RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 RGL3Q3MIN7 710 aa14.27□□□□□ -0.12
IFT20-213ENST00000583796 HIRIP3Q9BW71 556 aaPredicted RBP14.27□□□□□ -0.12
IFT20-213ENST00000583796 KDM2AQ9Y2K7 1162 aa14.27□□□□□ -0.12
IFT20-213ENST00000583796 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
IFT20-213ENST00000583796 NRXN1Q9ULB1 1477 aa14.26□□□□□ -0.13
IFT20-213ENST00000583796 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
IFT20-213ENST00000583796 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
IFT20-213ENST00000583796 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
IFT20-213ENST00000583796 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
IFT20-213ENST00000583796 RPGRIP1LQ68CZ1 1315 aa14.24□□□□□ -0.13
IFT20-213ENST00000583796 SYNMO15061 1565 aa14.24□□□□□ -0.13
IFT20-213ENST00000583796 PREX1Q8TCU6 1659 aa14.24□□□□□ -0.13
IFT20-213ENST00000583796 ANP32CO43423 234 aa14.24□□□□□ -0.13
IFT20-213ENST00000583796 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
IFT20-213ENST00000583796 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
IFT20-213ENST00000583796 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
IFT20-213ENST00000583796 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
IFT20-213ENST00000583796 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
IFT20-213ENST00000583796 PPLO60437 1756 aa14.22□□□□□ -0.13
IFT20-213ENST00000583796 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.14
IFT20-213ENST00000583796 SCAF11Q99590 1463 aaKnown RBP14.2□□□□□ -0.14
IFT20-213ENST00000583796 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
IFT20-213ENST00000583796 SPATA31D1Q6ZQQ2 1576 aa14.19□□□□□ -0.14
IFT20-213ENST00000583796 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
IFT20-213ENST00000583796 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
IFT20-213ENST00000583796 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
IFT20-213ENST00000583796 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
IFT20-213ENST00000583796 PIK3C2GO75747 1445 aa14.17□□□□□ -0.14
IFT20-213ENST00000583796 ST20-MTHFSA0A0A6YYL1 179 aa14.17□□□□□ -0.14
IFT20-213ENST00000583796 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
IFT20-213ENST00000583796 NEXMIFQ5QGS0 1516 aa14.16□□□□□ -0.14
IFT20-213ENST00000583796 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
IFT20-213ENST00000583796 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
IFT20-213ENST00000583796 NBPF1Q3BBV0 1214 aa14.15□□□□□ -0.14
IFT20-213ENST00000583796 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
IFT20-213ENST00000583796 MYO3AQ8NEV4 1616 aa14.14□□□□□ -0.15
IFT20-213ENST00000583796 KDM5AP29375 1690 aaKnown RBP14.13□□□□□ -0.15
IFT20-213ENST00000583796 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
IFT20-213ENST00000583796 TESK2Q96S53 571 aa14.12□□□□□ -0.15
IFT20-213ENST00000583796 KTN1Q86UP2 1357 aaKnown RBP14.12□□□□□ -0.15
IFT20-213ENST00000583796 SBNO2Q9Y2G9 1366 aa14.12□□□□□ -0.15
IFT20-213ENST00000583796 TMF1P82094 1093 aa14.11□□□□□ -0.15
IFT20-213ENST00000583796 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
IFT20-213ENST00000583796 ADGRF5Q8IZF2 1346 aa14.11□□□□□ -0.15
IFT20-213ENST00000583796 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
IFT20-213ENST00000583796 IDI1Q13907 227 aa14.09□□□□□ -0.15
IFT20-213ENST00000583796 ESF1Q9H501 851 aaKnown RBP14.09□□□□□ -0.15
IFT20-213ENST00000583796 C14orf93Q9H972 538 aaKnown RBP14.09□□□□□ -0.15
IFT20-213ENST00000583796 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
IFT20-213ENST00000583796 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
IFT20-213ENST00000583796 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
IFT20-213ENST00000583796 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
IFT20-213ENST00000583796 CFAP70Q5T0N1 1121 aa14.06□□□□□ -0.16
IFT20-213ENST00000583796 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
IFT20-213ENST00000583796 DISP3Q9P2K9 1392 aa14.04□□□□□ -0.16
IFT20-213ENST00000583796 A2ML1A8K2U0 1454 aa14.04□□□□□ -0.16
IFT20-213ENST00000583796 CAPN15O75808 1086 aa14.04□□□□□ -0.16
IFT20-213ENST00000583796 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
IFT20-213ENST00000583796 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
IFT20-213ENST00000583796 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.16
IFT20-213ENST00000583796 NLRP1Q9C000 1473 aa14.02□□□□□ -0.17
IFT20-213ENST00000583796 MLECQ14165 292 aa14□□□□□ -0.17
IFT20-213ENST00000583796 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
IFT20-213ENST00000583796 TNRQ92752 1358 aa14□□□□□ -0.17
IFT20-213ENST00000583796 FER1L4A9Z1Z3 1794 aa14□□□□□ -0.17
IFT20-213ENST00000583796 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
IFT20-213ENST00000583796 QRICH2Q9H0J4 1663 aa14□□□□□ -0.17
IFT20-213ENST00000583796 RALBP1Q15311 655 aa13.99□□□□□ -0.17
IFT20-213ENST00000583796 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
IFT20-213ENST00000583796 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
IFT20-213ENST00000583796 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
IFT20-213ENST00000583796 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
IFT20-213ENST00000583796 PUS7Q96PZ0 661 aaKnown RBP13.99□□□□□ -0.17
IFT20-213ENST00000583796 POLR3GLQ9BT43 218 aa13.99□□□□□ -0.17
IFT20-213ENST00000583796 MYOM1P52179 1685 aa13.98□□□□□ -0.17
IFT20-213ENST00000583796 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
IFT20-213ENST00000583796 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
IFT20-213ENST00000583796 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
IFT20-213ENST00000583796 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
IFT20-213ENST00000583796 C3P01024 1663 aa13.96□□□□□ -0.17
IFT20-213ENST00000583796 DLC1Q96QB1 1528 aa13.96□□□□□ -0.18
IFT20-213ENST00000583796 PARD3Q8TEW0 1356 aa13.95□□□□□ -0.18
IFT20-213ENST00000583796 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
IFT20-213ENST00000583796 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
IFT20-213ENST00000583796 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
IFT20-213ENST00000583796 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
IFT20-213ENST00000583796 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
IFT20-213ENST00000583796 YTHDC2Q9H6S0 1430 aaKnown RBP13.93□□□□□ -0.18
IFT20-213ENST00000583796 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
IFT20-213ENST00000583796 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
IFT20-213ENST00000583796 NINLQ9Y2I6 1382 aa13.92□□□□□ -0.18
IFT20-213ENST00000583796 DSG3P32926 999 aa13.92□□□□□ -0.18
IFT20-213ENST00000583796 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
IFT20-213ENST00000583796 PTPRMP28827 1452 aa13.91□□□□□ -0.18
IFT20-213ENST00000583796 NRXN3Q9Y4C0 1643 aa13.91□□□□□ -0.18
IFT20-213ENST00000583796 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
IFT20-213ENST00000583796 PANK3Q9H999 370 aa13.91□□□□□ -0.18
IFT20-213ENST00000583796 SLIT1O75093 1534 aa13.9□□□□□ -0.18
IFT20-213ENST00000583796 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
IFT20-213ENST00000583796 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms