RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
MSI2-209ENST00000579483 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
MSI2-209ENST00000579483 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
MSI2-209ENST00000579483 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
MSI2-209ENST00000579483 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
MSI2-209ENST00000579483 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
MSI2-209ENST00000579483 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
MSI2-209ENST00000579483 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
MSI2-209ENST00000579483 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
MSI2-209ENST00000579483 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
MSI2-209ENST00000579483 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
MSI2-209ENST00000579483 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
MSI2-209ENST00000579483 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.36
MSI2-209ENST00000579483 WWC1Q8IX03 1113 aa12.77□□□□□ -0.36
MSI2-209ENST00000579483 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.36
MSI2-209ENST00000579483 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
MSI2-209ENST00000579483 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
MSI2-209ENST00000579483 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
MSI2-209ENST00000579483 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
MSI2-209ENST00000579483 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
MSI2-209ENST00000579483 APBB1O00213 710 aa12.77□□□□□ -0.37
MSI2-209ENST00000579483 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
MSI2-209ENST00000579483 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 KIF14Q15058 1648 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
MSI2-209ENST00000579483 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 PRDM11Q9NQV5 511 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 E9PSI1 815 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 ERICH6BQ5W0A0 696 aa12.76□□□□□ -0.37
MSI2-209ENST00000579483 KIAA1107Q9UPP5 1409 aa12.75□□□□□ -0.37
MSI2-209ENST00000579483 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
MSI2-209ENST00000579483 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
MSI2-209ENST00000579483 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
MSI2-209ENST00000579483 C9orf78Q9NZ63 289 aaPredicted RBP12.75□□□□□ -0.37
MSI2-209ENST00000579483 GNAI1P63096 354 aa12.75□□□□□ -0.37
MSI2-209ENST00000579483 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
MSI2-209ENST00000579483 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
MSI2-209ENST00000579483 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
MSI2-209ENST00000579483 LRPPRCP42704 1394 aaKnown RBP12.74□□□□□ -0.37
MSI2-209ENST00000579483 TOM1L2Q6ZVM7 507 aa12.74□□□□□ -0.37
MSI2-209ENST00000579483 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
MSI2-209ENST00000579483 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
MSI2-209ENST00000579483 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
MSI2-209ENST00000579483 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
MSI2-209ENST00000579483 DAPK1P53355 1430 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
MSI2-209ENST00000579483 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
MSI2-209ENST00000579483 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
MSI2-209ENST00000579483 GOLGA6L6A8MZA4 724 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
MSI2-209ENST00000579483 FANCAO15360 1455 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 ERBINQ96RT1 1412 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 NRDCO43847 1150 aa12.72□□□□□ -0.37
MSI2-209ENST00000579483 RIPK4P57078 832 aa12.71□□□□□ -0.37
MSI2-209ENST00000579483 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
MSI2-209ENST00000579483 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
MSI2-209ENST00000579483 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
MSI2-209ENST00000579483 TOM1O60784 492 aa12.71□□□□□ -0.38
MSI2-209ENST00000579483 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
MSI2-209ENST00000579483 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.38
MSI2-209ENST00000579483 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
MSI2-209ENST00000579483 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
MSI2-209ENST00000579483 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
MSI2-209ENST00000579483 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
MSI2-209ENST00000579483 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
MSI2-209ENST00000579483 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
MSI2-209ENST00000579483 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
MSI2-209ENST00000579483 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
MSI2-209ENST00000579483 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
MSI2-209ENST00000579483 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
MSI2-209ENST00000579483 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
MSI2-209ENST00000579483 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
MSI2-209ENST00000579483 CLSTN1O94985 981 aa12.68□□□□□ -0.38
MSI2-209ENST00000579483 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
MSI2-209ENST00000579483 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
MSI2-209ENST00000579483 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
MSI2-209ENST00000579483 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
MSI2-209ENST00000579483 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
MSI2-209ENST00000579483 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
MSI2-209ENST00000579483 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
MSI2-209ENST00000579483 TNRQ92752 1358 aa12.65□□□□□ -0.38
MSI2-209ENST00000579483 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
MSI2-209ENST00000579483 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
MSI2-209ENST00000579483 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
MSI2-209ENST00000579483 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
MSI2-209ENST00000579483 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
MSI2-209ENST00000579483 CABP1Q9NZU7 370 aa12.65□□□□□ -0.39
MSI2-209ENST00000579483 CABP4P57796 275 aa12.64□□□□□ -0.39
MSI2-209ENST00000579483 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
MSI2-209ENST00000579483 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
MSI2-209ENST00000579483 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms