RNA–Protein interactions for RNA: ENST00000583410.1

ARHGAP28-213, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-213ENST00000583410 SLC52A1Q9NWF4 448 aa28.48■■■□□ 2.15
ARHGAP28-213ENST00000583410 GCC2Q8IWJ2 1684 aa28.48■■■□□ 2.15
ARHGAP28-213ENST00000583410 NKTRP30414 1462 aaKnown RBP28.47■■■□□ 2.15
ARHGAP28-213ENST00000583410 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
ARHGAP28-213ENST00000583410 POTEAQ6S8J7 498 aa28.46■■■□□ 2.15
ARHGAP28-213ENST00000583410 BCANQ96GW7 911 aa28.44■■■□□ 2.14
ARHGAP28-213ENST00000583410 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
ARHGAP28-213ENST00000583410 RPRD2Q5VT52 1461 aaKnown RBP28.43■■■□□ 2.14
ARHGAP28-213ENST00000583410 FAM50AQ14320 339 aaKnown RBP28.43■■■□□ 2.14
ARHGAP28-213ENST00000583410 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
ARHGAP28-213ENST00000583410 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
ARHGAP28-213ENST00000583410 RIMS2Q9UQ26 1411 aa28.4■■■□□ 2.14
ARHGAP28-213ENST00000583410 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
ARHGAP28-213ENST00000583410 MSH6P52701 1360 aa28.38■■■□□ 2.13
ARHGAP28-213ENST00000583410 SLAIN2Q9P270 581 aa28.38■■■□□ 2.13
ARHGAP28-213ENST00000583410 UNC13BO14795 1591 aa28.35■■■□□ 2.13
ARHGAP28-213ENST00000583410 E9PCH4 1651 aa28.35■■■□□ 2.13
ARHGAP28-213ENST00000583410 PPP1R15AO75807 674 aaPredicted RBP28.32■■■□□ 2.12
ARHGAP28-213ENST00000583410 NUTM2DQ5VT03 806 aaPredicted RBP28.31■■■□□ 2.12
ARHGAP28-213ENST00000583410 SETD1AO15047 1707 aaKnown RBP28.3■■■□□ 2.12
ARHGAP28-213ENST00000583410 COL16A1Q07092 1604 aaPredicted RBP28.3■■■□□ 2.12
ARHGAP28-213ENST00000583410 TBX22Q9Y458 520 aa28.3■■■□□ 2.12
ARHGAP28-213ENST00000583410 ADAMTS13Q76LX8 1427 aa28.29■■■□□ 2.12
ARHGAP28-213ENST00000583410 CHGAP10645 457 aaKnown RBP28.28■■■□□ 2.12
ARHGAP28-213ENST00000583410 JCADQ9P266 1359 aa28.27■■■□□ 2.12
ARHGAP28-213ENST00000583410 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.27■■■□□ 2.12
ARHGAP28-213ENST00000583410 HDGFP51858 240 aaKnown RBP28.27■■■□□ 2.12
ARHGAP28-213ENST00000583410 IQGAP3Q86VI3 1631 aa28.24■■■□□ 2.11
ARHGAP28-213ENST00000583410 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
ARHGAP28-213ENST00000583410 NCOA3Q9Y6Q9 1424 aa28.23■■■□□ 2.11
ARHGAP28-213ENST00000583410 LRP6O75581 1613 aa28.21■■■□□ 2.11
ARHGAP28-213ENST00000583410 DIP2AQ14689 1571 aa28.2■■■□□ 2.11
ARHGAP28-213ENST00000583410 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
ARHGAP28-213ENST00000583410 PTPRUQ92729 1446 aa28.18■■■□□ 2.1
ARHGAP28-213ENST00000583410 ROCK1Q13464 1354 aa28.17■■■□□ 2.1
ARHGAP28-213ENST00000583410 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
ARHGAP28-213ENST00000583410 AHDC1Q5TGY3 1603 aaPredicted RBP28.16■■■□□ 2.1
ARHGAP28-213ENST00000583410 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
ARHGAP28-213ENST00000583410 SHPRHQ149N8 1683 aa28.14■■■□□ 2.1
ARHGAP28-213ENST00000583410 NRXN3Q9Y4C0 1643 aa28.14■■■□□ 2.09
ARHGAP28-213ENST00000583410 TRPM2O94759 1503 aa28.13■■■□□ 2.09
ARHGAP28-213ENST00000583410 NUP155O75694 1391 aa28.13■■■□□ 2.09
ARHGAP28-213ENST00000583410 CADPS2Q86UW7 1296 aa28.13■■■□□ 2.09
ARHGAP28-213ENST00000583410 AMOTL2Q9Y2J4 779 aa28.13■■■□□ 2.09
ARHGAP28-213ENST00000583410 ATF3P18847 181 aa28.12■■■□□ 2.09
ARHGAP28-213ENST00000583410 SPATA31A6Q5VVP1 1343 aa28.11■■■□□ 2.09
ARHGAP28-213ENST00000583410 XRN1Q8IZH2 1706 aaKnown RBP28.09■■■□□ 2.09
ARHGAP28-213ENST00000583410 ITGAEP38570 1179 aa28.08■■■□□ 2.09
ARHGAP28-213ENST00000583410 BRINP3Q76B58 766 aa28.08■■■□□ 2.09
ARHGAP28-213ENST00000583410 SPHKAPQ2M3C7 1700 aa28.07■■■□□ 2.08
ARHGAP28-213ENST00000583410 MEX3CQ5U5Q3 659 aaKnown RBP28.06■■■□□ 2.08
ARHGAP28-213ENST00000583410 SETBP1Q9Y6X0 1596 aa28.03■■■□□ 2.08
ARHGAP28-213ENST00000583410 ZNF772Q68DY9 489 aaPredicted RBP28.01■■■□□ 2.07
ARHGAP28-213ENST00000583410 TRIM52Q96A61 297 aa28.01■■■□□ 2.07
ARHGAP28-213ENST00000583410 ASXL1Q8IXJ9 1541 aa28■■■□□ 2.07
ARHGAP28-213ENST00000583410 DCCP43146 1447 aa28■■■□□ 2.07
ARHGAP28-213ENST00000583410 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
ARHGAP28-213ENST00000583410 METP08581 1390 aa27.99■■■□□ 2.07
ARHGAP28-213ENST00000583410 PPARGC1BQ86YN6 1023 aaKnown RBP27.99■■■□□ 2.07
ARHGAP28-213ENST00000583410 MST1RQ04912 1400 aa27.99■■■□□ 2.07
ARHGAP28-213ENST00000583410 NUTM2BA6NNL0 878 aaPredicted RBP27.98■■■□□ 2.07
ARHGAP28-213ENST00000583410 NUTM2EB1AL46 878 aaPredicted RBP27.98■■■□□ 2.07
ARHGAP28-213ENST00000583410 NUTM2AQ8IVF1 878 aaPredicted RBP27.98■■■□□ 2.07
ARHGAP28-213ENST00000583410 UPF1Q92900 1129 aaKnown RBP eCLIP27.97■■■□□ 2.07
ARHGAP28-213ENST00000583410 CLTCL1P53675 1640 aa27.96■■■□□ 2.07
ARHGAP28-213ENST00000583410 ZNF326Q5BKZ1 582 aaKnown RBP27.95■■■□□ 2.06
ARHGAP28-213ENST00000583410 SETD5Q9C0A6 1442 aa27.94■■■□□ 2.06
ARHGAP28-213ENST00000583410 NALCNQ8IZF0 1738 aa27.94■■■□□ 2.06
ARHGAP28-213ENST00000583410 NEXMIFQ5QGS0 1516 aa27.93■■■□□ 2.06
ARHGAP28-213ENST00000583410 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
ARHGAP28-213ENST00000583410 RXRBP28702 533 aa27.91■■■□□ 2.06
ARHGAP28-213ENST00000583410 AFF2P51816 1311 aa27.9■■■□□ 2.06
ARHGAP28-213ENST00000583410 KIF1BO60333 1816 aa27.89■■■□□ 2.06
ARHGAP28-213ENST00000583410 ADGRL3Q9HAR2 1447 aa27.89■■■□□ 2.06
ARHGAP28-213ENST00000583410 LRRC59Q96AG4 307 aaKnown RBP27.85■■■□□ 2.05
ARHGAP28-213ENST00000583410 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
ARHGAP28-213ENST00000583410 PNPLA6Q8IY17 1366 aa27.84■■■□□ 2.05
ARHGAP28-213ENST00000583410 C8orf37Q96NL8 207 aa27.8■■■□□ 2.04
ARHGAP28-213ENST00000583410 C1orf167Q5SNV9 1468 aa27.79■■■□□ 2.04
ARHGAP28-213ENST00000583410 LAMC1P11047 1609 aa27.78■■■□□ 2.04
ARHGAP28-213ENST00000583410 NAIPQ13075 1403 aa27.77■■■□□ 2.04
ARHGAP28-213ENST00000583410 QTRT2Q9H974 415 aaKnown RBP27.77■■■□□ 2.04
ARHGAP28-213ENST00000583410 RGS12O14924 1447 aa27.76■■■□□ 2.04
ARHGAP28-213ENST00000583410 ROBO2Q9HCK4 1378 aa27.76■■■□□ 2.03
ARHGAP28-213ENST00000583410 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
ARHGAP28-213ENST00000583410 PTCH1Q13635 1447 aa27.74■■■□□ 2.03
ARHGAP28-213ENST00000583410 ADAMTS2O95450 1211 aa27.72■■■□□ 2.03
ARHGAP28-213ENST00000583410 RBM6P78332 1123 aaKnown RBP27.72■■■□□ 2.03
ARHGAP28-213ENST00000583410 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
ARHGAP28-213ENST00000583410 PPLO60437 1756 aa27.71■■■□□ 2.03
ARHGAP28-213ENST00000583410 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
ARHGAP28-213ENST00000583410 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
ARHGAP28-213ENST00000583410 NGLY1Q96IV0 654 aa27.68■■■□□ 2.02
ARHGAP28-213ENST00000583410 PRAG1Q86YV5 1406 aa27.67■■■□□ 2.02
ARHGAP28-213ENST00000583410 COL22A1Q8NFW1 1626 aaPredicted RBP27.62■■■□□ 2.01
ARHGAP28-213ENST00000583410 RPGRIP1LQ68CZ1 1315 aa27.62■■■□□ 2.01
ARHGAP28-213ENST00000583410 HFM1A2PYH4 1435 aa27.6■■■□□ 2.01
ARHGAP28-213ENST00000583410 USP21Q9UK80 565 aa27.6■■■□□ 2.01
ARHGAP28-213ENST00000583410 SLC4A1APQ9BWU0 796 aaKnown RBP27.58■■■□□ 2.01
ARHGAP28-213ENST00000583410 FNBP4Q8N3X1 1017 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms