RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 ROCK1Q13464 1354 aa33.31■■■□□ 2.92
RBFOX3-204ENST00000580508 FAM135BQ49AJ0 1406 aa33.28■■■□□ 2.92
RBFOX3-204ENST00000580508 SENP3Q9H4L4 574 aaPredicted RBP33.28■■■□□ 2.92
RBFOX3-204ENST00000580508 NKTRP30414 1462 aaKnown RBP33.28■■■□□ 2.92
RBFOX3-204ENST00000580508 E9PCH4 1651 aa33.28■■■□□ 2.92
RBFOX3-204ENST00000580508 IQGAP3Q86VI3 1631 aa33.25■■■□□ 2.91
RBFOX3-204ENST00000580508 PLEKHG1Q9ULL1 1385 aa33.24■■■□□ 2.91
RBFOX3-204ENST00000580508 RIMS2Q9UQ26 1411 aa33.23■■■□□ 2.91
RBFOX3-204ENST00000580508 PROSER2Q86WR7 435 aaPredicted RBP33.23■■■□□ 2.91
RBFOX3-204ENST00000580508 CHD2O14647 1828 aaKnown RBP33.23■■■□□ 2.91
RBFOX3-204ENST00000580508 PHF23Q9BUL5 403 aaPredicted RBP33.21■■■□□ 2.91
RBFOX3-204ENST00000580508 ROBO1Q9Y6N7 1651 aa33.18■■■□□ 2.9
RBFOX3-204ENST00000580508 RBM33Q96EV2 1170 aaKnown RBP33.18■■■□□ 2.9
RBFOX3-204ENST00000580508 HDGFP51858 240 aaKnown RBP33.16■■■□□ 2.9
RBFOX3-204ENST00000580508 BCANQ96GW7 911 aa33.15■■■□□ 2.9
RBFOX3-204ENST00000580508 TBX22Q9Y458 520 aa33.12■■■□□ 2.89
RBFOX3-204ENST00000580508 PPP1R15AO75807 674 aaPredicted RBP33.11■■■□□ 2.89
RBFOX3-204ENST00000580508 MSH6P52701 1360 aa33.1■■■□□ 2.89
RBFOX3-204ENST00000580508 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.1■■■□□ 2.89
RBFOX3-204ENST00000580508 ADAMTS13Q76LX8 1427 aa33.1■■■□□ 2.89
RBFOX3-204ENST00000580508 NUP155O75694 1391 aa33.09■■■□□ 2.89
RBFOX3-204ENST00000580508 RGS17Q9UGC6 210 aaPredicted RBP33.08■■■□□ 2.89
RBFOX3-204ENST00000580508 DIP2AQ14689 1571 aa33.07■■■□□ 2.88
RBFOX3-204ENST00000580508 CHGAP10645 457 aaKnown RBP33.06■■■□□ 2.88
RBFOX3-204ENST00000580508 NCOA3Q9Y6Q9 1424 aa33.04■■■□□ 2.88
RBFOX3-204ENST00000580508 PIK3R4Q99570 1358 aa33.02■■■□□ 2.88
RBFOX3-204ENST00000580508 ITGAEP38570 1179 aa33.02■■■□□ 2.88
RBFOX3-204ENST00000580508 SLAIN2Q9P270 581 aa33.02■■■□□ 2.88
RBFOX3-204ENST00000580508 NUTM2DQ5VT03 806 aaPredicted RBP33■■■□□ 2.87
RBFOX3-204ENST00000580508 SPHKAPQ2M3C7 1700 aa32.99■■■□□ 2.87
RBFOX3-204ENST00000580508 PHLPP1O60346 1717 aa32.98■■■□□ 2.87
RBFOX3-204ENST00000580508 PPARGC1BQ86YN6 1023 aaKnown RBP32.98■■■□□ 2.87
RBFOX3-204ENST00000580508 TRPM2O94759 1503 aa32.95■■■□□ 2.87
RBFOX3-204ENST00000580508 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.94■■■□□ 2.86
RBFOX3-204ENST00000580508 NRXN3Q9Y4C0 1643 aa32.92■■■□□ 2.86
RBFOX3-204ENST00000580508 PTPRUQ92729 1446 aa32.91■■■□□ 2.86
RBFOX3-204ENST00000580508 COL16A1Q07092 1604 aaPredicted RBP32.91■■■□□ 2.86
RBFOX3-204ENST00000580508 SETBP1Q9Y6X0 1596 aa32.89■■■□□ 2.86
RBFOX3-204ENST00000580508 RRBP1Q9P2E9 1410 aaKnown RBP32.89■■■□□ 2.86
RBFOX3-204ENST00000580508 C19orf44Q9H6X5 657 aa32.87■■■□□ 2.85
RBFOX3-204ENST00000580508 JCADQ9P266 1359 aa32.86■■■□□ 2.85
RBFOX3-204ENST00000580508 XRN1Q8IZH2 1706 aaKnown RBP32.86■■■□□ 2.85
RBFOX3-204ENST00000580508 CADPS2Q86UW7 1296 aa32.85■■■□□ 2.85
RBFOX3-204ENST00000580508 AMOTL2Q9Y2J4 779 aa32.85■■■□□ 2.85
RBFOX3-204ENST00000580508 POTEAQ6S8J7 498 aa32.84■■■□□ 2.85
RBFOX3-204ENST00000580508 C14orf37Q86TY3 774 aa32.84■■■□□ 2.85
RBFOX3-204ENST00000580508 CLTCL1P53675 1640 aa32.83■■■□□ 2.85
RBFOX3-204ENST00000580508 AHDC1Q5TGY3 1603 aaPredicted RBP32.83■■■□□ 2.85
RBFOX3-204ENST00000580508 NAIPQ13075 1403 aa32.82■■■□□ 2.84
RBFOX3-204ENST00000580508 ATF3P18847 181 aa32.79■■■□□ 2.84
RBFOX3-204ENST00000580508 NEXMIFQ5QGS0 1516 aa32.78■■■□□ 2.84
RBFOX3-204ENST00000580508 DCCP43146 1447 aa32.77■■■□□ 2.84
RBFOX3-204ENST00000580508 KIF1BO60333 1816 aa32.75■■■□□ 2.83
RBFOX3-204ENST00000580508 ZNF326Q5BKZ1 582 aaKnown RBP32.75■■■□□ 2.83
RBFOX3-204ENST00000580508 METP08581 1390 aa32.74■■■□□ 2.83
RBFOX3-204ENST00000580508 SHPRHQ149N8 1683 aa32.73■■■□□ 2.83
RBFOX3-204ENST00000580508 LRP6O75581 1613 aa32.71■■■□□ 2.83
RBFOX3-204ENST00000580508 SPATA31A6Q5VVP1 1343 aa32.71■■■□□ 2.83
RBFOX3-204ENST00000580508 BRINP3Q76B58 766 aa32.7■■■□□ 2.83
RBFOX3-204ENST00000580508 HFM1A2PYH4 1435 aa32.67■■■□□ 2.82
RBFOX3-204ENST00000580508 MST1RQ04912 1400 aa32.67■■■□□ 2.82
RBFOX3-204ENST00000580508 ASXL1Q8IXJ9 1541 aa32.65■■■□□ 2.82
RBFOX3-204ENST00000580508 SETD1AO15047 1707 aaKnown RBP32.63■■■□□ 2.81
RBFOX3-204ENST00000580508 NHSL1Q5SYE7 1610 aa32.63■■■□□ 2.81
RBFOX3-204ENST00000580508 NALCNQ8IZF0 1738 aa32.63■■■□□ 2.81
RBFOX3-204ENST00000580508 ADGRL3Q9HAR2 1447 aa32.62■■■□□ 2.81
RBFOX3-204ENST00000580508 SETD5Q9C0A6 1442 aa32.58■■■□□ 2.81
RBFOX3-204ENST00000580508 TRIM52Q96A61 297 aa32.55■■■□□ 2.8
RBFOX3-204ENST00000580508 VGFO15240 615 aaPredicted RBP32.54■■■□□ 2.8
RBFOX3-204ENST00000580508 PPLO60437 1756 aa32.54■■■□□ 2.8
RBFOX3-204ENST00000580508 PTCH1Q13635 1447 aa32.53■■■□□ 2.8
RBFOX3-204ENST00000580508 PRAG1Q86YV5 1406 aa32.53■■■□□ 2.8
RBFOX3-204ENST00000580508 RPGRIP1LQ68CZ1 1315 aa32.52■■■□□ 2.8
RBFOX3-204ENST00000580508 MEX3CQ5U5Q3 659 aaKnown RBP32.52■■■□□ 2.8
RBFOX3-204ENST00000580508 ZNF772Q68DY9 489 aaPredicted RBP32.51■■■□□ 2.79
RBFOX3-204ENST00000580508 SLC4A1APQ9BWU0 796 aaKnown RBP32.51■■■□□ 2.79
RBFOX3-204ENST00000580508 LAMC1P11047 1609 aa32.48■■■□□ 2.79
RBFOX3-204ENST00000580508 ROBO2Q9HCK4 1378 aa32.47■■■□□ 2.79
RBFOX3-204ENST00000580508 LRRC59Q96AG4 307 aaKnown RBP32.46■■■□□ 2.79
RBFOX3-204ENST00000580508 C1orf167Q5SNV9 1468 aa32.46■■■□□ 2.79
RBFOX3-204ENST00000580508 NUTM2BA6NNL0 878 aaPredicted RBP32.43■■■□□ 2.78
RBFOX3-204ENST00000580508 NUTM2EB1AL46 878 aaPredicted RBP32.43■■■□□ 2.78
RBFOX3-204ENST00000580508 NUTM2AQ8IVF1 878 aaPredicted RBP32.43■■■□□ 2.78
RBFOX3-204ENST00000580508 DDX17Q92841 729 aaKnown RBP32.43■■■□□ 2.78
RBFOX3-204ENST00000580508 PNPLA6Q8IY17 1366 aa32.41■■■□□ 2.78
RBFOX3-204ENST00000580508 FOXD1Q16676 465 aa32.37■■■□□ 2.77
RBFOX3-204ENST00000580508 CDK12Q9NYV4 1490 aaPredicted RBP32.35■■■□□ 2.77
RBFOX3-204ENST00000580508 IFT172Q9UG01 1749 aa32.35■■■□□ 2.77
RBFOX3-204ENST00000580508 AFF2P51816 1311 aa32.35■■■□□ 2.77
RBFOX3-204ENST00000580508 SPATA31E1Q6ZUB1 1445 aa32.34■■■□□ 2.77
RBFOX3-204ENST00000580508 RXRBP28702 533 aa32.33■■■□□ 2.77
RBFOX3-204ENST00000580508 SOS2Q07890 1332 aaPredicted RBP32.32■■■□□ 2.76
RBFOX3-204ENST00000580508 ORAI2Q96SN7 254 aa32.32■■■□□ 2.76
RBFOX3-204ENST00000580508 CCDC144AA2RUR9 1427 aa32.32■■■□□ 2.76
RBFOX3-204ENST00000580508 ADGRF5Q8IZF2 1346 aa32.3■■■□□ 2.76
RBFOX3-204ENST00000580508 CDC42BPGQ6DT37 1551 aa32.3■■■□□ 2.76
RBFOX3-204ENST00000580508 UPF1Q92900 1129 aaKnown RBP eCLIP32.28■■■□□ 2.76
RBFOX3-204ENST00000580508 MPHOSPH9Q99550 1183 aa32.28■■■□□ 2.76
RBFOX3-204ENST00000580508 TECPR2O15040 1411 aa32.26■■■□□ 2.76
RBFOX3-204ENST00000580508 ANKRD30BQ9BXX2 1392 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms