RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 SPATA31E1Q6ZUB1 1445 aa31.77■■■□□ 2.68
TSEN54-207ENST00000580013 DHX57Q6P158 1386 aaKnown RBP31.77■■■□□ 2.68
TSEN54-207ENST00000580013 NPHP4O75161 1426 aaPredicted RBP31.76■■■□□ 2.68
TSEN54-207ENST00000580013 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.76■■■□□ 2.67
TSEN54-207ENST00000580013 RPGRIP1LQ68CZ1 1315 aa31.74■■■□□ 2.67
TSEN54-207ENST00000580013 ZNF326Q5BKZ1 582 aaKnown RBP31.72■■■□□ 2.67
TSEN54-207ENST00000580013 POLR1AO95602 1720 aaPredicted RBP31.72■■■□□ 2.67
TSEN54-207ENST00000580013 KIF1BO60333 1816 aa31.71■■■□□ 2.67
TSEN54-207ENST00000580013 NUTM2DQ5VT03 806 aaPredicted RBP31.71■■■□□ 2.67
TSEN54-207ENST00000580013 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
TSEN54-207ENST00000580013 RGL3Q3MIN7 710 aa31.67■■■□□ 2.66
TSEN54-207ENST00000580013 NEXMIFQ5QGS0 1516 aa31.65■■■□□ 2.66
TSEN54-207ENST00000580013 VGFO15240 615 aaPredicted RBP31.62■■■□□ 2.65
TSEN54-207ENST00000580013 PPP1R15AO75807 674 aaPredicted RBP31.62■■■□□ 2.65
TSEN54-207ENST00000580013 IQGAP1P46940 1657 aa31.62■■■□□ 2.65
TSEN54-207ENST00000580013 TBX22Q9Y458 520 aa31.6■■■□□ 2.65
TSEN54-207ENST00000580013 SLC26A8Q96RN1 970 aa31.59■■■□□ 2.65
TSEN54-207ENST00000580013 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
TSEN54-207ENST00000580013 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
TSEN54-207ENST00000580013 SIN3AQ96ST3 1273 aa31.57■■■□□ 2.64
TSEN54-207ENST00000580013 ADGRF5Q8IZF2 1346 aa31.54■■■□□ 2.64
TSEN54-207ENST00000580013 SENP3Q9H4L4 574 aaPredicted RBP31.54■■■□□ 2.64
TSEN54-207ENST00000580013 BCANQ96GW7 911 aa31.53■■■□□ 2.64
TSEN54-207ENST00000580013 LTBP4Q8N2S1 1624 aa31.53■■■□□ 2.64
TSEN54-207ENST00000580013 PPLO60437 1756 aa31.51■■■□□ 2.64
TSEN54-207ENST00000580013 SETBP1Q9Y6X0 1596 aa31.5■■■□□ 2.63
TSEN54-207ENST00000580013 STAC3Q96MF2 364 aa31.48■■■□□ 2.63
TSEN54-207ENST00000580013 NRXN3Q9Y4C0 1643 aa31.47■■■□□ 2.63
TSEN54-207ENST00000580013 KCNA6P17658 529 aa31.47■■■□□ 2.63
TSEN54-207ENST00000580013 IFT172Q9UG01 1749 aa31.46■■■□□ 2.63
TSEN54-207ENST00000580013 DCAF11Q8TEB1 546 aa31.44■■■□□ 2.62
TSEN54-207ENST00000580013 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
TSEN54-207ENST00000580013 NEUROD1Q13562 356 aa31.43■■■□□ 2.62
TSEN54-207ENST00000580013 PIK3R4Q99570 1358 aa31.42■■■□□ 2.62
TSEN54-207ENST00000580013 MYOM2P54296 1465 aa31.41■■■□□ 2.62
TSEN54-207ENST00000580013 CERKQ8TCT0 537 aa31.41■■■□□ 2.62
TSEN54-207ENST00000580013 DIP2AQ14689 1571 aa31.41■■■□□ 2.62
TSEN54-207ENST00000580013 METP08581 1390 aa31.41■■■□□ 2.62
TSEN54-207ENST00000580013 L3MBTL2Q969R5 705 aa31.39■■■□□ 2.62
TSEN54-207ENST00000580013 C14orf93Q9H972 538 aaKnown RBP31.39■■■□□ 2.62
TSEN54-207ENST00000580013 KDM2AQ9Y2K7 1162 aa31.39■■■□□ 2.62
TSEN54-207ENST00000580013 PIK3C2GO75747 1445 aa31.39■■■□□ 2.62
TSEN54-207ENST00000580013 STRCP1A6NGW2 1772 aa31.38■■■□□ 2.61
TSEN54-207ENST00000580013 PTPRUQ92729 1446 aa31.38■■■□□ 2.61
TSEN54-207ENST00000580013 ALKQ9UM73 1620 aa31.37■■■□□ 2.61
TSEN54-207ENST00000580013 CPS1P31327 1500 aa31.35■■■□□ 2.61
TSEN54-207ENST00000580013 CLSPNQ9HAW4 1339 aa31.35■■■□□ 2.61
TSEN54-207ENST00000580013 AMOTL2Q9Y2J4 779 aa31.34■■■□□ 2.61
TSEN54-207ENST00000580013 CHD2O14647 1828 aaKnown RBP31.33■■■□□ 2.61
TSEN54-207ENST00000580013 CFAP70Q5T0N1 1121 aa31.32■■■□□ 2.6
TSEN54-207ENST00000580013 NWD1Q149M9 1564 aa31.31■■■□□ 2.6
TSEN54-207ENST00000580013 LRRC7Q96NW7 1537 aa31.3■■■□□ 2.6
TSEN54-207ENST00000580013 SETD1AO15047 1707 aaKnown RBP31.3■■■□□ 2.6
TSEN54-207ENST00000580013 PROSER2Q86WR7 435 aaPredicted RBP31.26■■■□□ 2.59
TSEN54-207ENST00000580013 TMEM132EQ6IEE7 984 aa31.25■■■□□ 2.59
TSEN54-207ENST00000580013 NKTRP30414 1462 aaKnown RBP31.24■■■□□ 2.59
TSEN54-207ENST00000580013 IQSEC2Q5JU85 1478 aa31.24■■■□□ 2.59
TSEN54-207ENST00000580013 CCER1Q8TC90 406 aaPredicted RBP31.23■■■□□ 2.59
TSEN54-207ENST00000580013 PRAG1Q86YV5 1406 aa31.21■■■□□ 2.59
TSEN54-207ENST00000580013 TMEM94Q12767 1356 aa31.2■■■□□ 2.59
TSEN54-207ENST00000580013 ASXL1Q8IXJ9 1541 aa31.2■■■□□ 2.59
TSEN54-207ENST00000580013 LRPPRCP42704 1394 aaKnown RBP31.19■■■□□ 2.58
TSEN54-207ENST00000580013 ABCC11Q96J66 1382 aa31.19■■■□□ 2.58
TSEN54-207ENST00000580013 XRN1Q8IZH2 1706 aaKnown RBP31.19■■■□□ 2.58
TSEN54-207ENST00000580013 RBM33Q96EV2 1170 aaKnown RBP31.19■■■□□ 2.58
TSEN54-207ENST00000580013 NCOA3Q9Y6Q9 1424 aa31.16■■■□□ 2.58
TSEN54-207ENST00000580013 TONSLQ96HA7 1378 aa31.16■■■□□ 2.58
TSEN54-207ENST00000580013 NBPF8Q3BBV2 869 aa31.15■■■□□ 2.58
TSEN54-207ENST00000580013 SIRT1Q96EB6 747 aa31.15■■■□□ 2.58
TSEN54-207ENST00000580013 TIMELESSQ9UNS1 1208 aa31.15■■■□□ 2.58
TSEN54-207ENST00000580013 ROBO2Q9HCK4 1378 aa31.15■■■□□ 2.58
TSEN54-207ENST00000580013 ADGRB1O14514 1584 aa31.14■■■□□ 2.58
TSEN54-207ENST00000580013 TECPR2O15040 1411 aa31.14■■■□□ 2.58
TSEN54-207ENST00000580013 YTHDC2Q9H6S0 1430 aaKnown RBP31.14■■■□□ 2.58
TSEN54-207ENST00000580013 NBPF1Q3BBV0 1214 aa31.13■■■□□ 2.57
TSEN54-207ENST00000580013 STK26Q9P289 416 aa31.13■■■□□ 2.57
TSEN54-207ENST00000580013 LAMC1P11047 1609 aa31.12■■■□□ 2.57
TSEN54-207ENST00000580013 XIRP1Q702N8 1843 aaKnown RBP31.12■■■□□ 2.57
TSEN54-207ENST00000580013 PTCH1Q13635 1447 aa31.11■■■□□ 2.57
TSEN54-207ENST00000580013 FBXO41Q8TF61 875 aa31.07■■■□□ 2.56
TSEN54-207ENST00000580013 C19orf44Q9H6X5 657 aa31.06■■■□□ 2.56
TSEN54-207ENST00000580013 KIAA1210Q9ULL0 1709 aa31.05■■■□□ 2.56
TSEN54-207ENST00000580013 WAPLQ7Z5K2 1190 aa31.05■■■□□ 2.56
TSEN54-207ENST00000580013 FAM135BQ49AJ0 1406 aa31.03■■■□□ 2.56
TSEN54-207ENST00000580013 UBAP1LF5GYI3 381 aa31.01■■■□□ 2.55
TSEN54-207ENST00000580013 TOM1O60784 492 aa31.01■■■□□ 2.55
TSEN54-207ENST00000580013 TRAK1Q9UPV9 953 aa31.01■■■□□ 2.55
TSEN54-207ENST00000580013 PLEKHH1Q9ULM0 1364 aa31.01■■■□□ 2.55
TSEN54-207ENST00000580013 DLC1Q96QB1 1528 aa30.98■■■□□ 2.55
TSEN54-207ENST00000580013 KNDC1Q76NI1 1749 aa30.98■■■□□ 2.55
TSEN54-207ENST00000580013 MSH6P52701 1360 aa30.98■■■□□ 2.55
TSEN54-207ENST00000580013 PRAM1Q96QH2 718 aa30.96■■■□□ 2.55
TSEN54-207ENST00000580013 ADGRL3Q9HAR2 1447 aa30.96■■■□□ 2.55
TSEN54-207ENST00000580013 GPRASP1Q5JY77 1395 aa30.95■■■□□ 2.55
TSEN54-207ENST00000580013 C14orf37Q86TY3 774 aa30.95■■■□□ 2.55
TSEN54-207ENST00000580013 TRPM1Q7Z4N2 1603 aa30.95■■■□□ 2.54
TSEN54-207ENST00000580013 CADPS2Q86UW7 1296 aa30.92■■■□□ 2.54
TSEN54-207ENST00000580013 DCCP43146 1447 aa30.91■■■□□ 2.54
TSEN54-207ENST00000580013 SLAIN2Q9P270 581 aa30.91■■■□□ 2.54
TSEN54-207ENST00000580013 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms