RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
PMP22-207ENST00000580497 ZNF326Q5BKZ1 582 aaKnown RBP12□□□□□ -0.49
PMP22-207ENST00000580497 ZFYVE9O95405 1425 aa12□□□□□ -0.49
PMP22-207ENST00000580497 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
PMP22-207ENST00000580497 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 RIMS2Q9UQ26 1411 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 SLIT1O75093 1534 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 IQGAP1P46940 1657 aa11.99□□□□□ -0.49
PMP22-207ENST00000580497 SETD1AO15047 1707 aaKnown RBP11.98□□□□□ -0.49
PMP22-207ENST00000580497 POLR1AO95602 1720 aaPredicted RBP11.98□□□□□ -0.49
PMP22-207ENST00000580497 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
PMP22-207ENST00000580497 NRXN3Q9Y4C0 1643 aa11.98□□□□□ -0.49
PMP22-207ENST00000580497 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
PMP22-207ENST00000580497 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
PMP22-207ENST00000580497 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
PMP22-207ENST00000580497 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
PMP22-207ENST00000580497 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
PMP22-207ENST00000580497 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
PMP22-207ENST00000580497 LAMC1P11047 1609 aa11.94□□□□□ -0.5
PMP22-207ENST00000580497 LTKP29376 864 aa11.94□□□□□ -0.5
PMP22-207ENST00000580497 RALGAPBQ86X10 1494 aa11.94□□□□□ -0.5
PMP22-207ENST00000580497 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
PMP22-207ENST00000580497 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
PMP22-207ENST00000580497 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
PMP22-207ENST00000580497 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
PMP22-207ENST00000580497 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
PMP22-207ENST00000580497 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
PMP22-207ENST00000580497 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
PMP22-207ENST00000580497 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
PMP22-207ENST00000580497 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
PMP22-207ENST00000580497 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
PMP22-207ENST00000580497 SCAF11Q99590 1463 aaKnown RBP11.9□□□□□ -0.5
PMP22-207ENST00000580497 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
PMP22-207ENST00000580497 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
PMP22-207ENST00000580497 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
PMP22-207ENST00000580497 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
PMP22-207ENST00000580497 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
PMP22-207ENST00000580497 HSPA2P54652 639 aa11.88□□□□□ -0.51
PMP22-207ENST00000580497 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
PMP22-207ENST00000580497 PLEKHG1Q9ULL1 1385 aa11.88□□□□□ -0.51
PMP22-207ENST00000580497 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
PMP22-207ENST00000580497 MED14O60244 1454 aa11.88□□□□□ -0.51
PMP22-207ENST00000580497 EID1Q9Y6B2 187 aa11.87□□□□□ -0.51
PMP22-207ENST00000580497 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
PMP22-207ENST00000580497 GPRASP1Q5JY77 1395 aa11.87□□□□□ -0.51
PMP22-207ENST00000580497 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
PMP22-207ENST00000580497 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
PMP22-207ENST00000580497 DIP2AQ14689 1571 aa11.86□□□□□ -0.51
PMP22-207ENST00000580497 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
PMP22-207ENST00000580497 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
PMP22-207ENST00000580497 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
PMP22-207ENST00000580497 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
PMP22-207ENST00000580497 METP08581 1390 aa11.84□□□□□ -0.51
PMP22-207ENST00000580497 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
PMP22-207ENST00000580497 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
PMP22-207ENST00000580497 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
PMP22-207ENST00000580497 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
PMP22-207ENST00000580497 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
PMP22-207ENST00000580497 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
PMP22-207ENST00000580497 BCANQ96GW7 911 aa11.82□□□□□ -0.52
PMP22-207ENST00000580497 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
PMP22-207ENST00000580497 USP47Q96K76 1375 aa11.81□□□□□ -0.52
PMP22-207ENST00000580497 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
PMP22-207ENST00000580497 YTHDC2Q9H6S0 1430 aaKnown RBP11.81□□□□□ -0.52
PMP22-207ENST00000580497 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
PMP22-207ENST00000580497 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
PMP22-207ENST00000580497 CPS1P31327 1500 aa11.79□□□□□ -0.52
PMP22-207ENST00000580497 DLC1Q96QB1 1528 aa11.78□□□□□ -0.52
PMP22-207ENST00000580497 EIF4G2P78344 907 aaKnown RBP eCLIP11.78□□□□□ -0.52
PMP22-207ENST00000580497 STK26Q9P289 416 aa11.78□□□□□ -0.52
PMP22-207ENST00000580497 TRAK1Q9UPV9 953 aa11.78□□□□□ -0.52
PMP22-207ENST00000580497 NWD1Q149M9 1564 aa11.78□□□□□ -0.52
PMP22-207ENST00000580497 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
PMP22-207ENST00000580497 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
PMP22-207ENST00000580497 TECPR2O15040 1411 aa11.77□□□□□ -0.53
PMP22-207ENST00000580497 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
PMP22-207ENST00000580497 XIRP1Q702N8 1843 aaKnown RBP11.75□□□□□ -0.53
PMP22-207ENST00000580497 ABCC11Q96J66 1382 aa11.75□□□□□ -0.53
PMP22-207ENST00000580497 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
PMP22-207ENST00000580497 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
PMP22-207ENST00000580497 C11orf95C9JLR9 678 aaPredicted RBP11.74□□□□□ -0.53
PMP22-207ENST00000580497 NALCNQ8IZF0 1738 aa11.74□□□□□ -0.53
PMP22-207ENST00000580497 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
PMP22-207ENST00000580497 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
PMP22-207ENST00000580497 TESK2Q96S53 571 aa11.73□□□□□ -0.53
PMP22-207ENST00000580497 ROBO2Q9HCK4 1378 aa11.73□□□□□ -0.53
PMP22-207ENST00000580497 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
PMP22-207ENST00000580497 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
PMP22-207ENST00000580497 PTCH1Q13635 1447 aa11.72□□□□□ -0.53
PMP22-207ENST00000580497 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
PMP22-207ENST00000580497 WAPLQ7Z5K2 1190 aa11.72□□□□□ -0.53
PMP22-207ENST00000580497 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
PMP22-207ENST00000580497 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
PMP22-207ENST00000580497 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.53
PMP22-207ENST00000580497 KCNA6P17658 529 aa11.71□□□□□ -0.53
PMP22-207ENST00000580497 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
PMP22-207ENST00000580497 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
PMP22-207ENST00000580497 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms