RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 KCNA6P17658 529 aa23.34■■□□□ 1.33
CCDC57-215ENST00000582100 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
CCDC57-215ENST00000582100 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.33
CCDC57-215ENST00000582100 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
CCDC57-215ENST00000582100 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC57-215ENST00000582100 BCANQ96GW7 911 aa23.31■■□□□ 1.32
CCDC57-215ENST00000582100 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
CCDC57-215ENST00000582100 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
CCDC57-215ENST00000582100 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
CCDC57-215ENST00000582100 NAIPQ13075 1403 aa23.28■■□□□ 1.32
CCDC57-215ENST00000582100 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
CCDC57-215ENST00000582100 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
CCDC57-215ENST00000582100 PROSER2Q86WR7 435 aaPredicted RBP23.25■■□□□ 1.31
CCDC57-215ENST00000582100 TBX22Q9Y458 520 aa23.25■■□□□ 1.31
CCDC57-215ENST00000582100 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
CCDC57-215ENST00000582100 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
CCDC57-215ENST00000582100 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
CCDC57-215ENST00000582100 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
CCDC57-215ENST00000582100 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
CCDC57-215ENST00000582100 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
CCDC57-215ENST00000582100 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
CCDC57-215ENST00000582100 ADAMTS13Q76LX8 1427 aa23.18■■□□□ 1.3
CCDC57-215ENST00000582100 RBM33Q96EV2 1170 aaKnown RBP23.17■■□□□ 1.3
CCDC57-215ENST00000582100 DIP2AQ14689 1571 aa23.17■■□□□ 1.3
CCDC57-215ENST00000582100 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
CCDC57-215ENST00000582100 PIK3R4Q99570 1358 aa23.15■■□□□ 1.3
CCDC57-215ENST00000582100 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
CCDC57-215ENST00000582100 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.29
CCDC57-215ENST00000582100 MSH6P52701 1360 aa23.14■■□□□ 1.29
CCDC57-215ENST00000582100 TRPM2O94759 1503 aa23.13■■□□□ 1.29
CCDC57-215ENST00000582100 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
CCDC57-215ENST00000582100 NCOA3Q9Y6Q9 1424 aa23.12■■□□□ 1.29
CCDC57-215ENST00000582100 SOCS7O14512 581 aa23.1■■□□□ 1.29
CCDC57-215ENST00000582100 CLTCL1P53675 1640 aa23.1■■□□□ 1.29
CCDC57-215ENST00000582100 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
CCDC57-215ENST00000582100 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
CCDC57-215ENST00000582100 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CCDC57-215ENST00000582100 AMOTL2Q9Y2J4 779 aa23.06■■□□□ 1.28
CCDC57-215ENST00000582100 ROBO1Q9Y6N7 1651 aa23.06■■□□□ 1.28
CCDC57-215ENST00000582100 NRXN3Q9Y4C0 1643 aa23.05■■□□□ 1.28
CCDC57-215ENST00000582100 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
CCDC57-215ENST00000582100 KIF1BO60333 1816 aa23.05■■□□□ 1.28
CCDC57-215ENST00000582100 NEXMIFQ5QGS0 1516 aa23.04■■□□□ 1.28
CCDC57-215ENST00000582100 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
CCDC57-215ENST00000582100 C14orf37Q86TY3 774 aa23.02■■□□□ 1.28
CCDC57-215ENST00000582100 CADPS2Q86UW7 1296 aa23■■□□□ 1.27
CCDC57-215ENST00000582100 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CCDC57-215ENST00000582100 METP08581 1390 aa22.99■■□□□ 1.27
CCDC57-215ENST00000582100 VGFO15240 615 aaPredicted RBP22.98■■□□□ 1.27
CCDC57-215ENST00000582100 XRN1Q8IZH2 1706 aaKnown RBP22.98■■□□□ 1.27
CCDC57-215ENST00000582100 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.98■■□□□ 1.27
CCDC57-215ENST00000582100 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
CCDC57-215ENST00000582100 ATF3P18847 181 aa22.97■■□□□ 1.27
CCDC57-215ENST00000582100 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
CCDC57-215ENST00000582100 FOXD1Q16676 465 aa22.94■■□□□ 1.26
CCDC57-215ENST00000582100 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
CCDC57-215ENST00000582100 DCCP43146 1447 aa22.92■■□□□ 1.26
CCDC57-215ENST00000582100 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
CCDC57-215ENST00000582100 CCDC144AA2RUR9 1427 aa22.89■■□□□ 1.25
CCDC57-215ENST00000582100 SETD5Q9C0A6 1442 aa22.88■■□□□ 1.25
CCDC57-215ENST00000582100 PPLO60437 1756 aa22.88■■□□□ 1.25
CCDC57-215ENST00000582100 JCADQ9P266 1359 aa22.88■■□□□ 1.25
CCDC57-215ENST00000582100 SETD1AO15047 1707 aaKnown RBP22.86■■□□□ 1.25
CCDC57-215ENST00000582100 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
CCDC57-215ENST00000582100 COL16A1Q07092 1604 aaPredicted RBP22.86■■□□□ 1.25
CCDC57-215ENST00000582100 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
CCDC57-215ENST00000582100 BRINP3Q76B58 766 aa22.85■■□□□ 1.25
CCDC57-215ENST00000582100 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
CCDC57-215ENST00000582100 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
CCDC57-215ENST00000582100 PTCH1Q13635 1447 aa22.83■■□□□ 1.25
CCDC57-215ENST00000582100 MST1RQ04912 1400 aa22.82■■□□□ 1.24
CCDC57-215ENST00000582100 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
CCDC57-215ENST00000582100 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
CCDC57-215ENST00000582100 ANKRD30BQ9BXX2 1392 aa22.8■■□□□ 1.24
CCDC57-215ENST00000582100 ROBO2Q9HCK4 1378 aa22.8■■□□□ 1.24
CCDC57-215ENST00000582100 NALCNQ8IZF0 1738 aa22.79■■□□□ 1.24
CCDC57-215ENST00000582100 ADGRF5Q8IZF2 1346 aa22.79■■□□□ 1.24
CCDC57-215ENST00000582100 ASXL1Q8IXJ9 1541 aa22.78■■□□□ 1.24
CCDC57-215ENST00000582100 SPATA31A6Q5VVP1 1343 aa22.78■■□□□ 1.24
CCDC57-215ENST00000582100 RAB3GAP2Q9H2M9 1393 aa22.77■■□□□ 1.24
CCDC57-215ENST00000582100 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
CCDC57-215ENST00000582100 SHPRHQ149N8 1683 aa22.74■■□□□ 1.23
CCDC57-215ENST00000582100 POTEAQ6S8J7 498 aa22.73■■□□□ 1.23
CCDC57-215ENST00000582100 NHSL1Q5SYE7 1610 aa22.72■■□□□ 1.23
CCDC57-215ENST00000582100 C1orf167Q5SNV9 1468 aa22.72■■□□□ 1.23
CCDC57-215ENST00000582100 LRRC59Q96AG4 307 aaKnown RBP22.7■■□□□ 1.22
CCDC57-215ENST00000582100 PIK3C2GO75747 1445 aa22.7■■□□□ 1.22
CCDC57-215ENST00000582100 LRP6O75581 1613 aa22.7■■□□□ 1.22
CCDC57-215ENST00000582100 TECPR2O15040 1411 aa22.69■■□□□ 1.22
CCDC57-215ENST00000582100 HRCP23327 699 aa22.69■■□□□ 1.22
CCDC57-215ENST00000582100 LRPPRCP42704 1394 aaKnown RBP22.68■■□□□ 1.22
CCDC57-215ENST00000582100 ABCC11Q96J66 1382 aa22.67■■□□□ 1.22
CCDC57-215ENST00000582100 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
CCDC57-215ENST00000582100 DDX17Q92841 729 aaKnown RBP22.66■■□□□ 1.22
CCDC57-215ENST00000582100 STK26Q9P289 416 aa22.66■■□□□ 1.22
CCDC57-215ENST00000582100 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
CCDC57-215ENST00000582100 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
CCDC57-215ENST00000582100 C14orf93Q9H972 538 aaKnown RBP22.64■■□□□ 1.21
CCDC57-215ENST00000582100 NRXN1Q9ULB1 1477 aa22.64■■□□□ 1.21
CCDC57-215ENST00000582100 LAMC1P11047 1609 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms