RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
CDK5RAP3-225ENST00000582482 PTPRTO14522 1441 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 DEPDC5O75140 1603 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 KANK1Q14678 1352 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 PPRC1Q5VV67 1664 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TET3O43151 1660 aa14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 IQGAP1P46940 1657 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 NOS1P29475 1434 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ABCA6Q8N139 1617 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CARD14Q9BXL6 1004 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 LAMC1P11047 1609 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
CDK5RAP3-225ENST00000582482 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 NPATQ14207 1427 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 MYOM1P52179 1685 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 STK26Q9P289 416 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 YEATS2Q9ULM3 1422 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 KIF1BO60333 1816 aa14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP3-225ENST00000582482 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 APAF1O14727 1248 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 MLECQ14165 292 aa14.2□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CABP2Q9NPB3 220 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CENPJQ9HC77 1338 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 SYNMO15061 1565 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 IDI1Q13907 227 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ABCC3O15438 1527 aa14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 EIF3AQ14152 1382 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NPM2Q86SE8 214 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 MYOM2P54296 1465 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CDCA8Q53HL2 280 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MYO5BQ9ULV0 1848 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 PPLO60437 1756 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 BCAR3O75815 825 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 FBLN1P23142 703 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 CAMSAP1Q5T5Y3 1602 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
CDK5RAP3-225ENST00000582482 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
CDK5RAP3-225ENST00000582482 PDE3BQ13370 1112 aa14.1□□□□□ -0.15
CDK5RAP3-225ENST00000582482 ZNF521Q96K83 1311 aa14.1□□□□□ -0.15
CDK5RAP3-225ENST00000582482 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
CDK5RAP3-225ENST00000582482 TNNQ9UQP3 1299 aa14.09□□□□□ -0.15
CDK5RAP3-225ENST00000582482 RICTORQ6R327 1708 aa14.08□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MTHFSP49914 203 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms