RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDC42EP4-208ENST00000582303 TET3O43151 1660 aa22.36■■□□□ 1.17
CDC42EP4-208ENST00000582303 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
CDC42EP4-208ENST00000582303 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
CDC42EP4-208ENST00000582303 MSH6P52701 1360 aa22.33■■□□□ 1.17
CDC42EP4-208ENST00000582303 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
CDC42EP4-208ENST00000582303 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
CDC42EP4-208ENST00000582303 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
CDC42EP4-208ENST00000582303 TBX22Q9Y458 520 aa22.28■■□□□ 1.16
CDC42EP4-208ENST00000582303 NWD1Q149M9 1564 aa22.28■■□□□ 1.16
CDC42EP4-208ENST00000582303 UNC13BO14795 1591 aa22.27■■□□□ 1.16
CDC42EP4-208ENST00000582303 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
CDC42EP4-208ENST00000582303 NCOA3Q9Y6Q9 1424 aa22.25■■□□□ 1.15
CDC42EP4-208ENST00000582303 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
CDC42EP4-208ENST00000582303 GCC2Q8IWJ2 1684 aa22.25■■□□□ 1.15
CDC42EP4-208ENST00000582303 NUP155O75694 1391 aa22.25■■□□□ 1.15
CDC42EP4-208ENST00000582303 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
CDC42EP4-208ENST00000582303 PIK3R4Q99570 1358 aa22.23■■□□□ 1.15
CDC42EP4-208ENST00000582303 TMEM131LA2VDJ0 1609 aa22.22■■□□□ 1.15
CDC42EP4-208ENST00000582303 C14orf37Q86TY3 774 aa22.22■■□□□ 1.15
CDC42EP4-208ENST00000582303 ITGAEP38570 1179 aa22.2■■□□□ 1.14
CDC42EP4-208ENST00000582303 IQGAP3Q86VI3 1631 aa22.2■■□□□ 1.14
CDC42EP4-208ENST00000582303 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
CDC42EP4-208ENST00000582303 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
CDC42EP4-208ENST00000582303 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
CDC42EP4-208ENST00000582303 ATF3P18847 181 aa22.16■■□□□ 1.14
CDC42EP4-208ENST00000582303 C19orf44Q9H6X5 657 aa22.16■■□□□ 1.14
CDC42EP4-208ENST00000582303 JCADQ9P266 1359 aa22.15■■□□□ 1.14
CDC42EP4-208ENST00000582303 E9PCH4 1651 aa22.15■■□□□ 1.14
CDC42EP4-208ENST00000582303 RGS17Q9UGC6 210 aaPredicted RBP22.15■■□□□ 1.14
CDC42EP4-208ENST00000582303 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.13
CDC42EP4-208ENST00000582303 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
CDC42EP4-208ENST00000582303 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
CDC42EP4-208ENST00000582303 TRPM2O94759 1503 aa22.11■■□□□ 1.13
CDC42EP4-208ENST00000582303 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
CDC42EP4-208ENST00000582303 AMOTL2Q9Y2J4 779 aa22.1■■□□□ 1.13
CDC42EP4-208ENST00000582303 MYO5BQ9ULV0 1848 aa22.1■■□□□ 1.13
CDC42EP4-208ENST00000582303 SPATA31A6Q5VVP1 1343 aa22.07■■□□□ 1.12
CDC42EP4-208ENST00000582303 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
CDC42EP4-208ENST00000582303 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
CDC42EP4-208ENST00000582303 DCCP43146 1447 aa22.05■■□□□ 1.12
CDC42EP4-208ENST00000582303 POTEAQ6S8J7 498 aa22.04■■□□□ 1.12
CDC42EP4-208ENST00000582303 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
CDC42EP4-208ENST00000582303 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
CDC42EP4-208ENST00000582303 PTPRUQ92729 1446 aa21.99■■□□□ 1.11
CDC42EP4-208ENST00000582303 RRBP1Q9P2E9 1410 aaKnown RBP21.99■■□□□ 1.11
CDC42EP4-208ENST00000582303 ZNF772Q68DY9 489 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP4-208ENST00000582303 SPHKAPQ2M3C7 1700 aa21.99■■□□□ 1.11
CDC42EP4-208ENST00000582303 COL16A1Q07092 1604 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-208ENST00000582303 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-208ENST00000582303 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
CDC42EP4-208ENST00000582303 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-208ENST00000582303 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
CDC42EP4-208ENST00000582303 NAIPQ13075 1403 aa21.95■■□□□ 1.1
CDC42EP4-208ENST00000582303 METP08581 1390 aa21.93■■□□□ 1.1
CDC42EP4-208ENST00000582303 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
CDC42EP4-208ENST00000582303 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
CDC42EP4-208ENST00000582303 RPGRIP1LQ68CZ1 1315 aa21.91■■□□□ 1.1
CDC42EP4-208ENST00000582303 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
CDC42EP4-208ENST00000582303 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
CDC42EP4-208ENST00000582303 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
CDC42EP4-208ENST00000582303 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
CDC42EP4-208ENST00000582303 MST1RQ04912 1400 aa21.89■■□□□ 1.1
CDC42EP4-208ENST00000582303 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-208ENST00000582303 NEXMIFQ5QGS0 1516 aa21.89■■□□□ 1.09
CDC42EP4-208ENST00000582303 ASXL1Q8IXJ9 1541 aa21.89■■□□□ 1.09
CDC42EP4-208ENST00000582303 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
CDC42EP4-208ENST00000582303 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
CDC42EP4-208ENST00000582303 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
CDC42EP4-208ENST00000582303 LRP6O75581 1613 aa21.88■■□□□ 1.09
CDC42EP4-208ENST00000582303 NUTM2BA6NNL0 878 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-208ENST00000582303 NUTM2EB1AL46 878 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-208ENST00000582303 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-208ENST00000582303 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
CDC42EP4-208ENST00000582303 RXRBP28702 533 aa21.84■■□□□ 1.09
CDC42EP4-208ENST00000582303 KIF1BO60333 1816 aa21.83■■□□□ 1.09
CDC42EP4-208ENST00000582303 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
CDC42EP4-208ENST00000582303 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
CDC42EP4-208ENST00000582303 AFF2P51816 1311 aa21.78■■□□□ 1.08
CDC42EP4-208ENST00000582303 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
CDC42EP4-208ENST00000582303 NHSL1Q5SYE7 1610 aa21.77■■□□□ 1.08
CDC42EP4-208ENST00000582303 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.07
CDC42EP4-208ENST00000582303 PNPLA6Q8IY17 1366 aa21.76■■□□□ 1.07
CDC42EP4-208ENST00000582303 ROBO2Q9HCK4 1378 aa21.76■■□□□ 1.07
CDC42EP4-208ENST00000582303 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
CDC42EP4-208ENST00000582303 C8orf37Q96NL8 207 aa21.74■■□□□ 1.07
CDC42EP4-208ENST00000582303 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
CDC42EP4-208ENST00000582303 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
CDC42EP4-208ENST00000582303 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP4-208ENST00000582303 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
CDC42EP4-208ENST00000582303 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
CDC42EP4-208ENST00000582303 UPF1Q92900 1129 aaKnown RBP eCLIP21.71■■□□□ 1.07
CDC42EP4-208ENST00000582303 NGLY1Q96IV0 654 aa21.71■■□□□ 1.07
CDC42EP4-208ENST00000582303 SETD1AO15047 1707 aaKnown RBP21.7■■□□□ 1.06
CDC42EP4-208ENST00000582303 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
CDC42EP4-208ENST00000582303 QTRT2Q9H974 415 aaKnown RBP21.7■■□□□ 1.06
CDC42EP4-208ENST00000582303 NPHP3Q7Z494 1330 aa21.69■■□□□ 1.06
CDC42EP4-208ENST00000582303 LRPPRCP42704 1394 aaKnown RBP21.67■■□□□ 1.06
CDC42EP4-208ENST00000582303 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
CDC42EP4-208ENST00000582303 FOXD1Q16676 465 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms