RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 NKTRP30414 1462 aaKnown RBP31.77■■■□□ 2.68
SRSF1-206ENST00000583741 SLC52A1Q9NWF4 448 aa31.77■■■□□ 2.68
SRSF1-206ENST00000583741 GCC2Q8IWJ2 1684 aa31.76■■■□□ 2.67
SRSF1-206ENST00000583741 FAM50AQ14320 339 aaKnown RBP31.76■■■□□ 2.67
SRSF1-206ENST00000583741 PROSER2Q86WR7 435 aaPredicted RBP31.76■■■□□ 2.67
SRSF1-206ENST00000583741 ZFYVE9O95405 1425 aa31.74■■■□□ 2.67
SRSF1-206ENST00000583741 TMEM131LA2VDJ0 1609 aa31.71■■■□□ 2.67
SRSF1-206ENST00000583741 CHD2O14647 1828 aaKnown RBP31.69■■■□□ 2.66
SRSF1-206ENST00000583741 UNC13BO14795 1591 aa31.69■■■□□ 2.66
SRSF1-206ENST00000583741 BCANQ96GW7 911 aa31.68■■■□□ 2.66
SRSF1-206ENST00000583741 PLEKHG1Q9ULL1 1385 aa31.67■■■□□ 2.66
SRSF1-206ENST00000583741 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
SRSF1-206ENST00000583741 MSH6P52701 1360 aa31.64■■■□□ 2.66
SRSF1-206ENST00000583741 E9PCH4 1651 aa31.64■■■□□ 2.65
SRSF1-206ENST00000583741 PHLPP1O60346 1717 aa31.61■■■□□ 2.65
SRSF1-206ENST00000583741 PPP1R15AO75807 674 aaPredicted RBP31.59■■■□□ 2.65
SRSF1-206ENST00000583741 POTEAQ6S8J7 498 aa31.57■■■□□ 2.64
SRSF1-206ENST00000583741 SLAIN2Q9P270 581 aa31.57■■■□□ 2.64
SRSF1-206ENST00000583741 IQGAP3Q86VI3 1631 aa31.56■■■□□ 2.64
SRSF1-206ENST00000583741 ADAMTS13Q76LX8 1427 aa31.53■■■□□ 2.64
SRSF1-206ENST00000583741 HDGFP51858 240 aaKnown RBP31.52■■■□□ 2.64
SRSF1-206ENST00000583741 TBX22Q9Y458 520 aa31.52■■■□□ 2.64
SRSF1-206ENST00000583741 CHGAP10645 457 aaKnown RBP31.52■■■□□ 2.64
SRSF1-206ENST00000583741 COL16A1Q07092 1604 aaPredicted RBP31.51■■■□□ 2.63
SRSF1-206ENST00000583741 ROCK1Q13464 1354 aa31.51■■■□□ 2.63
SRSF1-206ENST00000583741 NUTM2DQ5VT03 806 aaPredicted RBP31.51■■■□□ 2.63
SRSF1-206ENST00000583741 DIP2AQ14689 1571 aa31.5■■■□□ 2.63
SRSF1-206ENST00000583741 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.48■■■□□ 2.63
SRSF1-206ENST00000583741 NCOA3Q9Y6Q9 1424 aa31.47■■■□□ 2.63
SRSF1-206ENST00000583741 JCADQ9P266 1359 aa31.47■■■□□ 2.63
SRSF1-206ENST00000583741 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.47■■■□□ 2.63
SRSF1-206ENST00000583741 SETD1AO15047 1707 aaKnown RBP31.43■■■□□ 2.62
SRSF1-206ENST00000583741 PIK3R4Q99570 1358 aa31.42■■■□□ 2.62
SRSF1-206ENST00000583741 C14orf37Q86TY3 774 aa31.41■■■□□ 2.62
SRSF1-206ENST00000583741 NUP155O75694 1391 aa31.41■■■□□ 2.62
SRSF1-206ENST00000583741 TRPM2O94759 1503 aa31.4■■■□□ 2.62
SRSF1-206ENST00000583741 AHDC1Q5TGY3 1603 aaPredicted RBP31.39■■■□□ 2.62
SRSF1-206ENST00000583741 LRP6O75581 1613 aa31.38■■■□□ 2.61
SRSF1-206ENST00000583741 PTPRUQ92729 1446 aa31.38■■■□□ 2.61
SRSF1-206ENST00000583741 NRXN3Q9Y4C0 1643 aa31.37■■■□□ 2.61
SRSF1-206ENST00000583741 C19orf44Q9H6X5 657 aa31.35■■■□□ 2.61
SRSF1-206ENST00000583741 SPHKAPQ2M3C7 1700 aa31.35■■■□□ 2.61
SRSF1-206ENST00000583741 ITGAEP38570 1179 aa31.34■■■□□ 2.61
SRSF1-206ENST00000583741 CADPS2Q86UW7 1296 aa31.34■■■□□ 2.61
SRSF1-206ENST00000583741 SHPRHQ149N8 1683 aa31.33■■■□□ 2.61
SRSF1-206ENST00000583741 AMOTL2Q9Y2J4 779 aa31.33■■■□□ 2.61
SRSF1-206ENST00000583741 XRN1Q8IZH2 1706 aaKnown RBP31.33■■■□□ 2.61
SRSF1-206ENST00000583741 ATF3P18847 181 aa31.32■■■□□ 2.6
SRSF1-206ENST00000583741 SETBP1Q9Y6X0 1596 aa31.3■■■□□ 2.6
SRSF1-206ENST00000583741 SPATA31A6Q5VVP1 1343 aa31.29■■■□□ 2.6
SRSF1-206ENST00000583741 BRINP3Q76B58 766 aa31.25■■■□□ 2.59
SRSF1-206ENST00000583741 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
SRSF1-206ENST00000583741 DCCP43146 1447 aa31.24■■■□□ 2.59
SRSF1-206ENST00000583741 MEX3CQ5U5Q3 659 aaKnown RBP31.21■■■□□ 2.59
SRSF1-206ENST00000583741 ASXL1Q8IXJ9 1541 aa31.21■■■□□ 2.59
SRSF1-206ENST00000583741 CLTCL1P53675 1640 aa31.21■■■□□ 2.59
SRSF1-206ENST00000583741 METP08581 1390 aa31.2■■■□□ 2.59
SRSF1-206ENST00000583741 MST1RQ04912 1400 aa31.19■■■□□ 2.58
SRSF1-206ENST00000583741 NHSL1Q5SYE7 1610 aa31.18■■■□□ 2.58
SRSF1-206ENST00000583741 ZNF326Q5BKZ1 582 aaKnown RBP31.18■■■□□ 2.58
SRSF1-206ENST00000583741 NEXMIFQ5QGS0 1516 aa31.18■■■□□ 2.58
SRSF1-206ENST00000583741 ZNF772Q68DY9 489 aaPredicted RBP31.15■■■□□ 2.58
SRSF1-206ENST00000583741 NALCNQ8IZF0 1738 aa31.15■■■□□ 2.58
SRSF1-206ENST00000583741 SETD5Q9C0A6 1442 aa31.11■■■□□ 2.57
SRSF1-206ENST00000583741 ADGRL3Q9HAR2 1447 aa31.11■■■□□ 2.57
SRSF1-206ENST00000583741 NUTM2BA6NNL0 878 aaPredicted RBP31.11■■■□□ 2.57
SRSF1-206ENST00000583741 NUTM2EB1AL46 878 aaPredicted RBP31.11■■■□□ 2.57
SRSF1-206ENST00000583741 NUTM2AQ8IVF1 878 aaPredicted RBP31.11■■■□□ 2.57
SRSF1-206ENST00000583741 KIF1BO60333 1816 aa31.11■■■□□ 2.57
SRSF1-206ENST00000583741 TRIM52Q96A61 297 aa31.1■■■□□ 2.57
SRSF1-206ENST00000583741 NAIPQ13075 1403 aa31.05■■■□□ 2.56
SRSF1-206ENST00000583741 DDX17Q92841 729 aaKnown RBP31.04■■■□□ 2.56
SRSF1-206ENST00000583741 UPF1Q92900 1129 aaKnown RBP eCLIP31.03■■■□□ 2.561e-28■□□□□ 8.2
SRSF1-206ENST00000583741 RRBP1Q9P2E9 1410 aaKnown RBP31.03■■■□□ 2.56
SRSF1-206ENST00000583741 AFF2P51816 1311 aa31.02■■■□□ 2.56
SRSF1-206ENST00000583741 RXRBP28702 533 aa31.01■■■□□ 2.56
SRSF1-206ENST00000583741 LRRC59Q96AG4 307 aaKnown RBP31■■■□□ 2.55
SRSF1-206ENST00000583741 PNPLA6Q8IY17 1366 aa31■■■□□ 2.55
SRSF1-206ENST00000583741 CDK12Q9NYV4 1490 aaPredicted RBP30.99■■■□□ 2.55
SRSF1-206ENST00000583741 PTCH1Q13635 1447 aa30.98■■■□□ 2.55
SRSF1-206ENST00000583741 C1orf167Q5SNV9 1468 aa30.97■■■□□ 2.55
SRSF1-206ENST00000583741 LAMC1P11047 1609 aa30.96■■■□□ 2.55
SRSF1-206ENST00000583741 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.54
SRSF1-206ENST00000583741 C8orf37Q96NL8 207 aa30.93■■■□□ 2.54
SRSF1-206ENST00000583741 PPLO60437 1756 aa30.92■■■□□ 2.54
SRSF1-206ENST00000583741 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
SRSF1-206ENST00000583741 RGS12O14924 1447 aa30.89■■■□□ 2.54
SRSF1-206ENST00000583741 VGFO15240 615 aaPredicted RBP30.89■■■□□ 2.53
SRSF1-206ENST00000583741 HFM1A2PYH4 1435 aa30.88■■■□□ 2.53
SRSF1-206ENST00000583741 ORAI2Q96SN7 254 aa30.87■■■□□ 2.53
SRSF1-206ENST00000583741 QTRT2Q9H974 415 aaKnown RBP30.84■■■□□ 2.53
SRSF1-206ENST00000583741 SOS2Q07890 1332 aaPredicted RBP30.83■■■□□ 2.53
SRSF1-206ENST00000583741 RPGRIP1LQ68CZ1 1315 aa30.83■■■□□ 2.53
SRSF1-206ENST00000583741 ADAMTS2O95450 1211 aa30.82■■■□□ 2.53
SRSF1-206ENST00000583741 RBM6P78332 1123 aaKnown RBP30.82■■■□□ 2.52
SRSF1-206ENST00000583741 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
SRSF1-206ENST00000583741 NGLY1Q96IV0 654 aa30.78■■■□□ 2.52
SRSF1-206ENST00000583741 COL22A1Q8NFW1 1626 aaPredicted RBP30.78■■■□□ 2.52
SRSF1-206ENST00000583741 CDC42BPGQ6DT37 1551 aa30.77■■■□□ 2.52
SRSF1-206ENST00000583741 FOXD1Q16676 465 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms