RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
CDK5RAP3-229ENST00000583697 BCANQ96GW7 911 aa13.35□□□□□ -0.27
CDK5RAP3-229ENST00000583697 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-229ENST00000583697 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
CDK5RAP3-229ENST00000583697 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
CDK5RAP3-229ENST00000583697 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
CDK5RAP3-229ENST00000583697 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
CDK5RAP3-229ENST00000583697 PPP1R15AO75807 674 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-229ENST00000583697 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
CDK5RAP3-229ENST00000583697 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
CDK5RAP3-229ENST00000583697 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.27
CDK5RAP3-229ENST00000583697 ITGAEP38570 1179 aa13.33□□□□□ -0.28
CDK5RAP3-229ENST00000583697 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-229ENST00000583697 CHD2O14647 1828 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-229ENST00000583697 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-229ENST00000583697 KCNA6P17658 529 aa13.31□□□□□ -0.28
CDK5RAP3-229ENST00000583697 HDGFP51858 240 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-229ENST00000583697 NUP155O75694 1391 aa13.31□□□□□ -0.28
CDK5RAP3-229ENST00000583697 MSH6P52701 1360 aa13.3□□□□□ -0.28
CDK5RAP3-229ENST00000583697 TRPM2O94759 1503 aa13.29□□□□□ -0.28
CDK5RAP3-229ENST00000583697 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-229ENST00000583697 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-229ENST00000583697 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-229ENST00000583697 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
CDK5RAP3-229ENST00000583697 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
CDK5RAP3-229ENST00000583697 RRBP1Q9P2E9 1410 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-229ENST00000583697 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-229ENST00000583697 KIF1BO60333 1816 aa13.25□□□□□ -0.29
CDK5RAP3-229ENST00000583697 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
CDK5RAP3-229ENST00000583697 ADAMTS13Q76LX8 1427 aa13.24□□□□□ -0.29
CDK5RAP3-229ENST00000583697 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
CDK5RAP3-229ENST00000583697 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
CDK5RAP3-229ENST00000583697 PIK3R4Q99570 1358 aa13.23□□□□□ -0.29
CDK5RAP3-229ENST00000583697 XRN1Q8IZH2 1706 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-229ENST00000583697 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-229ENST00000583697 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-229ENST00000583697 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
CDK5RAP3-229ENST00000583697 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
CDK5RAP3-229ENST00000583697 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
CDK5RAP3-229ENST00000583697 NAIPQ13075 1403 aa13.21□□□□□ -0.3
CDK5RAP3-229ENST00000583697 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP3-229ENST00000583697 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
CDK5RAP3-229ENST00000583697 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-229ENST00000583697 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-229ENST00000583697 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
CDK5RAP3-229ENST00000583697 DCCP43146 1447 aa13.17□□□□□ -0.3
CDK5RAP3-229ENST00000583697 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
CDK5RAP3-229ENST00000583697 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
CDK5RAP3-229ENST00000583697 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
CDK5RAP3-229ENST00000583697 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
CDK5RAP3-229ENST00000583697 JCADQ9P266 1359 aa13.16□□□□□ -0.3
CDK5RAP3-229ENST00000583697 ATF3P18847 181 aa13.15□□□□□ -0.3
CDK5RAP3-229ENST00000583697 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
CDK5RAP3-229ENST00000583697 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-229ENST00000583697 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
CDK5RAP3-229ENST00000583697 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CDK5RAP3-229ENST00000583697 PPLO60437 1756 aa13.13□□□□□ -0.31
CDK5RAP3-229ENST00000583697 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
CDK5RAP3-229ENST00000583697 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
CDK5RAP3-229ENST00000583697 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
CDK5RAP3-229ENST00000583697 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
CDK5RAP3-229ENST00000583697 METP08581 1390 aa13.1□□□□□ -0.31
CDK5RAP3-229ENST00000583697 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-229ENST00000583697 LRP6O75581 1613 aa13.1□□□□□ -0.31
CDK5RAP3-229ENST00000583697 MST1RQ04912 1400 aa13.09□□□□□ -0.31
CDK5RAP3-229ENST00000583697 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
CDK5RAP3-229ENST00000583697 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-229ENST00000583697 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
CDK5RAP3-229ENST00000583697 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
CDK5RAP3-229ENST00000583697 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-229ENST00000583697 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
CDK5RAP3-229ENST00000583697 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
CDK5RAP3-229ENST00000583697 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-229ENST00000583697 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
CDK5RAP3-229ENST00000583697 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
CDK5RAP3-229ENST00000583697 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
CDK5RAP3-229ENST00000583697 KNDC1Q76NI1 1749 aa13.04□□□□□ -0.32
CDK5RAP3-229ENST00000583697 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
CDK5RAP3-229ENST00000583697 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
CDK5RAP3-229ENST00000583697 LAMC1P11047 1609 aa13.02□□□□□ -0.32
CDK5RAP3-229ENST00000583697 C1orf167Q5SNV9 1468 aa13□□□□□ -0.33
CDK5RAP3-229ENST00000583697 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
CDK5RAP3-229ENST00000583697 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-229ENST00000583697 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-229ENST00000583697 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-229ENST00000583697 FOXD1Q16676 465 aa12.99□□□□□ -0.33
CDK5RAP3-229ENST00000583697 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-229ENST00000583697 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-229ENST00000583697 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
CDK5RAP3-229ENST00000583697 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
CDK5RAP3-229ENST00000583697 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
CDK5RAP3-229ENST00000583697 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-229ENST00000583697 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-229ENST00000583697 TECPR2O15040 1411 aa12.96□□□□□ -0.34
CDK5RAP3-229ENST00000583697 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
CDK5RAP3-229ENST00000583697 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-229ENST00000583697 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
CDK5RAP3-229ENST00000583697 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
CDK5RAP3-229ENST00000583697 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
CDK5RAP3-229ENST00000583697 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms