RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 MYOM2P54296 1465 aa13.09□□□□□ -0.31
PDLIM1P2-201ENST00000582923 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
PDLIM1P2-201ENST00000582923 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
PDLIM1P2-201ENST00000582923 SLIT1O75093 1534 aa13.08□□□□□ -0.31
PDLIM1P2-201ENST00000582923 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
PDLIM1P2-201ENST00000582923 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
PDLIM1P2-201ENST00000582923 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
PDLIM1P2-201ENST00000582923 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
PDLIM1P2-201ENST00000582923 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
PDLIM1P2-201ENST00000582923 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
PDLIM1P2-201ENST00000582923 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
PDLIM1P2-201ENST00000582923 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
PDLIM1P2-201ENST00000582923 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
PDLIM1P2-201ENST00000582923 SCAF11Q99590 1463 aaKnown RBP13.05□□□□□ -0.32
PDLIM1P2-201ENST00000582923 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1P2-201ENST00000582923 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDLIM1P2-201ENST00000582923 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
PDLIM1P2-201ENST00000582923 HDGFP51858 240 aaKnown RBP13.04□□□□□ -0.32
PDLIM1P2-201ENST00000582923 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P2-201ENST00000582923 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
PDLIM1P2-201ENST00000582923 LAMC1P11047 1609 aa13.02□□□□□ -0.32
PDLIM1P2-201ENST00000582923 IQGAP1P46940 1657 aa13.02□□□□□ -0.32
PDLIM1P2-201ENST00000582923 HSPA2P54652 639 aa13.02□□□□□ -0.33
PDLIM1P2-201ENST00000582923 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
PDLIM1P2-201ENST00000582923 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
PDLIM1P2-201ENST00000582923 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
PDLIM1P2-201ENST00000582923 ANKLE2Q86XL3 938 aa13.01□□□□□ -0.33
PDLIM1P2-201ENST00000582923 BCANQ96GW7 911 aa13.01□□□□□ -0.33
PDLIM1P2-201ENST00000582923 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
PDLIM1P2-201ENST00000582923 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
PDLIM1P2-201ENST00000582923 SETBP1Q9Y6X0 1596 aa13.01□□□□□ -0.33
PDLIM1P2-201ENST00000582923 TRPM1Q7Z4N2 1603 aa13□□□□□ -0.33
PDLIM1P2-201ENST00000582923 PLEKHG1Q9ULL1 1385 aa13□□□□□ -0.33
PDLIM1P2-201ENST00000582923 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
PDLIM1P2-201ENST00000582923 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
PDLIM1P2-201ENST00000582923 LTKP29376 864 aa12.99□□□□□ -0.33
PDLIM1P2-201ENST00000582923 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
PDLIM1P2-201ENST00000582923 RALGAPBQ86X10 1494 aa12.98□□□□□ -0.33
PDLIM1P2-201ENST00000582923 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1P2-201ENST00000582923 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
PDLIM1P2-201ENST00000582923 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
PDLIM1P2-201ENST00000582923 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.33
PDLIM1P2-201ENST00000582923 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
PDLIM1P2-201ENST00000582923 STRCQ7RTU9 1775 aa12.96□□□□□ -0.34
PDLIM1P2-201ENST00000582923 MED14O60244 1454 aa12.96□□□□□ -0.34
PDLIM1P2-201ENST00000582923 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
PDLIM1P2-201ENST00000582923 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
PDLIM1P2-201ENST00000582923 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
PDLIM1P2-201ENST00000582923 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
PDLIM1P2-201ENST00000582923 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
PDLIM1P2-201ENST00000582923 SLC26A8Q96RN1 970 aa12.92□□□□□ -0.34
PDLIM1P2-201ENST00000582923 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
PDLIM1P2-201ENST00000582923 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
PDLIM1P2-201ENST00000582923 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
PDLIM1P2-201ENST00000582923 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
PDLIM1P2-201ENST00000582923 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
PDLIM1P2-201ENST00000582923 METP08581 1390 aa12.89□□□□□ -0.35
PDLIM1P2-201ENST00000582923 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
PDLIM1P2-201ENST00000582923 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
PDLIM1P2-201ENST00000582923 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
PDLIM1P2-201ENST00000582923 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
PDLIM1P2-201ENST00000582923 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
PDLIM1P2-201ENST00000582923 PIK3R4Q99570 1358 aa12.87□□□□□ -0.35
PDLIM1P2-201ENST00000582923 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
PDLIM1P2-201ENST00000582923 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
PDLIM1P2-201ENST00000582923 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
PDLIM1P2-201ENST00000582923 LRPPRCP42704 1394 aaKnown RBP12.86□□□□□ -0.35
PDLIM1P2-201ENST00000582923 USP47Q96K76 1375 aa12.86□□□□□ -0.35
PDLIM1P2-201ENST00000582923 STK26Q9P289 416 aa12.86□□□□□ -0.35
PDLIM1P2-201ENST00000582923 CPS1P31327 1500 aa12.86□□□□□ -0.35
PDLIM1P2-201ENST00000582923 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P2-201ENST00000582923 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
PDLIM1P2-201ENST00000582923 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
PDLIM1P2-201ENST00000582923 PTPRUQ92729 1446 aa12.84□□□□□ -0.35
PDLIM1P2-201ENST00000582923 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
PDLIM1P2-201ENST00000582923 TECPR2O15040 1411 aa12.83□□□□□ -0.36
PDLIM1P2-201ENST00000582923 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
PDLIM1P2-201ENST00000582923 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
PDLIM1P2-201ENST00000582923 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
PDLIM1P2-201ENST00000582923 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDLIM1P2-201ENST00000582923 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
PDLIM1P2-201ENST00000582923 STRCP1A6NGW2 1772 aa12.8□□□□□ -0.36
PDLIM1P2-201ENST00000582923 KCNA6P17658 529 aa12.8□□□□□ -0.36
PDLIM1P2-201ENST00000582923 POGKQ9P215 609 aa12.8□□□□□ -0.36
PDLIM1P2-201ENST00000582923 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
PDLIM1P2-201ENST00000582923 ROBO2Q9HCK4 1378 aa12.8□□□□□ -0.36
PDLIM1P2-201ENST00000582923 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
PDLIM1P2-201ENST00000582923 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
PDLIM1P2-201ENST00000582923 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
PDLIM1P2-201ENST00000582923 ZNF335Q9H4Z2 1342 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P2-201ENST00000582923 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDLIM1P2-201ENST00000582923 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
PDLIM1P2-201ENST00000582923 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
PDLIM1P2-201ENST00000582923 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
PDLIM1P2-201ENST00000582923 HIRIP3Q9BW71 556 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1P2-201ENST00000582923 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
PDLIM1P2-201ENST00000582923 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
PDLIM1P2-201ENST00000582923 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
PDLIM1P2-201ENST00000582923 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1P2-201ENST00000582923 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms