RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 PTGDRQ13258 359 aa6.5□□□□□ -1.37
GAPLINC-201ENST00000578664 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
GAPLINC-201ENST00000578664 MS4A1P11836 297 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 TTLL12Q14166 644 aaPredicted RBP6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 PPP4R3BQ5MIZ7 849 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 C6orf132Q5T0Z8 1188 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 GIGYF2Q6Y7W6 1299 aaKnown RBP6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 CCDC125Q86Z20 511 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 RBM33Q96EV2 1170 aaKnown RBP6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 FAM163AQ96GL9 167 aaPredicted RBP6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 BCL2L12Q9HB09 334 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 CDHR5Q9HBB8 845 aa6.49□□□□□ -1.37
GAPLINC-201ENST00000578664 NUTM2FA1L443 756 aa6.48□□□□□ -1.37
GAPLINC-201ENST00000578664 MAP3K7O43318 606 aa6.48□□□□□ -1.37
GAPLINC-201ENST00000578664 SND1Q7KZF4 910 aaKnown RBP eCLIP6.48□□□□□ -1.37
GAPLINC-201ENST00000578664 FCHSD2O94868 740 aa6.47□□□□□ -1.37
GAPLINC-201ENST00000578664 EMP3P54852 163 aa6.47□□□□□ -1.37
GAPLINC-201ENST00000578664 HIC1Q14526 733 aa6.47□□□□□ -1.37
GAPLINC-201ENST00000578664 MARVELD3Q96A59 401 aa6.47□□□□□ -1.37
GAPLINC-201ENST00000578664 RBM47A0AV96 593 aaKnown RBP6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 POTEB3A0JP26 581 aa6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 VARS2Q5ST30 1063 aaKnown RBP6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 POTEBQ6S5H4 581 aa6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 WWC1Q8IX03 1113 aa6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 PBXIP1Q96AQ6 731 aa6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 CALR3Q96L12 384 aaKnown RBP6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 ERBB3P21860 1342 aa6.46□□□□□ -1.38
GAPLINC-201ENST00000578664 POTEEQ6S8J3 1075 aa6.45□□□□□ -1.38
GAPLINC-201ENST00000578664 CERKQ8TCT0 537 aa6.45□□□□□ -1.38
GAPLINC-201ENST00000578664 UNCXA6NJT0 531 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 CSB-PGBD3P0DP91 1061 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 COL9A1P20849 921 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 FECHP22830 423 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 TTC13Q8NBP0 860 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 MYT1LQ9UL68 1186 aa6.44□□□□□ -1.38
GAPLINC-201ENST00000578664 FAM205CA6NFA0 338 aa6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 PTPREP23469 700 aa6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 ZNF687Q8N1G0 1237 aa6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 HS3ST6Q96QI5 342 aa6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 TMUB1Q9BVT8 246 aa6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
GAPLINC-201ENST00000578664 PPP1R3GB7ZBB8 358 aa6.42□□□□□ -1.38
GAPLINC-201ENST00000578664 TMEM259Q4ZIN3 620 aa6.42□□□□□ -1.38
GAPLINC-201ENST00000578664 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
GAPLINC-201ENST00000578664 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
GAPLINC-201ENST00000578664 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 PBX2P40425 430 aa6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 PRSS12P56730 875 aa6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 SRPK2P78362 688 aaKnown RBP6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 REPIN1Q9BWE0 567 aaKnown RBP6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 IVNS1ABPQ9Y6Y0 642 aa6.41□□□□□ -1.38
GAPLINC-201ENST00000578664 SOCS7O14512 581 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 ERCC3P19447 782 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 CLCN1P35523 988 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 KCNK17Q96T54 332 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 SLC4A5Q9BY07 1137 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 SNRKQ9NRH2 765 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 FAM198AQ9UFP1 575 aa6.4□□□□□ -1.38
GAPLINC-201ENST00000578664 PPM1GO15355 546 aaPredicted RBP6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 PSEN2P49810 448 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 GLMNQ92990 594 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 CDCA7LQ96GN5 454 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 ZBED2Q9BTP6 218 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 PRM3Q9NNZ6 103 aa6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 GNEQ9Y223 722 aaKnown RBP6.39□□□□□ -1.39
GAPLINC-201ENST00000578664 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
GAPLINC-201ENST00000578664 TSKSQ9UJT2 592 aa6.38□□□□□ -1.39
GAPLINC-201ENST00000578664 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 BRD2P25440 801 aaKnown RBP6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 SSTR3P32745 418 aaPredicted RBP6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 DMRTA1Q5VZB9 504 aa6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 DRC1Q96MC2 740 aa6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 ATP1B4Q9UN42 357 aaPredicted RBP6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 AXIN2Q9Y2T1 843 aa6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 ADGRG1Q9Y653 693 aa6.37□□□□□ -1.39
GAPLINC-201ENST00000578664 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 RFC5P40937 340 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 PROX2Q3B8N5 592 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 KCNH8Q96L42 1107 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 GDPD2Q9HCC8 539 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 GPCPD1Q9NPB8 672 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 POLR3EQ9NVU0 708 aa6.36□□□□□ -1.39
GAPLINC-201ENST00000578664 CADPSQ9ULU8 1353 aa6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 PPP2R2DQ66LE6 453 aa6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 SPATA32Q96LK8 384 aa6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 PHOX2BQ99453 314 aa6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 EYA1Q99502 592 aa6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 KIAA1522Q9P206 1035 aaPredicted RBP6.35□□□□□ -1.39
GAPLINC-201ENST00000578664 TK2O00142 265 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 OATP04181 439 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 FAM161AQ3B820 660 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 METTL3Q86U44 580 aaKnown RBP6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 TXNDC2Q86VQ3 553 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 PXYLP1Q8TE99 480 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 SIRT1Q96EB6 747 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 C8orf37Q96NL8 207 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 BEGAINQ9BUH8 593 aa6.34□□□□□ -1.39
GAPLINC-201ENST00000578664 VPS9D1Q9Y2B5 631 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms