RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 MED14O60244 1454 aa22.6■■□□□ 1.21
IFT20-208ENST00000578985 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
IFT20-208ENST00000578985 HDGFP51858 240 aaKnown RBP22.6■■□□□ 1.21
IFT20-208ENST00000578985 ANKRD30BQ9BXX2 1392 aa22.6■■□□□ 1.21
IFT20-208ENST00000578985 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
IFT20-208ENST00000578985 ZNF326Q5BKZ1 582 aaKnown RBP22.59■■□□□ 1.21
IFT20-208ENST00000578985 IQGAP1P46940 1657 aa22.58■■□□□ 1.21
IFT20-208ENST00000578985 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
IFT20-208ENST00000578985 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
IFT20-208ENST00000578985 NUTM2DQ5VT03 806 aaPredicted RBP22.53■■□□□ 1.2
IFT20-208ENST00000578985 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
IFT20-208ENST00000578985 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.19
IFT20-208ENST00000578985 RPGRIP1LQ68CZ1 1315 aa22.51■■□□□ 1.19
IFT20-208ENST00000578985 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
IFT20-208ENST00000578985 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
IFT20-208ENST00000578985 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
IFT20-208ENST00000578985 BCANQ96GW7 911 aa22.5■■□□□ 1.19
IFT20-208ENST00000578985 PPLO60437 1756 aa22.49■■□□□ 1.19
IFT20-208ENST00000578985 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
IFT20-208ENST00000578985 VGFO15240 615 aaPredicted RBP22.45■■□□□ 1.18
IFT20-208ENST00000578985 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
IFT20-208ENST00000578985 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
IFT20-208ENST00000578985 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
IFT20-208ENST00000578985 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
IFT20-208ENST00000578985 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
IFT20-208ENST00000578985 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
IFT20-208ENST00000578985 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
IFT20-208ENST00000578985 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.18
IFT20-208ENST00000578985 DIP2AQ14689 1571 aa22.39■■□□□ 1.18
IFT20-208ENST00000578985 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
IFT20-208ENST00000578985 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
IFT20-208ENST00000578985 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
IFT20-208ENST00000578985 CHD2O14647 1828 aaKnown RBP22.35■■□□□ 1.17
IFT20-208ENST00000578985 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
IFT20-208ENST00000578985 CPS1P31327 1500 aa22.34■■□□□ 1.17
IFT20-208ENST00000578985 KCNA6P17658 529 aa22.33■■□□□ 1.17
IFT20-208ENST00000578985 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
IFT20-208ENST00000578985 MYOM2P54296 1465 aa22.33■■□□□ 1.16
IFT20-208ENST00000578985 DCAF11Q8TEB1 546 aa22.32■■□□□ 1.16
IFT20-208ENST00000578985 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
IFT20-208ENST00000578985 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
IFT20-208ENST00000578985 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
IFT20-208ENST00000578985 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
IFT20-208ENST00000578985 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
IFT20-208ENST00000578985 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
IFT20-208ENST00000578985 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
IFT20-208ENST00000578985 METP08581 1390 aa22.28■■□□□ 1.16
IFT20-208ENST00000578985 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
IFT20-208ENST00000578985 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
IFT20-208ENST00000578985 PTPRUQ92729 1446 aa22.25■■□□□ 1.15
IFT20-208ENST00000578985 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
IFT20-208ENST00000578985 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
IFT20-208ENST00000578985 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
IFT20-208ENST00000578985 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
IFT20-208ENST00000578985 L3MBTL2Q969R5 705 aa22.24■■□□□ 1.15
IFT20-208ENST00000578985 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
IFT20-208ENST00000578985 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
IFT20-208ENST00000578985 LAMC1P11047 1609 aa22.22■■□□□ 1.15
IFT20-208ENST00000578985 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
IFT20-208ENST00000578985 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
IFT20-208ENST00000578985 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
IFT20-208ENST00000578985 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
IFT20-208ENST00000578985 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
IFT20-208ENST00000578985 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
IFT20-208ENST00000578985 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
IFT20-208ENST00000578985 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
IFT20-208ENST00000578985 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
IFT20-208ENST00000578985 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
IFT20-208ENST00000578985 LRPPRCP42704 1394 aaKnown RBP22.14■■□□□ 1.14
IFT20-208ENST00000578985 STK26Q9P289 416 aa22.14■■□□□ 1.13
IFT20-208ENST00000578985 KIAA1210Q9ULL0 1709 aa22.13■■□□□ 1.13
IFT20-208ENST00000578985 YTHDC2Q9H6S0 1430 aaKnown RBP22.13■■□□□ 1.13
IFT20-208ENST00000578985 ILDR2Q71H61 639 aa22.12■■□□□ 1.13
IFT20-208ENST00000578985 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
IFT20-208ENST00000578985 NCOA3Q9Y6Q9 1424 aa22.12■■□□□ 1.13
IFT20-208ENST00000578985 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
IFT20-208ENST00000578985 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
IFT20-208ENST00000578985 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
IFT20-208ENST00000578985 UBAP1LF5GYI3 381 aa22.1■■□□□ 1.13
IFT20-208ENST00000578985 ADGRB1O14514 1584 aa22.1■■□□□ 1.13
IFT20-208ENST00000578985 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
IFT20-208ENST00000578985 TECPR2O15040 1411 aa22.09■■□□□ 1.13
IFT20-208ENST00000578985 MSH6P52701 1360 aa22.08■■□□□ 1.12
IFT20-208ENST00000578985 TOM1O60784 492 aa22.07■■□□□ 1.12
IFT20-208ENST00000578985 DISP3Q9P2K9 1392 aa22.06■■□□□ 1.12
IFT20-208ENST00000578985 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
IFT20-208ENST00000578985 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
IFT20-208ENST00000578985 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
IFT20-208ENST00000578985 TRPM1Q7Z4N2 1603 aa22.05■■□□□ 1.12
IFT20-208ENST00000578985 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
IFT20-208ENST00000578985 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
IFT20-208ENST00000578985 SIRT1Q96EB6 747 aa22.04■■□□□ 1.12
IFT20-208ENST00000578985 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
IFT20-208ENST00000578985 NALCNQ8IZF0 1738 aa22.03■■□□□ 1.12
IFT20-208ENST00000578985 DLC1Q96QB1 1528 aa22.02■■□□□ 1.12
IFT20-208ENST00000578985 SOCS7O14512 581 aa22.02■■□□□ 1.12
IFT20-208ENST00000578985 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
IFT20-208ENST00000578985 FAM135BQ49AJ0 1406 aa22.02■■□□□ 1.12
IFT20-208ENST00000578985 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
IFT20-208ENST00000578985 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms