RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
SSH2-208ENST00000579040 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
SSH2-208ENST00000579040 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
SSH2-208ENST00000579040 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
SSH2-208ENST00000579040 NKTRP30414 1462 aaKnown RBP17.53■□□□□ 0.4
SSH2-208ENST00000579040 KCNA6P17658 529 aa17.53■□□□□ 0.4
SSH2-208ENST00000579040 CHD2O14647 1828 aaKnown RBP17.52■□□□□ 0.4
SSH2-208ENST00000579040 HSPA1LP34931 641 aa17.52■□□□□ 0.4
SSH2-208ENST00000579040 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.4
SSH2-208ENST00000579040 NAIPQ13075 1403 aa17.51■□□□□ 0.39
SSH2-208ENST00000579040 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSH2-208ENST00000579040 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
SSH2-208ENST00000579040 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
SSH2-208ENST00000579040 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
SSH2-208ENST00000579040 BCANQ96GW7 911 aa17.49■□□□□ 0.39
SSH2-208ENST00000579040 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
SSH2-208ENST00000579040 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
SSH2-208ENST00000579040 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
SSH2-208ENST00000579040 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
SSH2-208ENST00000579040 TRPM2O94759 1503 aa17.45■□□□□ 0.38
SSH2-208ENST00000579040 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
SSH2-208ENST00000579040 KIF1BO60333 1816 aa17.44■□□□□ 0.38
SSH2-208ENST00000579040 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
SSH2-208ENST00000579040 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
SSH2-208ENST00000579040 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
SSH2-208ENST00000579040 FAM135BQ49AJ0 1406 aa17.42■□□□□ 0.38
SSH2-208ENST00000579040 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
SSH2-208ENST00000579040 MSH6P52701 1360 aa17.4■□□□□ 0.38
SSH2-208ENST00000579040 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
SSH2-208ENST00000579040 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
SSH2-208ENST00000579040 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
SSH2-208ENST00000579040 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
SSH2-208ENST00000579040 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
SSH2-208ENST00000579040 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
SSH2-208ENST00000579040 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
SSH2-208ENST00000579040 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
SSH2-208ENST00000579040 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
SSH2-208ENST00000579040 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
SSH2-208ENST00000579040 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
SSH2-208ENST00000579040 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
SSH2-208ENST00000579040 SOCS7O14512 581 aa17.33■□□□□ 0.36
SSH2-208ENST00000579040 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
SSH2-208ENST00000579040 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
SSH2-208ENST00000579040 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
SSH2-208ENST00000579040 PPLO60437 1756 aa17.3■□□□□ 0.36
SSH2-208ENST00000579040 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
SSH2-208ENST00000579040 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
SSH2-208ENST00000579040 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
SSH2-208ENST00000579040 C19orf44Q9H6X5 657 aa17.29■□□□□ 0.36
SSH2-208ENST00000579040 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
SSH2-208ENST00000579040 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
SSH2-208ENST00000579040 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
SSH2-208ENST00000579040 DCCP43146 1447 aa17.28■□□□□ 0.36
SSH2-208ENST00000579040 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
SSH2-208ENST00000579040 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
SSH2-208ENST00000579040 METP08581 1390 aa17.27■□□□□ 0.35
SSH2-208ENST00000579040 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
SSH2-208ENST00000579040 ATF3P18847 181 aa17.25■□□□□ 0.35
SSH2-208ENST00000579040 COL16A1Q07092 1604 aaPredicted RBP17.24■□□□□ 0.35
SSH2-208ENST00000579040 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
SSH2-208ENST00000579040 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
SSH2-208ENST00000579040 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
SSH2-208ENST00000579040 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
SSH2-208ENST00000579040 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
SSH2-208ENST00000579040 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
SSH2-208ENST00000579040 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
SSH2-208ENST00000579040 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.34
SSH2-208ENST00000579040 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.34
SSH2-208ENST00000579040 JCADQ9P266 1359 aa17.2■□□□□ 0.34
SSH2-208ENST00000579040 FOXD1Q16676 465 aa17.2■□□□□ 0.34
SSH2-208ENST00000579040 SPATA31E1Q6ZUB1 1445 aa17.19■□□□□ 0.34
SSH2-208ENST00000579040 SHPRHQ149N8 1683 aa17.18■□□□□ 0.34
SSH2-208ENST00000579040 MST1RQ04912 1400 aa17.18■□□□□ 0.34
SSH2-208ENST00000579040 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
SSH2-208ENST00000579040 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
SSH2-208ENST00000579040 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
SSH2-208ENST00000579040 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
SSH2-208ENST00000579040 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
SSH2-208ENST00000579040 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
SSH2-208ENST00000579040 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
SSH2-208ENST00000579040 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
SSH2-208ENST00000579040 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
SSH2-208ENST00000579040 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
SSH2-208ENST00000579040 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
SSH2-208ENST00000579040 LAMC1P11047 1609 aa17.1■□□□□ 0.33
SSH2-208ENST00000579040 PIK3C2GO75747 1445 aa17.1■□□□□ 0.33
SSH2-208ENST00000579040 TECPR2O15040 1411 aa17.09■□□□□ 0.33
SSH2-208ENST00000579040 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
SSH2-208ENST00000579040 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
SSH2-208ENST00000579040 LRP6O75581 1613 aa17.07■□□□□ 0.32
SSH2-208ENST00000579040 MYOM2P54296 1465 aa17.07■□□□□ 0.32
SSH2-208ENST00000579040 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
SSH2-208ENST00000579040 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
SSH2-208ENST00000579040 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
SSH2-208ENST00000579040 HRCP23327 699 aa17.04■□□□□ 0.32
SSH2-208ENST00000579040 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
SSH2-208ENST00000579040 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
SSH2-208ENST00000579040 MEX3CQ5U5Q3 659 aaKnown RBP17.02■□□□□ 0.32
SSH2-208ENST00000579040 YTHDC2Q9H6S0 1430 aaKnown RBP17.01■□□□□ 0.31
SSH2-208ENST00000579040 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms