RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 RIMS2Q9UQ26 1411 aa35.86■■■■□ 3.33
CDKN2A-214ENST00000579755 KCNA6P17658 529 aa35.86■■■■□ 3.33
CDKN2A-214ENST00000579755 HSPA1LP34931 641 aa35.86■■■■□ 3.33
CDKN2A-214ENST00000579755 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.86■■■■□ 3.33
CDKN2A-214ENST00000579755 MYO5BQ9ULV0 1848 aa35.85■■■■□ 3.33
CDKN2A-214ENST00000579755 TMEM131LA2VDJ0 1609 aa35.84■■■■□ 3.33
CDKN2A-214ENST00000579755 PROSER2Q86WR7 435 aaPredicted RBP35.81■■■■□ 3.32
CDKN2A-214ENST00000579755 ZFYVE9O95405 1425 aa35.81■■■■□ 3.32
CDKN2A-214ENST00000579755 PLEKHG1Q9ULL1 1385 aa35.79■■■■□ 3.32
CDKN2A-214ENST00000579755 NAIPQ13075 1403 aa35.77■■■■□ 3.32
CDKN2A-214ENST00000579755 NUTM2DQ5VT03 806 aaPredicted RBP35.77■■■■□ 3.32
CDKN2A-214ENST00000579755 TRIM52Q96A61 297 aa35.77■■■■□ 3.32
CDKN2A-214ENST00000579755 TMEM94Q12767 1356 aa35.74■■■■□ 3.31
CDKN2A-214ENST00000579755 ALKQ9UM73 1620 aa35.72■■■■□ 3.31
CDKN2A-214ENST00000579755 TBX22Q9Y458 520 aa35.71■■■■□ 3.31
CDKN2A-214ENST00000579755 ZNF326Q5BKZ1 582 aaKnown RBP35.69■■■■□ 3.3
CDKN2A-214ENST00000579755 RBM33Q96EV2 1170 aaKnown RBP35.69■■■■□ 3.3
CDKN2A-214ENST00000579755 XIRP1Q702N8 1843 aaKnown RBP35.69■■■■□ 3.3
CDKN2A-214ENST00000579755 SPHKAPQ2M3C7 1700 aa35.69■■■■□ 3.3
CDKN2A-214ENST00000579755 HFM1A2PYH4 1435 aa35.66■■■■□ 3.3
CDKN2A-214ENST00000579755 NKTRP30414 1462 aaKnown RBP35.66■■■■□ 3.3
CDKN2A-214ENST00000579755 NWD1Q149M9 1564 aa35.62■■■■□ 3.29
CDKN2A-214ENST00000579755 ILDR2Q71H61 639 aa35.61■■■■□ 3.29
CDKN2A-214ENST00000579755 SLC4A1APQ9BWU0 796 aaKnown RBP35.6■■■■□ 3.29
CDKN2A-214ENST00000579755 MSH6P52701 1360 aa35.59■■■■□ 3.29
CDKN2A-214ENST00000579755 CHD2O14647 1828 aaKnown RBP35.59■■■■□ 3.29
CDKN2A-214ENST00000579755 C14orf37Q86TY3 774 aa35.56■■■■□ 3.28
CDKN2A-214ENST00000579755 ADAMTS13Q76LX8 1427 aa35.56■■■■□ 3.28
CDKN2A-214ENST00000579755 DIP2AQ14689 1571 aa35.54■■■■□ 3.28
CDKN2A-214ENST00000579755 PIK3R4Q99570 1358 aa35.52■■■■□ 3.28
CDKN2A-214ENST00000579755 TRPM2O94759 1503 aa35.52■■■■□ 3.28
CDKN2A-214ENST00000579755 FAM135BQ49AJ0 1406 aa35.51■■■■□ 3.28
CDKN2A-214ENST00000579755 CLTCL1P53675 1640 aa35.5■■■■□ 3.27
CDKN2A-214ENST00000579755 AMOTL2Q9Y2J4 779 aa35.49■■■■□ 3.27
CDKN2A-214ENST00000579755 KIF1BO60333 1816 aa35.47■■■■□ 3.27
CDKN2A-214ENST00000579755 MED1Q15648 1581 aaPredicted RBP35.47■■■■□ 3.27
CDKN2A-214ENST00000579755 SLAIN2Q9P270 581 aa35.46■■■■□ 3.27
CDKN2A-214ENST00000579755 PHF23Q9BUL5 403 aaPredicted RBP35.45■■■■□ 3.27
CDKN2A-214ENST00000579755 NCOA3Q9Y6Q9 1424 aa35.44■■■■□ 3.26
CDKN2A-214ENST00000579755 SOCS7O14512 581 aa35.39■■■■□ 3.26
CDKN2A-214ENST00000579755 VGFO15240 615 aaPredicted RBP35.39■■■■□ 3.26
CDKN2A-214ENST00000579755 ATF3P18847 181 aa35.39■■■■□ 3.26
CDKN2A-214ENST00000579755 C19orf44Q9H6X5 657 aa35.39■■■■□ 3.26
CDKN2A-214ENST00000579755 ROBO1Q9Y6N7 1651 aa35.39■■■■□ 3.26
CDKN2A-214ENST00000579755 SETBP1Q9Y6X0 1596 aa35.38■■■■□ 3.25
CDKN2A-214ENST00000579755 FOXD1Q16676 465 aa35.36■■■■□ 3.25
CDKN2A-214ENST00000579755 CADPS2Q86UW7 1296 aa35.36■■■■□ 3.25
CDKN2A-214ENST00000579755 NEXMIFQ5QGS0 1516 aa35.36■■■■□ 3.25
CDKN2A-214ENST00000579755 PTPRUQ92729 1446 aa35.35■■■■□ 3.25
CDKN2A-214ENST00000579755 MPHOSPH9Q99550 1183 aa35.34■■■■□ 3.25
CDKN2A-214ENST00000579755 RPGRIP1LQ68CZ1 1315 aa35.33■■■■□ 3.25
CDKN2A-214ENST00000579755 ACIN1Q9UKV3 1341 aaKnown RBP35.33■■■■□ 3.25
CDKN2A-214ENST00000579755 NRXN3Q9Y4C0 1643 aa35.33■■■■□ 3.25
CDKN2A-214ENST00000579755 METP08581 1390 aa35.31■■■■□ 3.24
CDKN2A-214ENST00000579755 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.26■■■■□ 3.24
CDKN2A-214ENST00000579755 CCDC144AA2RUR9 1427 aa35.26■■■■□ 3.24
CDKN2A-214ENST00000579755 SETD5Q9C0A6 1442 aa35.24■■■■□ 3.23
CDKN2A-214ENST00000579755 XRN1Q8IZH2 1706 aaKnown RBP35.23■■■■□ 3.23
CDKN2A-214ENST00000579755 RGL3Q3MIN7 710 aa35.22■■■■□ 3.23
CDKN2A-214ENST00000579755 PHLPP1O60346 1717 aa35.2■■■■□ 3.23
CDKN2A-214ENST00000579755 DCCP43146 1447 aa35.15■■■■□ 3.22
CDKN2A-214ENST00000579755 PPLO60437 1756 aa35.14■■■■□ 3.22
CDKN2A-214ENST00000579755 JCADQ9P266 1359 aa35.13■■■■□ 3.21
CDKN2A-214ENST00000579755 BRINP3Q76B58 766 aa35.09■■■■□ 3.21
CDKN2A-214ENST00000579755 RAB3GAP2Q9H2M9 1393 aa35.08■■■■□ 3.21
CDKN2A-214ENST00000579755 ADGRL3Q9HAR2 1447 aa35.07■■■■□ 3.21
CDKN2A-214ENST00000579755 ANKRD30BQ9BXX2 1392 aa35.07■■■■□ 3.2
CDKN2A-214ENST00000579755 ADGRF5Q8IZF2 1346 aa35.06■■■■□ 3.2
CDKN2A-214ENST00000579755 SPATA31E1Q6ZUB1 1445 aa35.05■■■■□ 3.2
CDKN2A-214ENST00000579755 COL16A1Q07092 1604 aaPredicted RBP35.03■■■■□ 3.2
CDKN2A-214ENST00000579755 MST1RQ04912 1400 aa35.03■■■■□ 3.2
CDKN2A-214ENST00000579755 PTCH1Q13635 1447 aa35.03■■■■□ 3.2
CDKN2A-214ENST00000579755 SETD1AO15047 1707 aaKnown RBP35.03■■■■□ 3.2
CDKN2A-214ENST00000579755 AHDC1Q5TGY3 1603 aaPredicted RBP35.02■■■■□ 3.2
CDKN2A-214ENST00000579755 ROBO2Q9HCK4 1378 aa35.01■■■■□ 3.2
CDKN2A-214ENST00000579755 RGS17Q9UGC6 210 aaPredicted RBP35.01■■■■□ 3.2
CDKN2A-214ENST00000579755 NALCNQ8IZF0 1738 aa34.98■■■■□ 3.19
CDKN2A-214ENST00000579755 SPATA31A6Q5VVP1 1343 aa34.98■■■■□ 3.19
CDKN2A-214ENST00000579755 STK26Q9P289 416 aa34.97■■■■□ 3.19
CDKN2A-214ENST00000579755 ASXL1Q8IXJ9 1541 aa34.96■■■■□ 3.19
CDKN2A-214ENST00000579755 MEX3CQ5U5Q3 659 aaKnown RBP34.96■■■■□ 3.19
CDKN2A-214ENST00000579755 IFT172Q9UG01 1749 aa34.92■■■■□ 3.18
CDKN2A-214ENST00000579755 PRAG1Q86YV5 1406 aa34.91■■■■□ 3.18
CDKN2A-214ENST00000579755 LRRC59Q96AG4 307 aaKnown RBP34.91■■■■□ 3.18
CDKN2A-214ENST00000579755 TMEM132EQ6IEE7 984 aa34.9■■■■□ 3.18
CDKN2A-214ENST00000579755 NUTM2BA6NNL0 878 aaPredicted RBP34.88■■■■□ 3.17
CDKN2A-214ENST00000579755 NUTM2EB1AL46 878 aaPredicted RBP34.88■■■■□ 3.17
CDKN2A-214ENST00000579755 NUTM2AQ8IVF1 878 aaPredicted RBP34.88■■■■□ 3.17
CDKN2A-214ENST00000579755 C1orf167Q5SNV9 1468 aa34.88■■■■□ 3.17
CDKN2A-214ENST00000579755 HRCP23327 699 aa34.87■■■■□ 3.17
CDKN2A-214ENST00000579755 POTEAQ6S8J7 498 aa34.87■■■■□ 3.17
CDKN2A-214ENST00000579755 DDX17Q92841 729 aaKnown RBP34.86■■■■□ 3.17
CDKN2A-214ENST00000579755 PIK3C2GO75747 1445 aa34.86■■■■□ 3.17
CDKN2A-214ENST00000579755 LRPPRCP42704 1394 aaKnown RBP34.86■■■■□ 3.17
CDKN2A-214ENST00000579755 SHPRHQ149N8 1683 aa34.86■■■■□ 3.17
CDKN2A-214ENST00000579755 NHSL1Q5SYE7 1610 aa34.84■■■■□ 3.17
CDKN2A-214ENST00000579755 WAPLQ7Z5K2 1190 aa34.83■■■■□ 3.17
CDKN2A-214ENST00000579755 ORAI2Q96SN7 254 aa34.83■■■■□ 3.17
CDKN2A-214ENST00000579755 C14orf93Q9H972 538 aaKnown RBP34.82■■■■□ 3.16
CDKN2A-214ENST00000579755 ABCC11Q96J66 1382 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms