RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 RIMS2Q9UQ26 1411 aa30.68■■■□□ 2.5
SCO1-204ENST00000579396 PPP1R15AO75807 674 aaPredicted RBP30.68■■■□□ 2.5
SCO1-204ENST00000579396 DHX57Q6P158 1386 aaKnown RBP30.66■■■□□ 2.5
SCO1-204ENST00000579396 MED14O60244 1454 aa30.66■■■□□ 2.5
SCO1-204ENST00000579396 KIF1BO60333 1816 aa30.66■■■□□ 2.5
SCO1-204ENST00000579396 RGL3Q3MIN7 710 aa30.65■■■□□ 2.5
SCO1-204ENST00000579396 NPHP4O75161 1426 aaPredicted RBP30.64■■■□□ 2.5
SCO1-204ENST00000579396 ZFYVE9O95405 1425 aa30.64■■■□□ 2.49
SCO1-204ENST00000579396 VGFO15240 615 aaPredicted RBP30.62■■■□□ 2.49
SCO1-204ENST00000579396 BCANQ96GW7 911 aa30.62■■■□□ 2.49
SCO1-204ENST00000579396 NUTM2DQ5VT03 806 aaPredicted RBP30.6■■■□□ 2.49
SCO1-204ENST00000579396 MYO5BQ9ULV0 1848 aa30.6■■■□□ 2.49
SCO1-204ENST00000579396 SPATA31E1Q6ZUB1 1445 aa30.59■■■□□ 2.49
SCO1-204ENST00000579396 POLR1AO95602 1720 aaPredicted RBP30.59■■■□□ 2.49
SCO1-204ENST00000579396 CERKQ8TCT0 537 aa30.57■■■□□ 2.48
SCO1-204ENST00000579396 PLEKHG1Q9ULL1 1385 aa30.56■■■□□ 2.48
SCO1-204ENST00000579396 NEURL4Q96JN8 1562 aa30.56■■■□□ 2.48
SCO1-204ENST00000579396 STAC3Q96MF2 364 aa30.52■■■□□ 2.48
SCO1-204ENST00000579396 TBX22Q9Y458 520 aa30.5■■■□□ 2.47
SCO1-204ENST00000579396 IQGAP1P46940 1657 aa30.49■■■□□ 2.47
SCO1-204ENST00000579396 SLC26A8Q96RN1 970 aa30.49■■■□□ 2.47
SCO1-204ENST00000579396 NEXMIFQ5QGS0 1516 aa30.48■■■□□ 2.47
SCO1-204ENST00000579396 SIN3AQ96ST3 1273 aa30.48■■■□□ 2.47
SCO1-204ENST00000579396 NEUROD1Q13562 356 aa30.46■■■□□ 2.47
SCO1-204ENST00000579396 SENP3Q9H4L4 574 aaPredicted RBP30.46■■■□□ 2.47
SCO1-204ENST00000579396 DCAF11Q8TEB1 546 aa30.43■■■□□ 2.46
SCO1-204ENST00000579396 ADGRF5Q8IZF2 1346 aa30.41■■■□□ 2.46
SCO1-204ENST00000579396 ZNF335Q9H4Z2 1342 aaPredicted RBP30.41■■■□□ 2.46
SCO1-204ENST00000579396 CLSPNQ9HAW4 1339 aa30.41■■■□□ 2.46
SCO1-204ENST00000579396 KDM2AQ9Y2K7 1162 aa30.4■■■□□ 2.46
SCO1-204ENST00000579396 KCNA6P17658 529 aa30.38■■■□□ 2.45
SCO1-204ENST00000579396 PPLO60437 1756 aa30.38■■■□□ 2.45
SCO1-204ENST00000579396 ADAMTS13Q76LX8 1427 aa30.38■■■□□ 2.45
SCO1-204ENST00000579396 CCER1Q8TC90 406 aaPredicted RBP30.36■■■□□ 2.45
SCO1-204ENST00000579396 PIK3R4Q99570 1358 aa30.35■■■□□ 2.45
SCO1-204ENST00000579396 SETBP1Q9Y6X0 1596 aa30.35■■■□□ 2.45
SCO1-204ENST00000579396 L3MBTL2Q969R5 705 aa30.32■■■□□ 2.44
SCO1-204ENST00000579396 DIP2AQ14689 1571 aa30.32■■■□□ 2.44
SCO1-204ENST00000579396 MYOM2P54296 1465 aa30.31■■■□□ 2.44
SCO1-204ENST00000579396 C14orf93Q9H972 538 aaKnown RBP30.3■■■□□ 2.44
SCO1-204ENST00000579396 IFT172Q9UG01 1749 aa30.29■■■□□ 2.44
SCO1-204ENST00000579396 AMOTL2Q9Y2J4 779 aa30.27■■■□□ 2.44
SCO1-204ENST00000579396 PIK3C2GO75747 1445 aa30.27■■■□□ 2.44
SCO1-204ENST00000579396 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.44
SCO1-204ENST00000579396 LTBP4Q8N2S1 1624 aa30.26■■■□□ 2.44
SCO1-204ENST00000579396 CPS1P31327 1500 aa30.26■■■□□ 2.43
SCO1-204ENST00000579396 METP08581 1390 aa30.25■■■□□ 2.43
SCO1-204ENST00000579396 TONSLQ96HA7 1378 aa30.25■■■□□ 2.43
SCO1-204ENST00000579396 NRXN3Q9Y4C0 1643 aa30.25■■■□□ 2.43
SCO1-204ENST00000579396 ALKQ9UM73 1620 aa30.24■■■□□ 2.43
SCO1-204ENST00000579396 CFAP70Q5T0N1 1121 aa30.23■■■□□ 2.43
SCO1-204ENST00000579396 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
SCO1-204ENST00000579396 TIMELESSQ9UNS1 1208 aa30.21■■■□□ 2.43
SCO1-204ENST00000579396 PTPRUQ92729 1446 aa30.17■■■□□ 2.42
SCO1-204ENST00000579396 TMEM132EQ6IEE7 984 aa30.17■■■□□ 2.42
SCO1-204ENST00000579396 CHD2O14647 1828 aaKnown RBP30.17■■■□□ 2.42
SCO1-204ENST00000579396 IQSEC2Q5JU85 1478 aa30.16■■■□□ 2.42
SCO1-204ENST00000579396 NKTRP30414 1462 aaKnown RBP30.14■■■□□ 2.42
SCO1-204ENST00000579396 NWD1Q149M9 1564 aa30.13■■■□□ 2.41
SCO1-204ENST00000579396 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
SCO1-204ENST00000579396 STRCP1A6NGW2 1772 aa30.12■■■□□ 2.41
SCO1-204ENST00000579396 PRAG1Q86YV5 1406 aa30.12■■■□□ 2.41
SCO1-204ENST00000579396 STK26Q9P289 416 aa30.11■■■□□ 2.41
SCO1-204ENST00000579396 LRPPRCP42704 1394 aaKnown RBP30.1■■■□□ 2.41
SCO1-204ENST00000579396 TMEM94Q12767 1356 aa30.09■■■□□ 2.41
SCO1-204ENST00000579396 SIRT1Q96EB6 747 aa30.09■■■□□ 2.41
SCO1-204ENST00000579396 ABCC11Q96J66 1382 aa30.09■■■□□ 2.41
SCO1-204ENST00000579396 NCOA3Q9Y6Q9 1424 aa30.09■■■□□ 2.41
SCO1-204ENST00000579396 SETD1AO15047 1707 aaKnown RBP30.08■■■□□ 2.41
SCO1-204ENST00000579396 LAMC1P11047 1609 aa30.08■■■□□ 2.41
SCO1-204ENST00000579396 YTHDC2Q9H6S0 1430 aaKnown RBP30.05■■■□□ 2.4
SCO1-204ENST00000579396 RBM33Q96EV2 1170 aaKnown RBP30.05■■■□□ 2.4
SCO1-204ENST00000579396 C14orf37Q86TY3 774 aa30.04■■■□□ 2.4
SCO1-204ENST00000579396 NBPF1Q3BBV0 1214 aa30.02■■■□□ 2.4
SCO1-204ENST00000579396 NBPF8Q3BBV2 869 aa30.02■■■□□ 2.4
SCO1-204ENST00000579396 XRN1Q8IZH2 1706 aaKnown RBP30.02■■■□□ 2.4
SCO1-204ENST00000579396 TOM1O60784 492 aa30.01■■■□□ 2.39
SCO1-204ENST00000579396 C19orf44Q9H6X5 657 aa30.01■■■□□ 2.39
SCO1-204ENST00000579396 PTCH1Q13635 1447 aa30.01■■■□□ 2.39
SCO1-204ENST00000579396 TECPR2O15040 1411 aa30■■■□□ 2.39
SCO1-204ENST00000579396 ROBO2Q9HCK4 1378 aa30■■■□□ 2.39
SCO1-204ENST00000579396 TRAK1Q9UPV9 953 aa29.99■■■□□ 2.39
SCO1-204ENST00000579396 ASXL1Q8IXJ9 1541 aa29.98■■■□□ 2.39
SCO1-204ENST00000579396 KIAA1210Q9ULL0 1709 aa29.98■■■□□ 2.39
SCO1-204ENST00000579396 MSH6P52701 1360 aa29.98■■■□□ 2.39
SCO1-204ENST00000579396 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
SCO1-204ENST00000579396 UBAP1LF5GYI3 381 aa29.97■■■□□ 2.39
SCO1-204ENST00000579396 WAPLQ7Z5K2 1190 aa29.96■■■□□ 2.39
SCO1-204ENST00000579396 POGKQ9P215 609 aa29.95■■■□□ 2.39
SCO1-204ENST00000579396 FAM135BQ49AJ0 1406 aa29.95■■■□□ 2.38
SCO1-204ENST00000579396 ATF3P18847 181 aa29.93■■■□□ 2.38
SCO1-204ENST00000579396 ROCK2O75116 1388 aaKnown RBP29.92■■■□□ 2.38
SCO1-204ENST00000579396 DISP3Q9P2K9 1392 aa29.92■■■□□ 2.38
SCO1-204ENST00000579396 CADPS2Q86UW7 1296 aa29.92■■■□□ 2.38
SCO1-204ENST00000579396 PRAM1Q96QH2 718 aa29.92■■■□□ 2.38
SCO1-204ENST00000579396 DLC1Q96QB1 1528 aa29.89■■■□□ 2.38
SCO1-204ENST00000579396 XIRP1Q702N8 1843 aaKnown RBP29.87■■■□□ 2.37
SCO1-204ENST00000579396 CARD11Q9BXL7 1154 aa29.87■■■□□ 2.37
SCO1-204ENST00000579396 KNDC1Q76NI1 1749 aa29.87■■■□□ 2.37
SCO1-204ENST00000579396 ADGRL3Q9HAR2 1447 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms