RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
RTTN-208ENST00000581709 SLIT1O75093 1534 aa12.93□□□□□ -0.34
RTTN-208ENST00000581709 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
RTTN-208ENST00000581709 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
RTTN-208ENST00000581709 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
RTTN-208ENST00000581709 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
RTTN-208ENST00000581709 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
RTTN-208ENST00000581709 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
RTTN-208ENST00000581709 SLC26A8Q96RN1 970 aa12.92□□□□□ -0.34
RTTN-208ENST00000581709 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 TBX22Q9Y458 520 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 MED14O60244 1454 aa12.91□□□□□ -0.34
RTTN-208ENST00000581709 KDM5AP29375 1690 aaKnown RBP12.9□□□□□ -0.34
RTTN-208ENST00000581709 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
RTTN-208ENST00000581709 PLEKHG1Q9ULL1 1385 aa12.9□□□□□ -0.34
RTTN-208ENST00000581709 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
RTTN-208ENST00000581709 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
RTTN-208ENST00000581709 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
RTTN-208ENST00000581709 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
RTTN-208ENST00000581709 KCNA6P17658 529 aa12.85□□□□□ -0.35
RTTN-208ENST00000581709 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
RTTN-208ENST00000581709 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
RTTN-208ENST00000581709 KIF1BO60333 1816 aa12.83□□□□□ -0.35
RTTN-208ENST00000581709 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
RTTN-208ENST00000581709 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.36
RTTN-208ENST00000581709 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
RTTN-208ENST00000581709 NEXMIFQ5QGS0 1516 aa12.82□□□□□ -0.36
RTTN-208ENST00000581709 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
RTTN-208ENST00000581709 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
RTTN-208ENST00000581709 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
RTTN-208ENST00000581709 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
RTTN-208ENST00000581709 PROSER2Q86WR7 435 aaPredicted RBP12.8□□□□□ -0.36
RTTN-208ENST00000581709 CERKQ8TCT0 537 aa12.8□□□□□ -0.36
RTTN-208ENST00000581709 IQGAP1P46940 1657 aa12.79□□□□□ -0.36
RTTN-208ENST00000581709 METP08581 1390 aa12.79□□□□□ -0.36
RTTN-208ENST00000581709 TMEM132EQ6IEE7 984 aa12.78□□□□□ -0.36
RTTN-208ENST00000581709 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
RTTN-208ENST00000581709 MYO5BQ9ULV0 1848 aa12.77□□□□□ -0.37
RTTN-208ENST00000581709 STK26Q9P289 416 aa12.77□□□□□ -0.37
RTTN-208ENST00000581709 PIK3C2GO75747 1445 aa12.77□□□□□ -0.37
RTTN-208ENST00000581709 MYOM2P54296 1465 aa12.77□□□□□ -0.37
RTTN-208ENST00000581709 SETBP1Q9Y6X0 1596 aa12.76□□□□□ -0.37
RTTN-208ENST00000581709 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
RTTN-208ENST00000581709 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
RTTN-208ENST00000581709 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
RTTN-208ENST00000581709 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
RTTN-208ENST00000581709 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
RTTN-208ENST00000581709 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
RTTN-208ENST00000581709 CPS1P31327 1500 aa12.72□□□□□ -0.37
RTTN-208ENST00000581709 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
RTTN-208ENST00000581709 PPLO60437 1756 aa12.72□□□□□ -0.37
RTTN-208ENST00000581709 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
RTTN-208ENST00000581709 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 PTPRUQ92729 1446 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
RTTN-208ENST00000581709 TMEM94Q12767 1356 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 NBPF8Q3BBV2 869 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 POGKQ9P215 609 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 TRAK1Q9UPV9 953 aa12.71□□□□□ -0.37
RTTN-208ENST00000581709 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
RTTN-208ENST00000581709 TOM1O60784 492 aa12.7□□□□□ -0.38
RTTN-208ENST00000581709 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
RTTN-208ENST00000581709 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
RTTN-208ENST00000581709 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
RTTN-208ENST00000581709 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
RTTN-208ENST00000581709 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 ATF3P18847 181 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
RTTN-208ENST00000581709 MSH6P52701 1360 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
RTTN-208ENST00000581709 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
RTTN-208ENST00000581709 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
RTTN-208ENST00000581709 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
RTTN-208ENST00000581709 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
RTTN-208ENST00000581709 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
RTTN-208ENST00000581709 TECPR2O15040 1411 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 PTCH1Q13635 1447 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 FAM135BQ49AJ0 1406 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
RTTN-208ENST00000581709 PIP4K2BP78356 416 aa12.63□□□□□ -0.39
RTTN-208ENST00000581709 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
RTTN-208ENST00000581709 CHD2O14647 1828 aaKnown RBP12.62□□□□□ -0.39
RTTN-208ENST00000581709 LAMC1P11047 1609 aa12.62□□□□□ -0.39
RTTN-208ENST00000581709 ADGRB1O14514 1584 aa12.61□□□□□ -0.39
RTTN-208ENST00000581709 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
RTTN-208ENST00000581709 CENPJQ9HC77 1338 aaPredicted RBP12.61□□□□□ -0.39
RTTN-208ENST00000581709 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
RTTN-208ENST00000581709 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
RTTN-208ENST00000581709 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
RTTN-208ENST00000581709 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms