RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 USP21Q9UK80 565 aa10.44□□□□□ -0.74
CCDC178-209ENST00000579947 KIF3BO15066 747 aa10.44□□□□□ -0.74
CCDC178-209ENST00000579947 SLC34A2O95436 690 aa10.44□□□□□ -0.74
CCDC178-209ENST00000579947 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
CCDC178-209ENST00000579947 PIK3C2BO00750 1634 aa10.43□□□□□ -0.74
CCDC178-209ENST00000579947 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
CCDC178-209ENST00000579947 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
CCDC178-209ENST00000579947 ARHGAP35Q9NRY4 1499 aa10.43□□□□□ -0.74
CCDC178-209ENST00000579947 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
CCDC178-209ENST00000579947 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
CCDC178-209ENST00000579947 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
CCDC178-209ENST00000579947 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
CCDC178-209ENST00000579947 FNBP4Q8N3X1 1017 aaPredicted RBP10.42□□□□□ -0.74
CCDC178-209ENST00000579947 LRRC59Q96AG4 307 aaKnown RBP10.42□□□□□ -0.74
CCDC178-209ENST00000579947 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.41□□□□□ -0.74
CCDC178-209ENST00000579947 BRWD3Q6RI45 1802 aa10.41□□□□□ -0.74
CCDC178-209ENST00000579947 ATP1B4Q9UN42 357 aaPredicted RBP10.4□□□□□ -0.74
CCDC178-209ENST00000579947 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.75
CCDC178-209ENST00000579947 EFCAB6Q5THR3 1501 aa10.39□□□□□ -0.75
CCDC178-209ENST00000579947 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
CCDC178-209ENST00000579947 NINLQ9Y2I6 1382 aa10.38□□□□□ -0.75
CCDC178-209ENST00000579947 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
CCDC178-209ENST00000579947 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
CCDC178-209ENST00000579947 DCCP43146 1447 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 LAMC1P11047 1609 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 COL22A1Q8NFW1 1626 aaPredicted RBP10.37□□□□□ -0.75
CCDC178-209ENST00000579947 MARF1Q9Y4F3 1742 aaKnown RBP10.37□□□□□ -0.75
CCDC178-209ENST00000579947 ATF3P18847 181 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 CAMTA1Q9Y6Y1 1673 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 CEP152O94986 1710 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 GLI3P10071 1580 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 C19orf44Q9H6X5 657 aa10.37□□□□□ -0.75
CCDC178-209ENST00000579947 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
CCDC178-209ENST00000579947 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
CCDC178-209ENST00000579947 BAG6P46379 1132 aa10.36□□□□□ -0.75
CCDC178-209ENST00000579947 EIF2AK4Q9P2K8 1649 aaKnown RBP10.35□□□□□ -0.75
CCDC178-209ENST00000579947 R3HDM1Q15032 1099 aaKnown RBP10.35□□□□□ -0.75
CCDC178-209ENST00000579947 EP400Q96L91 3159 aa10.35□□□□□ -0.75
CCDC178-209ENST00000579947 GJD4Q96KN9 370 aaPredicted RBP10.35□□□□□ -0.75
CCDC178-209ENST00000579947 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
CCDC178-209ENST00000579947 ARHGAP31Q2M1Z3 1444 aa10.34□□□□□ -0.75
CCDC178-209ENST00000579947 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
CCDC178-209ENST00000579947 MST1RQ04912 1400 aa10.33□□□□□ -0.76
CCDC178-209ENST00000579947 C14orf37Q86TY3 774 aa10.32□□□□□ -0.76
CCDC178-209ENST00000579947 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
CCDC178-209ENST00000579947 DISP2A7MBM2 1401 aa10.32□□□□□ -0.76
CCDC178-209ENST00000579947 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
CCDC178-209ENST00000579947 CHD4Q14839 1912 aa10.31□□□□□ -0.76
CCDC178-209ENST00000579947 ADGRB3O60242 1522 aa10.31□□□□□ -0.76
CCDC178-209ENST00000579947 PLEKHG1Q9ULL1 1385 aa10.3□□□□□ -0.76
CCDC178-209ENST00000579947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC178-209ENST00000579947 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
CCDC178-209ENST00000579947 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
CCDC178-209ENST00000579947 TNS1Q9HBL0 1735 aaKnown RBP10.29□□□□□ -0.76
CCDC178-209ENST00000579947 MYOM2P54296 1465 aa10.28□□□□□ -0.76
CCDC178-209ENST00000579947 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
CCDC178-209ENST00000579947 CCNB3Q8WWL7 1395 aa10.27□□□□□ -0.76
CCDC178-209ENST00000579947 PIK3R4Q99570 1358 aa10.27□□□□□ -0.77
CCDC178-209ENST00000579947 GIGYF1O75420 1035 aaPredicted RBP10.27□□□□□ -0.77
CCDC178-209ENST00000579947 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
CCDC178-209ENST00000579947 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
CCDC178-209ENST00000579947 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
CCDC178-209ENST00000579947 TBX22Q9Y458 520 aa10.26□□□□□ -0.77
CCDC178-209ENST00000579947 RREB1Q92766 1687 aa10.26□□□□□ -0.77
CCDC178-209ENST00000579947 EHBP1L1Q8N3D4 1523 aa10.26□□□□□ -0.77
CCDC178-209ENST00000579947 PPP1R1BQ9UD71 204 aaPredicted RBP10.25□□□□□ -0.77
CCDC178-209ENST00000579947 ZFYVE9O95405 1425 aa10.25□□□□□ -0.77
CCDC178-209ENST00000579947 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
CCDC178-209ENST00000579947 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 TRPM2O94759 1503 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 SLIT2O94813 1529 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 KRT27Q7Z3Y8 459 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 PTPN23Q9H3S7 1636 aa10.24□□□□□ -0.77
CCDC178-209ENST00000579947 RPRD2Q5VT52 1461 aaKnown RBP10.23□□□□□ -0.77
CCDC178-209ENST00000579947 DDX17Q92841 729 aaKnown RBP10.23□□□□□ -0.77
CCDC178-209ENST00000579947 SOS2Q07890 1332 aaPredicted RBP10.23□□□□□ -0.77
CCDC178-209ENST00000579947 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
CCDC178-209ENST00000579947 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
CCDC178-209ENST00000579947 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
CCDC178-209ENST00000579947 NUP188Q5SRE5 1749 aa10.23□□□□□ -0.77
CCDC178-209ENST00000579947 BCANQ96GW7 911 aa10.23□□□□□ -0.77
CCDC178-209ENST00000579947 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
CCDC178-209ENST00000579947 UNC5CLQ8IV45 518 aa10.22□□□□□ -0.77
CCDC178-209ENST00000579947 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
CCDC178-209ENST00000579947 EEA1Q15075 1411 aa10.22□□□□□ -0.77
CCDC178-209ENST00000579947 PARD3Q8TEW0 1356 aa10.21□□□□□ -0.77
CCDC178-209ENST00000579947 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.77
CCDC178-209ENST00000579947 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.78
CCDC178-209ENST00000579947 ADAMTS13Q76LX8 1427 aa10.21□□□□□ -0.78
CCDC178-209ENST00000579947 KCNQ2O43526 872 aa10.2□□□□□ -0.78
CCDC178-209ENST00000579947 PRELPP51888 382 aa10.2□□□□□ -0.78
CCDC178-209ENST00000579947 IDI1Q13907 227 aa10.2□□□□□ -0.78
CCDC178-209ENST00000579947 FYCO1Q9BQS8 1478 aa10.19□□□□□ -0.78
CCDC178-209ENST00000579947 NRKQ7Z2Y5 1582 aa10.18□□□□□ -0.78
CCDC178-209ENST00000579947 EZH2Q15910 746 aaKnown RBP10.18□□□□□ -0.78
CCDC178-209ENST00000579947 CAMKK2Q96RR4 588 aa10.18□□□□□ -0.78
CCDC178-209ENST00000579947 NWD2Q9ULI1 1742 aa10.18□□□□□ -0.78
CCDC178-209ENST00000579947 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
CCDC178-209ENST00000579947 NALCNQ8IZF0 1738 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms