RNA–Protein interactions for RNA: ENST00000583704.1

TTC19-210, Transcript of tetratricopeptide repeat domain 19, human

TSL 2

Gene TTC19, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-210	ENST00000583704	ZFYVE9	O95405	1425 aa		34.21	■■■■□ 3.07
TTC19-210	ENST00000583704	SOCS7	O14512	581 aa		34.2	■■■■□ 3.07
TTC19-210	ENST00000583704	SENP3	Q9H4L4	574 aa	Predicted RBP	34.19	■■■■□ 3.06
TTC19-210	ENST00000583704	KCNA6	P17658	529 aa		34.17	■■■■□ 3.06
TTC19-210	ENST00000583704	NWD1	Q149M9	1564 aa		34.16	■■■■□ 3.06
TTC19-210	ENST00000583704	RIMS2	Q9UQ26	1411 aa		34.16	■■■■□ 3.06
TTC19-210	ENST00000583704	BCAN	Q96GW7	911 aa		34.16	■■■■□ 3.06
TTC19-210	ENST00000583704	TMEM94	Q12767	1356 aa		34.15	■■■■□ 3.06
TTC19-210	ENST00000583704	NUP155	O75694	1391 aa		34.14	■■■■□ 3.06
TTC19-210	ENST00000583704	PLEKHG1	Q9ULL1	1385 aa		34.12	■■■■□ 3.05
TTC19-210	ENST00000583704	PPP1R15A	O75807	674 aa	Predicted RBP	34.11	■■■■□ 3.05
TTC19-210	ENST00000583704	NKTR	P30414	1462 aa	Known RBP	34.11	■■■■□ 3.05
TTC19-210	ENST00000583704	CHGA	P10645	457 aa	Known RBP	34.1	■■■■□ 3.05
TTC19-210	ENST00000583704	PROSER2	Q86WR7	435 aa	Predicted RBP	34.08	■■■■□ 3.05
TTC19-210	ENST00000583704	RBM33	Q96EV2	1170 aa	Known RBP	34.08	■■■■□ 3.05
TTC19-210	ENST00000583704	HDGF	P51858	240 aa	Known RBP	34.06	■■■■□ 3.04
TTC19-210	ENST00000583704	CHD2	O14647	1828 aa	Known RBP	34.05	■■■■□ 3.04
TTC19-210	ENST00000583704	RRBP1	Q9P2E9	1410 aa	Known RBP	34.03	■■■■□ 3.04
TTC19-210	ENST00000583704	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.01	■■■■□ 3.03
TTC19-210	ENST00000583704	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.01	■■■■□ 3.03
TTC19-210	ENST00000583704	SPHKAP	Q2M3C7	1700 aa		34.01	■■■■□ 3.03
TTC19-210	ENST00000583704	FAM135B	Q49AJ0	1406 aa		34	■■■■□ 3.03
TTC19-210	ENST00000583704	ROBO1	Q9Y6N7	1651 aa		33.99	■■■■□ 3.03
TTC19-210	ENST00000583704	DIP2A	Q14689	1571 aa		33.96	■■■■□ 3.03
TTC19-210	ENST00000583704	ADAMTS13	Q76LX8	1427 aa		33.96	■■■■□ 3.03
TTC19-210	ENST00000583704	TBX22	Q9Y458	520 aa		33.95	■■■■□ 3.03
TTC19-210	ENST00000583704	MSH6	P52701	1360 aa		33.95	■■■■□ 3.02
TTC19-210	ENST00000583704	PHF23	Q9BUL5	403 aa	Predicted RBP	33.94	■■■■□ 3.02
TTC19-210	ENST00000583704	NAIP	Q13075	1403 aa		33.9	■■■■□ 3.02
TTC19-210	ENST00000583704	TRPM2	O94759	1503 aa		33.85	■■■■□ 3.01
TTC19-210	ENST00000583704	CLTCL1	P53675	1640 aa		33.84	■■■■□ 3.01
TTC19-210	ENST00000583704	PIK3R4	Q99570	1358 aa		33.84	■■■■□ 3.01
TTC19-210	ENST00000583704	NRXN3	Q9Y4C0	1643 aa		33.83	■■■■□ 3.01
TTC19-210	ENST00000583704	NCOA3	Q9Y6Q9	1424 aa		33.81	■■■■□ 3
TTC19-210	ENST00000583704	SLAIN2	Q9P270	581 aa		33.81	■■■■□ 3
TTC19-210	ENST00000583704	ZNF326	Q5BKZ1	582 aa	Known RBP	33.79	■■■■□ 3
TTC19-210	ENST00000583704	SETBP1	Q9Y6X0	1596 aa		33.79	■■■■□ 3
TTC19-210	ENST00000583704	PTPRU	Q92729	1446 aa		33.79	■■■■□ 3
TTC19-210	ENST00000583704	C14orf37	Q86TY3	774 aa		33.78	■■■■□ 3
TTC19-210	ENST00000583704	PHLPP1	O60346	1717 aa		33.78	■■■■□ 3
TTC19-210	ENST00000583704	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.77	■■■■□ 3
TTC19-210	ENST00000583704	HFM1	A2PYH4	1435 aa		33.77	■■■■□ 3
TTC19-210	ENST00000583704	KIF1B	O60333	1816 aa		33.74	■■■□□ 2.99
TTC19-210	ENST00000583704	AMOTL2	Q9Y2J4	779 aa		33.74	■■■□□ 2.99
TTC19-210	ENST00000583704	NEXMIF	Q5QGS0	1516 aa		33.74	■■■□□ 2.99
TTC19-210	ENST00000583704	XRN1	Q8IZH2	1706 aa	Known RBP	33.73	■■■□□ 2.99
TTC19-210	ENST00000583704	TRIM52	Q96A61	297 aa		33.7	■■■□□ 2.99
TTC19-210	ENST00000583704	C19orf44	Q9H6X5	657 aa		33.69	■■■□□ 2.98
TTC19-210	ENST00000583704	RGS17	Q9UGC6	210 aa	Predicted RBP	33.69	■■■□□ 2.98
TTC19-210	ENST00000583704	CADPS2	Q86UW7	1296 aa		33.67	■■■□□ 2.98
TTC19-210	ENST00000583704	COL16A1	Q07092	1604 aa	Predicted RBP	33.67	■■■□□ 2.98
TTC19-210	ENST00000583704	MET	P08581	1390 aa		33.66	■■■□□ 2.98
TTC19-210	ENST00000583704	ATF3	P18847	181 aa		33.65	■■■□□ 2.98
TTC19-210	ENST00000583704	JCAD	Q9P266	1359 aa		33.61	■■■□□ 2.97
TTC19-210	ENST00000583704	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.6	■■■□□ 2.97
TTC19-210	ENST00000583704	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.59	■■■□□ 2.97
TTC19-210	ENST00000583704	DCC	P43146	1447 aa		33.58	■■■□□ 2.97
TTC19-210	ENST00000583704	SETD1A	O15047	1707 aa	Known RBP	33.53	■■■□□ 2.96
TTC19-210	ENST00000583704	BRINP3	Q76B58	766 aa		33.52	■■■□□ 2.96
TTC19-210	ENST00000583704	NALCN	Q8IZF0	1738 aa		33.51	■■■□□ 2.96
TTC19-210	ENST00000583704	PPL	O60437	1756 aa		33.51	■■■□□ 2.95
TTC19-210	ENST00000583704	POTEA	Q6S8J7	498 aa		33.5	■■■□□ 2.95
TTC19-210	ENST00000583704	MST1R	Q04912	1400 aa		33.49	■■■□□ 2.95
TTC19-210	ENST00000583704	FOXD1	Q16676	465 aa		33.49	■■■□□ 2.95
TTC19-210	ENST00000583704	ADGRL3	Q9HAR2	1447 aa		33.49	■■■□□ 2.95
TTC19-210	ENST00000583704	SHPRH	Q149N8	1683 aa		33.48	■■■□□ 2.95
TTC19-210	ENST00000583704	ASXL1	Q8IXJ9	1541 aa		33.48	■■■□□ 2.95
TTC19-210	ENST00000583704	VGF	O15240	615 aa	Predicted RBP	33.48	■■■□□ 2.95
TTC19-210	ENST00000583704	LRP6	O75581	1613 aa		33.46	■■■□□ 2.95
TTC19-210	ENST00000583704	RPGRIP1L	Q68CZ1	1315 aa		33.45	■■■□□ 2.95
TTC19-210	ENST00000583704	SPATA31A6	Q5VVP1	1343 aa		33.43	■■■□□ 2.94
TTC19-210	ENST00000583704	PTCH1	Q13635	1447 aa		33.43	■■■□□ 2.94
TTC19-210	ENST00000583704	NHSL1	Q5SYE7	1610 aa		33.42	■■■□□ 2.94
TTC19-210	ENST00000583704	CCDC144A	A2RUR9	1427 aa		33.39	■■■□□ 2.94
TTC19-210	ENST00000583704	ROBO2	Q9HCK4	1378 aa		33.38	■■■□□ 2.93
TTC19-210	ENST00000583704	MEX3C	Q5U5Q3	659 aa	Known RBP	33.35	■■■□□ 2.93
TTC19-210	ENST00000583704	MPHOSPH9	Q99550	1183 aa		33.35	■■■□□ 2.93
TTC19-210	ENST00000583704	PRAG1	Q86YV5	1406 aa		33.35	■■■□□ 2.93
TTC19-210	ENST00000583704	SETD5	Q9C0A6	1442 aa		33.33	■■■□□ 2.93
TTC19-210	ENST00000583704	IFT172	Q9UG01	1749 aa		33.32	■■■□□ 2.92
TTC19-210	ENST00000583704	SPATA31E1	Q6ZUB1	1445 aa		33.31	■■■□□ 2.92
TTC19-210	ENST00000583704	C1orf167	Q5SNV9	1468 aa		33.31	■■■□□ 2.92
TTC19-210	ENST00000583704	DDX17	Q92841	729 aa	Known RBP	33.3	■■■□□ 2.92
TTC19-210	ENST00000583704	RGL3	Q3MIN7	710 aa		33.29	■■■□□ 2.92
TTC19-210	ENST00000583704	ADGRF5	Q8IZF2	1346 aa		33.28	■■■□□ 2.92
TTC19-210	ENST00000583704	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.26	■■■□□ 2.91
TTC19-210	ENST00000583704	NUTM2E	B1AL46	878 aa	Predicted RBP	33.26	■■■□□ 2.91
TTC19-210	ENST00000583704	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.26	■■■□□ 2.91
TTC19-210	ENST00000583704	LRRC59	Q96AG4	307 aa	Known RBP	33.24	■■■□□ 2.91
TTC19-210	ENST00000583704	ANKRD30B	Q9BXX2	1392 aa		33.22	■■■□□ 2.91
TTC19-210	ENST00000583704	LAMC1	P11047	1609 aa		33.22	■■■□□ 2.91
TTC19-210	ENST00000583704	ZNF772	Q68DY9	489 aa	Predicted RBP	33.21	■■■□□ 2.91
TTC19-210	ENST00000583704	PNPLA6	Q8IY17	1366 aa		33.2	■■■□□ 2.9
TTC19-210	ENST00000583704	CDC42BPG	Q6DT37	1551 aa		33.18	■■■□□ 2.9
TTC19-210	ENST00000583704	ORAI2	Q96SN7	254 aa		33.18	■■■□□ 2.9
TTC19-210	ENST00000583704	PIK3C2G	O75747	1445 aa		33.17	■■■□□ 2.9
TTC19-210	ENST00000583704	KNDC1	Q76NI1	1749 aa		33.15	■■■□□ 2.9
TTC19-210	ENST00000583704	TECPR2	O15040	1411 aa		33.14	■■■□□ 2.9
TTC19-210	ENST00000583704	ACIN1	Q9UKV3	1341 aa	Known RBP	33.14	■■■□□ 2.9
TTC19-210	ENST00000583704	STK26	Q9P289	416 aa		33.14	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms