RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
SRSF1-204ENST00000581979 TOM1O60784 492 aa18.32■□□□□ 0.52
SRSF1-204ENST00000581979 E9PCH4 1651 aa18.31■□□□□ 0.52
SRSF1-204ENST00000581979 NUP155O75694 1391 aa18.3■□□□□ 0.52
SRSF1-204ENST00000581979 ALKQ9UM73 1620 aa18.29■□□□□ 0.52
SRSF1-204ENST00000581979 TMEM131LA2VDJ0 1609 aa18.28■□□□□ 0.52
SRSF1-204ENST00000581979 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
SRSF1-204ENST00000581979 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
SRSF1-204ENST00000581979 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
SRSF1-204ENST00000581979 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
SRSF1-204ENST00000581979 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
SRSF1-204ENST00000581979 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
SRSF1-204ENST00000581979 DISP3Q9P2K9 1392 aa18.23■□□□□ 0.51
SRSF1-204ENST00000581979 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
SRSF1-204ENST00000581979 KCNA6P17658 529 aa18.23■□□□□ 0.51
SRSF1-204ENST00000581979 SLC26A8Q96RN1 970 aa18.23■□□□□ 0.51
SRSF1-204ENST00000581979 PLEKHG1Q9ULL1 1385 aa18.22■□□□□ 0.51
SRSF1-204ENST00000581979 SIN3AQ96ST3 1273 aa18.22■□□□□ 0.51
SRSF1-204ENST00000581979 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
SRSF1-204ENST00000581979 XIRP1Q702N8 1843 aaKnown RBP18.22■□□□□ 0.51
SRSF1-204ENST00000581979 HSPA1LP34931 641 aa18.21■□□□□ 0.51
SRSF1-204ENST00000581979 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
SRSF1-204ENST00000581979 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.2■□□□□ 0.5
SRSF1-204ENST00000581979 NWD1Q149M9 1564 aa18.2■□□□□ 0.5
SRSF1-204ENST00000581979 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
SRSF1-204ENST00000581979 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
SRSF1-204ENST00000581979 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-204ENST00000581979 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
SRSF1-204ENST00000581979 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
SRSF1-204ENST00000581979 BCANQ96GW7 911 aa18.17■□□□□ 0.5
SRSF1-204ENST00000581979 FOXD1Q16676 465 aa18.15■□□□□ 0.5
SRSF1-204ENST00000581979 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
SRSF1-204ENST00000581979 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
SRSF1-204ENST00000581979 PROSER2Q86WR7 435 aaPredicted RBP18.14■□□□□ 0.49
SRSF1-204ENST00000581979 ADAMTS13Q76LX8 1427 aa18.13■□□□□ 0.49
SRSF1-204ENST00000581979 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
SRSF1-204ENST00000581979 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
SRSF1-204ENST00000581979 ILDR2Q71H61 639 aa18.12■□□□□ 0.49
SRSF1-204ENST00000581979 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
SRSF1-204ENST00000581979 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
SRSF1-204ENST00000581979 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
SRSF1-204ENST00000581979 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
SRSF1-204ENST00000581979 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
SRSF1-204ENST00000581979 TRPM2O94759 1503 aa18.11■□□□□ 0.49
SRSF1-204ENST00000581979 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
SRSF1-204ENST00000581979 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
SRSF1-204ENST00000581979 CLTCL1P53675 1640 aa18.08■□□□□ 0.49
SRSF1-204ENST00000581979 NCOA3Q9Y6Q9 1424 aa18.07■□□□□ 0.48
SRSF1-204ENST00000581979 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
SRSF1-204ENST00000581979 MSH6P52701 1360 aa18.06■□□□□ 0.48
SRSF1-204ENST00000581979 SETBP1Q9Y6X0 1596 aa18.06■□□□□ 0.48
SRSF1-204ENST00000581979 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
SRSF1-204ENST00000581979 ZNF326Q5BKZ1 582 aaKnown RBP18.04■□□□□ 0.48
SRSF1-204ENST00000581979 NEXMIFQ5QGS0 1516 aa18.03■□□□□ 0.48
SRSF1-204ENST00000581979 KIF1BO60333 1816 aa18.03■□□□□ 0.48
SRSF1-204ENST00000581979 PTPRUQ92729 1446 aa18.02■□□□□ 0.48
SRSF1-204ENST00000581979 ROBO1Q9Y6N7 1651 aa18.02■□□□□ 0.47
SRSF1-204ENST00000581979 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
SRSF1-204ENST00000581979 AMOTL2Q9Y2J4 779 aa18.01■□□□□ 0.47
SRSF1-204ENST00000581979 SOCS7O14512 581 aa17.99■□□□□ 0.47
SRSF1-204ENST00000581979 XRN1Q8IZH2 1706 aaKnown RBP17.98■□□□□ 0.47
SRSF1-204ENST00000581979 C19orf44Q9H6X5 657 aa17.98■□□□□ 0.47
SRSF1-204ENST00000581979 METP08581 1390 aa17.97■□□□□ 0.47
SRSF1-204ENST00000581979 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
SRSF1-204ENST00000581979 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.47
SRSF1-204ENST00000581979 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.96■□□□□ 0.47
SRSF1-204ENST00000581979 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
SRSF1-204ENST00000581979 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
SRSF1-204ENST00000581979 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
SRSF1-204ENST00000581979 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
SRSF1-204ENST00000581979 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
SRSF1-204ENST00000581979 DCCP43146 1447 aa17.93■□□□□ 0.46
SRSF1-204ENST00000581979 ATF3P18847 181 aa17.92■□□□□ 0.46
SRSF1-204ENST00000581979 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
SRSF1-204ENST00000581979 PPLO60437 1756 aa17.91■□□□□ 0.46
SRSF1-204ENST00000581979 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
SRSF1-204ENST00000581979 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
SRSF1-204ENST00000581979 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
SRSF1-204ENST00000581979 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
SRSF1-204ENST00000581979 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
SRSF1-204ENST00000581979 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
SRSF1-204ENST00000581979 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
SRSF1-204ENST00000581979 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
SRSF1-204ENST00000581979 JCADQ9P266 1359 aa17.85■□□□□ 0.45
SRSF1-204ENST00000581979 MST1RQ04912 1400 aa17.84■□□□□ 0.45
SRSF1-204ENST00000581979 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
SRSF1-204ENST00000581979 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
SRSF1-204ENST00000581979 NALCNQ8IZF0 1738 aa17.83■□□□□ 0.45
SRSF1-204ENST00000581979 ROBO2Q9HCK4 1378 aa17.83■□□□□ 0.44
SRSF1-204ENST00000581979 IFT172Q9UG01 1749 aa17.83■□□□□ 0.44
SRSF1-204ENST00000581979 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
SRSF1-204ENST00000581979 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
SRSF1-204ENST00000581979 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
SRSF1-204ENST00000581979 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
SRSF1-204ENST00000581979 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
SRSF1-204ENST00000581979 SPATA31A6Q5VVP1 1343 aa17.78■□□□□ 0.44
SRSF1-204ENST00000581979 PIK3C2GO75747 1445 aa17.78■□□□□ 0.44
SRSF1-204ENST00000581979 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
SRSF1-204ENST00000581979 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
SRSF1-204ENST00000581979 NHSL1Q5SYE7 1610 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms