RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
GGA3-211ENST00000582232 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
GGA3-211ENST00000582232 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
GGA3-211ENST00000582232 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
GGA3-211ENST00000582232 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
GGA3-211ENST00000582232 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
GGA3-211ENST00000582232 MYOM2P54296 1465 aa16.6■□□□□ 0.25
GGA3-211ENST00000582232 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
GGA3-211ENST00000582232 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
GGA3-211ENST00000582232 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
GGA3-211ENST00000582232 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
GGA3-211ENST00000582232 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
GGA3-211ENST00000582232 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
GGA3-211ENST00000582232 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
GGA3-211ENST00000582232 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
GGA3-211ENST00000582232 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
GGA3-211ENST00000582232 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
GGA3-211ENST00000582232 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
GGA3-211ENST00000582232 LTKP29376 864 aa16.53■□□□□ 0.24
GGA3-211ENST00000582232 ANKLE2Q86XL3 938 aa16.53■□□□□ 0.24
GGA3-211ENST00000582232 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
GGA3-211ENST00000582232 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
GGA3-211ENST00000582232 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.24
GGA3-211ENST00000582232 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
GGA3-211ENST00000582232 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
GGA3-211ENST00000582232 PLEKHG1Q9ULL1 1385 aa16.51■□□□□ 0.23
GGA3-211ENST00000582232 MED14O60244 1454 aa16.51■□□□□ 0.23
GGA3-211ENST00000582232 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
GGA3-211ENST00000582232 KIAA1210Q9ULL0 1709 aa16.5■□□□□ 0.23
GGA3-211ENST00000582232 LAMC1P11047 1609 aa16.48■□□□□ 0.23
GGA3-211ENST00000582232 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
GGA3-211ENST00000582232 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
GGA3-211ENST00000582232 NUTM2DQ5VT03 806 aaPredicted RBP16.48■□□□□ 0.23
GGA3-211ENST00000582232 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
GGA3-211ENST00000582232 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
GGA3-211ENST00000582232 HSPA2P54652 639 aa16.47■□□□□ 0.23
GGA3-211ENST00000582232 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
GGA3-211ENST00000582232 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
GGA3-211ENST00000582232 IQGAP1P46940 1657 aa16.46■□□□□ 0.23
GGA3-211ENST00000582232 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
GGA3-211ENST00000582232 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
GGA3-211ENST00000582232 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
GGA3-211ENST00000582232 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
GGA3-211ENST00000582232 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
GGA3-211ENST00000582232 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
GGA3-211ENST00000582232 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
GGA3-211ENST00000582232 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
GGA3-211ENST00000582232 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
GGA3-211ENST00000582232 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
GGA3-211ENST00000582232 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
GGA3-211ENST00000582232 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
GGA3-211ENST00000582232 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
GGA3-211ENST00000582232 BCANQ96GW7 911 aa16.38■□□□□ 0.21
GGA3-211ENST00000582232 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
GGA3-211ENST00000582232 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
GGA3-211ENST00000582232 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
GGA3-211ENST00000582232 METP08581 1390 aa16.36■□□□□ 0.21
GGA3-211ENST00000582232 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
GGA3-211ENST00000582232 LRPPRCP42704 1394 aaKnown RBP16.34■□□□□ 0.21
GGA3-211ENST00000582232 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
GGA3-211ENST00000582232 KNDC1Q76NI1 1749 aa16.33■□□□□ 0.21
GGA3-211ENST00000582232 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
GGA3-211ENST00000582232 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
GGA3-211ENST00000582232 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
GGA3-211ENST00000582232 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
GGA3-211ENST00000582232 TECPR2O15040 1411 aa16.32■□□□□ 0.2
GGA3-211ENST00000582232 XRN1Q8IZH2 1706 aaKnown RBP16.32■□□□□ 0.2
GGA3-211ENST00000582232 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
GGA3-211ENST00000582232 NWD1Q149M9 1564 aa16.31■□□□□ 0.2
GGA3-211ENST00000582232 DLC1Q96QB1 1528 aa16.31■□□□□ 0.2
GGA3-211ENST00000582232 SIRT1Q96EB6 747 aa16.31■□□□□ 0.2
GGA3-211ENST00000582232 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
GGA3-211ENST00000582232 CPS1P31327 1500 aa16.29■□□□□ 0.2
GGA3-211ENST00000582232 ARHGEF28Q8N1W1 1705 aaKnown RBP16.29■□□□□ 0.2
GGA3-211ENST00000582232 KCNA6P17658 529 aa16.29■□□□□ 0.2
GGA3-211ENST00000582232 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
GGA3-211ENST00000582232 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
GGA3-211ENST00000582232 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
GGA3-211ENST00000582232 USP47Q96K76 1375 aa16.27■□□□□ 0.2
GGA3-211ENST00000582232 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
GGA3-211ENST00000582232 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.19
GGA3-211ENST00000582232 NKTRP30414 1462 aaKnown RBP16.26■□□□□ 0.19
GGA3-211ENST00000582232 STRCP1A6NGW2 1772 aa16.26■□□□□ 0.19
GGA3-211ENST00000582232 STK26Q9P289 416 aa16.25■□□□□ 0.19
GGA3-211ENST00000582232 TRAK1Q9UPV9 953 aa16.25■□□□□ 0.19
GGA3-211ENST00000582232 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
GGA3-211ENST00000582232 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
GGA3-211ENST00000582232 CENPJQ9HC77 1338 aaPredicted RBP16.21■□□□□ 0.19
GGA3-211ENST00000582232 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
GGA3-211ENST00000582232 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.18
GGA3-211ENST00000582232 ST20-MTHFSA0A0A6YYL1 179 aa16.2■□□□□ 0.18
GGA3-211ENST00000582232 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
GGA3-211ENST00000582232 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
GGA3-211ENST00000582232 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
GGA3-211ENST00000582232 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
GGA3-211ENST00000582232 TESK2Q96S53 571 aa16.19■□□□□ 0.18
GGA3-211ENST00000582232 POGKQ9P215 609 aa16.19■□□□□ 0.18
GGA3-211ENST00000582232 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
GGA3-211ENST00000582232 WAPLQ7Z5K2 1190 aa16.18■□□□□ 0.18
GGA3-211ENST00000582232 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms