RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
ERBB2-216ENST00000584014 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
ERBB2-216ENST00000584014 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
ERBB2-216ENST00000584014 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
ERBB2-216ENST00000584014 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
ERBB2-216ENST00000584014 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
ERBB2-216ENST00000584014 ANKRD30BQ9BXX2 1392 aa12.13□□□□□ -0.47
ERBB2-216ENST00000584014 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
ERBB2-216ENST00000584014 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
ERBB2-216ENST00000584014 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
ERBB2-216ENST00000584014 LTKP29376 864 aa12.11□□□□□ -0.47
ERBB2-216ENST00000584014 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
ERBB2-216ENST00000584014 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
ERBB2-216ENST00000584014 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
ERBB2-216ENST00000584014 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-216ENST00000584014 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
ERBB2-216ENST00000584014 POLR1AO95602 1720 aaPredicted RBP12.08□□□□□ -0.47
ERBB2-216ENST00000584014 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
ERBB2-216ENST00000584014 SLC26A8Q96RN1 970 aa12.08□□□□□ -0.48
ERBB2-216ENST00000584014 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
ERBB2-216ENST00000584014 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
ERBB2-216ENST00000584014 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-216ENST00000584014 SLIT1O75093 1534 aa12.06□□□□□ -0.48
ERBB2-216ENST00000584014 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-216ENST00000584014 ARHGAP23Q9P227 1491 aa12.04□□□□□ -0.48
ERBB2-216ENST00000584014 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
ERBB2-216ENST00000584014 IQGAP1P46940 1657 aa12.03□□□□□ -0.48
ERBB2-216ENST00000584014 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
ERBB2-216ENST00000584014 TONSLQ96HA7 1378 aa12.03□□□□□ -0.48
ERBB2-216ENST00000584014 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
ERBB2-216ENST00000584014 PPLO60437 1756 aa12.02□□□□□ -0.48
ERBB2-216ENST00000584014 NEXMIFQ5QGS0 1516 aa12.02□□□□□ -0.48
ERBB2-216ENST00000584014 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.49
ERBB2-216ENST00000584014 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
ERBB2-216ENST00000584014 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.49
ERBB2-216ENST00000584014 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
ERBB2-216ENST00000584014 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
ERBB2-216ENST00000584014 IFT172Q9UG01 1749 aa11.98□□□□□ -0.49
ERBB2-216ENST00000584014 MED14O60244 1454 aa11.98□□□□□ -0.49
ERBB2-216ENST00000584014 STK26Q9P289 416 aa11.98□□□□□ -0.49
ERBB2-216ENST00000584014 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
ERBB2-216ENST00000584014 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
ERBB2-216ENST00000584014 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
ERBB2-216ENST00000584014 TBX22Q9Y458 520 aa11.96□□□□□ -0.49
ERBB2-216ENST00000584014 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
ERBB2-216ENST00000584014 ADAMTS13Q76LX8 1427 aa11.94□□□□□ -0.5
ERBB2-216ENST00000584014 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
ERBB2-216ENST00000584014 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
ERBB2-216ENST00000584014 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
ERBB2-216ENST00000584014 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
ERBB2-216ENST00000584014 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
ERBB2-216ENST00000584014 METP08581 1390 aa11.93□□□□□ -0.5
ERBB2-216ENST00000584014 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
ERBB2-216ENST00000584014 MYOM2P54296 1465 aa11.93□□□□□ -0.5
ERBB2-216ENST00000584014 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
ERBB2-216ENST00000584014 KCNA6P17658 529 aa11.92□□□□□ -0.5
ERBB2-216ENST00000584014 STAC3Q96MF2 364 aa11.92□□□□□ -0.5
ERBB2-216ENST00000584014 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
ERBB2-216ENST00000584014 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
ERBB2-216ENST00000584014 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
ERBB2-216ENST00000584014 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
ERBB2-216ENST00000584014 SAFB2Q14151 953 aaKnown RBP eCLIP11.9□□□□□ -0.5
ERBB2-216ENST00000584014 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
ERBB2-216ENST00000584014 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
ERBB2-216ENST00000584014 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
ERBB2-216ENST00000584014 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
ERBB2-216ENST00000584014 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
ERBB2-216ENST00000584014 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 PTPRUQ92729 1446 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 POGKQ9P215 609 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 NRXN1Q9ULB1 1477 aa11.88□□□□□ -0.51
ERBB2-216ENST00000584014 LAMC1P11047 1609 aa11.87□□□□□ -0.51
ERBB2-216ENST00000584014 SETD1AO15047 1707 aaKnown RBP11.87□□□□□ -0.51
ERBB2-216ENST00000584014 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
ERBB2-216ENST00000584014 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
ERBB2-216ENST00000584014 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
ERBB2-216ENST00000584014 PIK3R4Q99570 1358 aa11.86□□□□□ -0.51
ERBB2-216ENST00000584014 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
ERBB2-216ENST00000584014 CPS1P31327 1500 aa11.86□□□□□ -0.51
ERBB2-216ENST00000584014 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
ERBB2-216ENST00000584014 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
ERBB2-216ENST00000584014 PRAM1Q96QH2 718 aa11.85□□□□□ -0.51
ERBB2-216ENST00000584014 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
ERBB2-216ENST00000584014 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
ERBB2-216ENST00000584014 LRPPRCP42704 1394 aaKnown RBP11.84□□□□□ -0.51
ERBB2-216ENST00000584014 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
ERBB2-216ENST00000584014 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
ERBB2-216ENST00000584014 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
ERBB2-216ENST00000584014 UBAP1LF5GYI3 381 aa11.83□□□□□ -0.52
ERBB2-216ENST00000584014 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
ERBB2-216ENST00000584014 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
ERBB2-216ENST00000584014 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
ERBB2-216ENST00000584014 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
ERBB2-216ENST00000584014 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
ERBB2-216ENST00000584014 ATF3P18847 181 aa11.82□□□□□ -0.52
ERBB2-216ENST00000584014 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-216ENST00000584014 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-216ENST00000584014 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms