000584243 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
GGA3-218ENST00000584243 CDC42BPAQ5VT25 1732 aa12.6□□□□□ -0.39
GGA3-218ENST00000584243 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
GGA3-218ENST00000584243 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
GGA3-218ENST00000584243 GLI3P10071 1580 aa12.6□□□□□ -0.39
GGA3-218ENST00000584243 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
GGA3-218ENST00000584243 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
GGA3-218ENST00000584243 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
GGA3-218ENST00000584243 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
GGA3-218ENST00000584243 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
GGA3-218ENST00000584243 TMEM2Q9UHN6 1383 aa12.57□□□□□ -0.4
GGA3-218ENST00000584243 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
GGA3-218ENST00000584243 PRELPP51888 382 aa12.57□□□□□ -0.4
GGA3-218ENST00000584243 EN1Q05925 392 aaPredicted RBP12.57□□□□□ -0.4
GGA3-218ENST00000584243 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
GGA3-218ENST00000584243 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
GGA3-218ENST00000584243 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
GGA3-218ENST00000584243 CLIP1P30622 1438 aa12.56□□□□□ -0.4
GGA3-218ENST00000584243 KIF3BO15066 747 aa12.56□□□□□ -0.4
GGA3-218ENST00000584243 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
GGA3-218ENST00000584243 RALGAPBQ86X10 1494 aa12.56□□□□□ -0.4
GGA3-218ENST00000584243 BAG6P46379 1132 aa12.55□□□□□ -0.4
GGA3-218ENST00000584243 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
GGA3-218ENST00000584243 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
GGA3-218ENST00000584243 COL13A1Q5TAT6 717 aaPredicted RBP12.54□□□□□ -0.4
GGA3-218ENST00000584243 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
GGA3-218ENST00000584243 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
GGA3-218ENST00000584243 LRRIQ1Q96JM4 1722 aa12.53□□□□□ -0.4
GGA3-218ENST00000584243 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
GGA3-218ENST00000584243 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
GGA3-218ENST00000584243 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.41
GGA3-218ENST00000584243 CHD4Q14839 1912 aa12.51□□□□□ -0.41
GGA3-218ENST00000584243 C19orf44Q9H6X5 657 aa12.5□□□□□ -0.41
GGA3-218ENST00000584243 PIK3C2BO00750 1634 aa12.49□□□□□ -0.41
GGA3-218ENST00000584243 ATF3P18847 181 aa12.49□□□□□ -0.41
GGA3-218ENST00000584243 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
GGA3-218ENST00000584243 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
GGA3-218ENST00000584243 MST1RQ04912 1400 aa12.48□□□□□ -0.41
GGA3-218ENST00000584243 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
GGA3-218ENST00000584243 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
GGA3-218ENST00000584243 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
GGA3-218ENST00000584243 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.46□□□□□ -0.41
GGA3-218ENST00000584243 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
GGA3-218ENST00000584243 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
GGA3-218ENST00000584243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■■□□□ 11.4
GGA3-218ENST00000584243 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
GGA3-218ENST00000584243 C14orf37Q86TY3 774 aa12.45□□□□□ -0.42
GGA3-218ENST00000584243 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
GGA3-218ENST00000584243 HSPA6P17066 643 aa12.44□□□□□ -0.42
GGA3-218ENST00000584243 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
GGA3-218ENST00000584243 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
GGA3-218ENST00000584243 MYOM2P54296 1465 aa12.44□□□□□ -0.42
GGA3-218ENST00000584243 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
GGA3-218ENST00000584243 KCNQ2O43526 872 aa12.43□□□□□ -0.42
GGA3-218ENST00000584243 KRT27Q7Z3Y8 459 aa12.43□□□□□ -0.42
GGA3-218ENST00000584243 COL22A1Q8NFW1 1626 aaPredicted RBP12.43□□□□□ -0.42
GGA3-218ENST00000584243 CFAP65Q6ZU64 1925 aaKnown RBP12.43□□□□□ -0.42
GGA3-218ENST00000584243 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
GGA3-218ENST00000584243 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
GGA3-218ENST00000584243 EFCAB6Q5THR3 1501 aa12.42□□□□□ -0.42
GGA3-218ENST00000584243 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
GGA3-218ENST00000584243 LAMC1P11047 1609 aa12.4□□□□□ -0.42
GGA3-218ENST00000584243 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
GGA3-218ENST00000584243 DCCP43146 1447 aa12.4□□□□□ -0.42
GGA3-218ENST00000584243 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
GGA3-218ENST00000584243 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.43
GGA3-218ENST00000584243 SLIT2O94813 1529 aa12.39□□□□□ -0.43
GGA3-218ENST00000584243 TNS4Q8IZW8 715 aa12.39□□□□□ -0.43
GGA3-218ENST00000584243 GOLGB1Q14789 3259 aaKnown RBP12.39□□□□□ -0.43
GGA3-218ENST00000584243 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
GGA3-218ENST00000584243 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
GGA3-218ENST00000584243 MYOM1P52179 1685 aa12.37□□□□□ -0.43
GGA3-218ENST00000584243 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
GGA3-218ENST00000584243 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
GGA3-218ENST00000584243 RREB1Q92766 1687 aa12.36□□□□□ -0.43
GGA3-218ENST00000584243 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
GGA3-218ENST00000584243 PCNTO95613 3336 aa12.35□□□□□ -0.43
GGA3-218ENST00000584243 CEP152O94986 1710 aa12.35□□□□□ -0.43
GGA3-218ENST00000584243 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
GGA3-218ENST00000584243 DNAJC5GQ8N7S2 189 aa12.35□□□□□ -0.43
GGA3-218ENST00000584243 FMN1Q68DA7 1419 aa12.35□□□□□ -0.43
GGA3-218ENST00000584243 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
GGA3-218ENST00000584243 IDI1Q13907 227 aa12.32□□□□□ -0.44
GGA3-218ENST00000584243 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
GGA3-218ENST00000584243 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
GGA3-218ENST00000584243 BCANQ96GW7 911 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 TRPM2O94759 1503 aa12.31□□□□□ -0.44
GGA3-218ENST00000584243 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
GGA3-218ENST00000584243 PTGER2P43116 358 aa12.3□□□□□ -0.44
GGA3-218ENST00000584243 TBX22Q9Y458 520 aa12.3□□□□□ -0.44
GGA3-218ENST00000584243 CASZ1Q86V15 1759 aa12.29□□□□□ -0.44
GGA3-218ENST00000584243 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms