RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ZFYVE9O95405 1425 aa37.67■■■■□ 3.62
TSEN54-209ENST00000583454 SOCS7O14512 581 aa37.66■■■■□ 3.62
TSEN54-209ENST00000583454 NWD1Q149M9 1564 aa37.64■■■■□ 3.62
TSEN54-209ENST00000583454 SLC26A8Q96RN1 970 aa37.6■■■■□ 3.61
TSEN54-209ENST00000583454 KCNA6P17658 529 aa37.57■■■■□ 3.6
TSEN54-209ENST00000583454 TMEM94Q12767 1356 aa37.55■■■■□ 3.6
TSEN54-209ENST00000583454 RIMS2Q9UQ26 1411 aa37.55■■■■□ 3.6
TSEN54-209ENST00000583454 CHD2O14647 1828 aaKnown RBP37.54■■■■□ 3.6
TSEN54-209ENST00000583454 NKTRP30414 1462 aaKnown RBP37.54■■■■□ 3.6
TSEN54-209ENST00000583454 PLEKHG1Q9ULL1 1385 aa37.53■■■■□ 3.6
TSEN54-209ENST00000583454 NUP155O75694 1391 aa37.49■■■■□ 3.59
TSEN54-209ENST00000583454 NAIPQ13075 1403 aa37.48■■■■□ 3.59
TSEN54-209ENST00000583454 HFM1A2PYH4 1435 aa37.44■■■■□ 3.58
TSEN54-209ENST00000583454 SENP3Q9H4L4 574 aaPredicted RBP37.44■■■■□ 3.58
TSEN54-209ENST00000583454 RBM33Q96EV2 1170 aaKnown RBP37.43■■■■□ 3.58
TSEN54-209ENST00000583454 FAM135BQ49AJ0 1406 aa37.43■■■■□ 3.58
TSEN54-209ENST00000583454 SPHKAPQ2M3C7 1700 aa37.42■■■■□ 3.58
TSEN54-209ENST00000583454 PROSER2Q86WR7 435 aaPredicted RBP37.42■■■■□ 3.58
TSEN54-209ENST00000583454 ROBO1Q9Y6N7 1651 aa37.41■■■■□ 3.58
TSEN54-209ENST00000583454 ADAMTS13Q76LX8 1427 aa37.4■■■■□ 3.58
TSEN54-209ENST00000583454 BCANQ96GW7 911 aa37.38■■■■□ 3.57
TSEN54-209ENST00000583454 PPP1R15AO75807 674 aaPredicted RBP37.37■■■■□ 3.57
TSEN54-209ENST00000583454 DIP2AQ14689 1571 aa37.37■■■■□ 3.57
TSEN54-209ENST00000583454 CHGAP10645 457 aaKnown RBP37.36■■■■□ 3.57
TSEN54-209ENST00000583454 HDGFP51858 240 aaKnown RBP37.35■■■■□ 3.57
TSEN54-209ENST00000583454 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.34■■■■□ 3.57
TSEN54-209ENST00000583454 TBX22Q9Y458 520 aa37.34■■■■□ 3.57
TSEN54-209ENST00000583454 NUTM2DQ5VT03 806 aaPredicted RBP37.31■■■■□ 3.56
TSEN54-209ENST00000583454 NRXN3Q9Y4C0 1643 aa37.28■■■■□ 3.56
TSEN54-209ENST00000583454 MSH6P52701 1360 aa37.28■■■■□ 3.56
TSEN54-209ENST00000583454 PIK3R4Q99570 1358 aa37.24■■■■□ 3.55
TSEN54-209ENST00000583454 CLTCL1P53675 1640 aa37.24■■■■□ 3.55
TSEN54-209ENST00000583454 TRPM2O94759 1503 aa37.22■■■■□ 3.55
TSEN54-209ENST00000583454 NCOA3Q9Y6Q9 1424 aa37.22■■■■□ 3.55
TSEN54-209ENST00000583454 PHF23Q9BUL5 403 aaPredicted RBP37.21■■■■□ 3.55
TSEN54-209ENST00000583454 SETBP1Q9Y6X0 1596 aa37.21■■■■□ 3.55
TSEN54-209ENST00000583454 PTPRUQ92729 1446 aa37.19■■■■□ 3.54
TSEN54-209ENST00000583454 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.19■■■■□ 3.54
TSEN54-209ENST00000583454 XRN1Q8IZH2 1706 aaKnown RBP37.18■■■■□ 3.54
TSEN54-209ENST00000583454 PHLPP1O60346 1717 aa37.17■■■■□ 3.54
TSEN54-209ENST00000583454 SLAIN2Q9P270 581 aa37.16■■■■□ 3.54
TSEN54-209ENST00000583454 NEXMIFQ5QGS0 1516 aa37.14■■■■□ 3.54
TSEN54-209ENST00000583454 RGS17Q9UGC6 210 aaPredicted RBP37.13■■■■□ 3.53
TSEN54-209ENST00000583454 KIF1BO60333 1816 aa37.13■■■■□ 3.53
TSEN54-209ENST00000583454 SETD5Q9C0A6 1442 aa37.12■■■■□ 3.53
TSEN54-209ENST00000583454 TRIM52Q96A61 297 aa37.11■■■■□ 3.53
TSEN54-209ENST00000583454 COL16A1Q07092 1604 aaPredicted RBP37.1■■■■□ 3.53
TSEN54-209ENST00000583454 AMOTL2Q9Y2J4 779 aa37.06■■■■□ 3.52
TSEN54-209ENST00000583454 ACIN1Q9UKV3 1341 aaKnown RBP37.04■■■■□ 3.52
TSEN54-209ENST00000583454 ZNF326Q5BKZ1 582 aaKnown RBP37.02■■■■□ 3.52
TSEN54-209ENST00000583454 C19orf44Q9H6X5 657 aa37.02■■■■□ 3.52
TSEN54-209ENST00000583454 METP08581 1390 aa37.02■■■■□ 3.52
TSEN54-209ENST00000583454 AHDC1Q5TGY3 1603 aaPredicted RBP37■■■■□ 3.51
TSEN54-209ENST00000583454 C14orf37Q86TY3 774 aa36.99■■■■□ 3.51
TSEN54-209ENST00000583454 RAB3GAP2Q9H2M9 1393 aa36.99■■■■□ 3.51
TSEN54-209ENST00000583454 SETD1AO15047 1707 aaKnown RBP36.99■■■■□ 3.51
TSEN54-209ENST00000583454 CADPS2Q86UW7 1296 aa36.98■■■■□ 3.51
TSEN54-209ENST00000583454 SLC4A1APQ9BWU0 796 aaKnown RBP36.98■■■■□ 3.51
TSEN54-209ENST00000583454 DCCP43146 1447 aa36.96■■■■□ 3.51
TSEN54-209ENST00000583454 JCADQ9P266 1359 aa36.95■■■■□ 3.51
TSEN54-209ENST00000583454 ATF3P18847 181 aa36.92■■■■□ 3.5
TSEN54-209ENST00000583454 HRCP23327 699 aa36.92■■■■□ 3.5
TSEN54-209ENST00000583454 NALCNQ8IZF0 1738 aa36.91■■■■□ 3.5
TSEN54-209ENST00000583454 PPLO60437 1756 aa36.91■■■■□ 3.5
TSEN54-209ENST00000583454 MPHOSPH9Q99550 1183 aa36.9■■■■□ 3.5
TSEN54-209ENST00000583454 SHPRHQ149N8 1683 aa36.9■■■■□ 3.5
TSEN54-209ENST00000583454 POTEAQ6S8J7 498 aa36.87■■■■□ 3.49
TSEN54-209ENST00000583454 MST1RQ04912 1400 aa36.86■■■■□ 3.49
TSEN54-209ENST00000583454 LRP6O75581 1613 aa36.85■■■■□ 3.49
TSEN54-209ENST00000583454 BRINP3Q76B58 766 aa36.85■■■■□ 3.49
TSEN54-209ENST00000583454 NHSL1Q5SYE7 1610 aa36.85■■■■□ 3.49
TSEN54-209ENST00000583454 ASXL1Q8IXJ9 1541 aa36.85■■■■□ 3.49
TSEN54-209ENST00000583454 ADGRL3Q9HAR2 1447 aa36.84■■■■□ 3.49
TSEN54-209ENST00000583454 PRAG1Q86YV5 1406 aa36.78■■■■□ 3.48
TSEN54-209ENST00000583454 PTCH1Q13635 1447 aa36.77■■■■□ 3.48
TSEN54-209ENST00000583454 FOXD1Q16676 465 aa36.77■■■■□ 3.48
TSEN54-209ENST00000583454 SPATA31A6Q5VVP1 1343 aa36.76■■■■□ 3.47
TSEN54-209ENST00000583454 RPGRIP1LQ68CZ1 1315 aa36.76■■■■□ 3.47
TSEN54-209ENST00000583454 VGFO15240 615 aaPredicted RBP36.75■■■■□ 3.47
TSEN54-209ENST00000583454 TRIM26Q12899 539 aaPredicted RBP36.74■■■■□ 3.47
TSEN54-209ENST00000583454 IFT172Q9UG01 1749 aa36.73■■■■□ 3.47
TSEN54-209ENST00000583454 ROBO2Q9HCK4 1378 aa36.71■■■■□ 3.47
TSEN54-209ENST00000583454 SPATA31E1Q6ZUB1 1445 aa36.68■■■■□ 3.46
TSEN54-209ENST00000583454 LAMC1P11047 1609 aa36.67■■■■□ 3.46
TSEN54-209ENST00000583454 CCDC144AA2RUR9 1427 aa36.64■■■■□ 3.46
TSEN54-209ENST00000583454 C1orf167Q5SNV9 1468 aa36.63■■■■□ 3.45
TSEN54-209ENST00000583454 DDX17Q92841 729 aaKnown RBP36.59■■■■□ 3.45
TSEN54-209ENST00000583454 ADGRF5Q8IZF2 1346 aa36.59■■■■□ 3.45
TSEN54-209ENST00000583454 MEX3CQ5U5Q3 659 aaKnown RBP36.54■■■■□ 3.44
TSEN54-209ENST00000583454 CDC42BPGQ6DT37 1551 aa36.53■■■■□ 3.44
TSEN54-209ENST00000583454 PNPLA6Q8IY17 1366 aa36.53■■■■□ 3.44
TSEN54-209ENST00000583454 ANKRD30BQ9BXX2 1392 aa36.52■■■■□ 3.44
TSEN54-209ENST00000583454 KNDC1Q76NI1 1749 aa36.51■■■■□ 3.44
TSEN54-209ENST00000583454 LRRC59Q96AG4 307 aaKnown RBP36.51■■■■□ 3.44
TSEN54-209ENST00000583454 TECPR2O15040 1411 aa36.51■■■■□ 3.43
TSEN54-209ENST00000583454 RGL3Q3MIN7 710 aa36.49■■■■□ 3.43
TSEN54-209ENST00000583454 PIK3C2GO75747 1445 aa36.49■■■■□ 3.43
TSEN54-209ENST00000583454 NUTM2BA6NNL0 878 aaPredicted RBP36.48■■■■□ 3.43
TSEN54-209ENST00000583454 NUTM2EB1AL46 878 aaPredicted RBP36.48■■■■□ 3.43
TSEN54-209ENST00000583454 ZNF772Q68DY9 489 aaPredicted RBP36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms