RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 MAGI2Q86UL8 1455 aa13.59□□□□□ -0.23
TOP3A-214ENST00000582981 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
TOP3A-214ENST00000582981 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
TOP3A-214ENST00000582981 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
TOP3A-214ENST00000582981 POGKQ9P215 609 aa13.59□□□□□ -0.23
TOP3A-214ENST00000582981 ABCA8O94911 1581 aa13.58□□□□□ -0.24
TOP3A-214ENST00000582981 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-214ENST00000582981 PANK1Q8TE04 598 aa13.58□□□□□ -0.24
TOP3A-214ENST00000582981 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
TOP3A-214ENST00000582981 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
TOP3A-214ENST00000582981 E9PCH4 1651 aa13.57□□□□□ -0.24
TOP3A-214ENST00000582981 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
TOP3A-214ENST00000582981 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
TOP3A-214ENST00000582981 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
TOP3A-214ENST00000582981 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
TOP3A-214ENST00000582981 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
TOP3A-214ENST00000582981 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
TOP3A-214ENST00000582981 NUP160Q12769 1436 aa13.56□□□□□ -0.24
TOP3A-214ENST00000582981 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-214ENST00000582981 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-214ENST00000582981 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
TOP3A-214ENST00000582981 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
TOP3A-214ENST00000582981 IGHDP01880 384 aa13.55□□□□□ -0.24
TOP3A-214ENST00000582981 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-214ENST00000582981 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-214ENST00000582981 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
TOP3A-214ENST00000582981 SEC24BO95487 1268 aa13.54□□□□□ -0.24
TOP3A-214ENST00000582981 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
TOP3A-214ENST00000582981 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-214ENST00000582981 GPRASP1Q5JY77 1395 aa13.53□□□□□ -0.24
TOP3A-214ENST00000582981 SLFN5Q08AF3 891 aa13.52□□□□□ -0.24
TOP3A-214ENST00000582981 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.24
TOP3A-214ENST00000582981 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
TOP3A-214ENST00000582981 RRP9O43818 475 aaKnown RBP13.52□□□□□ -0.25
TOP3A-214ENST00000582981 WDR7Q9Y4E6 1490 aa13.51□□□□□ -0.25
TOP3A-214ENST00000582981 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
TOP3A-214ENST00000582981 KIF3BO15066 747 aa13.51□□□□□ -0.25
TOP3A-214ENST00000582981 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
TOP3A-214ENST00000582981 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
TOP3A-214ENST00000582981 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
TOP3A-214ENST00000582981 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-214ENST00000582981 TRAK1Q9UPV9 953 aa13.49□□□□□ -0.25
TOP3A-214ENST00000582981 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-214ENST00000582981 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
TOP3A-214ENST00000582981 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
TOP3A-214ENST00000582981 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-214ENST00000582981 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
TOP3A-214ENST00000582981 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
TOP3A-214ENST00000582981 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
TOP3A-214ENST00000582981 L1TD1Q5T7N2 865 aaKnown RBP13.48□□□□□ -0.25
TOP3A-214ENST00000582981 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
TOP3A-214ENST00000582981 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
TOP3A-214ENST00000582981 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
TOP3A-214ENST00000582981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.46□□□□□ -0.25
TOP3A-214ENST00000582981 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.26
TOP3A-214ENST00000582981 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
TOP3A-214ENST00000582981 RLBP1P12271 317 aa13.45□□□□□ -0.26
TOP3A-214ENST00000582981 PANK2Q9BZ23 570 aa13.45□□□□□ -0.26
TOP3A-214ENST00000582981 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
TOP3A-214ENST00000582981 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-214ENST00000582981 PREX2Q70Z35 1606 aa13.43□□□□□ -0.26
TOP3A-214ENST00000582981 MORC1Q86VD1 984 aa13.42□□□□□ -0.26
TOP3A-214ENST00000582981 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
TOP3A-214ENST00000582981 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
TOP3A-214ENST00000582981 XRCC6P12956 609 aaKnown RBP eCLIP13.41□□□□□ -0.26
TOP3A-214ENST00000582981 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
TOP3A-214ENST00000582981 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
TOP3A-214ENST00000582981 E9PSI1 815 aa13.41□□□□□ -0.26
TOP3A-214ENST00000582981 CLCN1P35523 988 aa13.4□□□□□ -0.26
TOP3A-214ENST00000582981 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
TOP3A-214ENST00000582981 TSR2Q969E8 191 aaKnown RBP13.4□□□□□ -0.26
TOP3A-214ENST00000582981 USP19O94966 1318 aa13.39□□□□□ -0.27
TOP3A-214ENST00000582981 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
TOP3A-214ENST00000582981 NKTRP30414 1462 aaKnown RBP13.39□□□□□ -0.27
TOP3A-214ENST00000582981 GGT6Q6P531 493 aa13.39□□□□□ -0.27
TOP3A-214ENST00000582981 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
TOP3A-214ENST00000582981 ATP10AO60312 1499 aa13.38□□□□□ -0.27
TOP3A-214ENST00000582981 MTHFSP49914 203 aa13.38□□□□□ -0.27
TOP3A-214ENST00000582981 CFAP65Q6ZU64 1925 aaKnown RBP13.38□□□□□ -0.27
TOP3A-214ENST00000582981 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
TOP3A-214ENST00000582981 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
TOP3A-214ENST00000582981 UNC13BO14795 1591 aa13.37□□□□□ -0.27
TOP3A-214ENST00000582981 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
TOP3A-214ENST00000582981 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-214ENST00000582981 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
TOP3A-214ENST00000582981 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
TOP3A-214ENST00000582981 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
TOP3A-214ENST00000582981 ARID3AQ99856 593 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 STK26Q9P289 416 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
TOP3A-214ENST00000582981 CHD1O14646 1710 aa13.35□□□□□ -0.27
TOP3A-214ENST00000582981 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
TOP3A-214ENST00000582981 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
TOP3A-214ENST00000582981 BECN1Q14457 450 aa13.34□□□□□ -0.27
TOP3A-214ENST00000582981 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
TOP3A-214ENST00000582981 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
TOP3A-214ENST00000582981 FBLN1P23142 703 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms