RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
CASC3-206ENST00000579238 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
CASC3-206ENST00000579238 BCANQ96GW7 911 aa13.29□□□□□ -0.28
CASC3-206ENST00000579238 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
CASC3-206ENST00000579238 MSH6P52701 1360 aa13.28□□□□□ -0.28
CASC3-206ENST00000579238 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
CASC3-206ENST00000579238 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
CASC3-206ENST00000579238 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
CASC3-206ENST00000579238 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
CASC3-206ENST00000579238 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
CASC3-206ENST00000579238 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
CASC3-206ENST00000579238 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
CASC3-206ENST00000579238 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
CASC3-206ENST00000579238 TBX22Q9Y458 520 aa13.24□□□□□ -0.29
CASC3-206ENST00000579238 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
CASC3-206ENST00000579238 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
CASC3-206ENST00000579238 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
CASC3-206ENST00000579238 JCADQ9P266 1359 aa13.22□□□□□ -0.29
CASC3-206ENST00000579238 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
CASC3-206ENST00000579238 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
CASC3-206ENST00000579238 UNC13BO14795 1591 aa13.21□□□□□ -0.29
CASC3-206ENST00000579238 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
CASC3-206ENST00000579238 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
CASC3-206ENST00000579238 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
CASC3-206ENST00000579238 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
CASC3-206ENST00000579238 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
CASC3-206ENST00000579238 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
CASC3-206ENST00000579238 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
CASC3-206ENST00000579238 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
CASC3-206ENST00000579238 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
CASC3-206ENST00000579238 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
CASC3-206ENST00000579238 E9PCH4 1651 aa13.17□□□□□ -0.3
CASC3-206ENST00000579238 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
CASC3-206ENST00000579238 ATF3P18847 181 aa13.16□□□□□ -0.3
CASC3-206ENST00000579238 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
CASC3-206ENST00000579238 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
CASC3-206ENST00000579238 NUP155O75694 1391 aa13.15□□□□□ -0.3
CASC3-206ENST00000579238 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
CASC3-206ENST00000579238 TRPM2O94759 1503 aa13.13□□□□□ -0.31
CASC3-206ENST00000579238 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
CASC3-206ENST00000579238 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
CASC3-206ENST00000579238 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CASC3-206ENST00000579238 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
CASC3-206ENST00000579238 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
CASC3-206ENST00000579238 LRP6O75581 1613 aa13.12□□□□□ -0.31
CASC3-206ENST00000579238 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
CASC3-206ENST00000579238 DCCP43146 1447 aa13.11□□□□□ -0.31
CASC3-206ENST00000579238 SHPRHQ149N8 1683 aa13.09□□□□□ -0.31
CASC3-206ENST00000579238 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
CASC3-206ENST00000579238 ITGAEP38570 1179 aa13.09□□□□□ -0.31
CASC3-206ENST00000579238 SETBP1Q9Y6X0 1596 aa13.09□□□□□ -0.31
CASC3-206ENST00000579238 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
CASC3-206ENST00000579238 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
CASC3-206ENST00000579238 XRN1Q8IZH2 1706 aaKnown RBP13.07□□□□□ -0.32
CASC3-206ENST00000579238 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
CASC3-206ENST00000579238 METP08581 1390 aa13.06□□□□□ -0.32
CASC3-206ENST00000579238 MST1RQ04912 1400 aa13.05□□□□□ -0.32
CASC3-206ENST00000579238 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
CASC3-206ENST00000579238 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
CASC3-206ENST00000579238 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
CASC3-206ENST00000579238 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
CASC3-206ENST00000579238 RXRBP28702 533 aa13.05□□□□□ -0.32
CASC3-206ENST00000579238 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
CASC3-206ENST00000579238 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
CASC3-206ENST00000579238 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
CASC3-206ENST00000579238 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
CASC3-206ENST00000579238 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
CASC3-206ENST00000579238 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
CASC3-206ENST00000579238 AFF2P51816 1311 aa13.02□□□□□ -0.33
CASC3-206ENST00000579238 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
CASC3-206ENST00000579238 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.33
CASC3-206ENST00000579238 CLTCL1P53675 1640 aa13□□□□□ -0.33
CASC3-206ENST00000579238 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
CASC3-206ENST00000579238 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
CASC3-206ENST00000579238 DDX17Q92841 729 aaKnown RBP12.99□□□□□ -0.33
CASC3-206ENST00000579238 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
CASC3-206ENST00000579238 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
CASC3-206ENST00000579238 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
CASC3-206ENST00000579238 NAIPQ13075 1403 aa12.97□□□□□ -0.33
CASC3-206ENST00000579238 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
CASC3-206ENST00000579238 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
CASC3-206ENST00000579238 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
CASC3-206ENST00000579238 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
CASC3-206ENST00000579238 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
CASC3-206ENST00000579238 KIF1BO60333 1816 aa12.96□□□□□ -0.33
CASC3-206ENST00000579238 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
CASC3-206ENST00000579238 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
CASC3-206ENST00000579238 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
CASC3-206ENST00000579238 RPGRIP1LQ68CZ1 1315 aa12.94□□□□□ -0.34
CASC3-206ENST00000579238 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
CASC3-206ENST00000579238 LAMC1P11047 1609 aa12.94□□□□□ -0.34
CASC3-206ENST00000579238 RGS12O14924 1447 aa12.94□□□□□ -0.34
CASC3-206ENST00000579238 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
CASC3-206ENST00000579238 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
CASC3-206ENST00000579238 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
CASC3-206ENST00000579238 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
CASC3-206ENST00000579238 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
CASC3-206ENST00000579238 USP21Q9UK80 565 aa12.89□□□□□ -0.35
CASC3-206ENST00000579238 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
CASC3-206ENST00000579238 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms