RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
SLC6A4-204ENST00000578609 NEXMIFQ5QGS0 1516 aa22.54■■□□□ 1.2
SLC6A4-204ENST00000578609 LTBP4Q8N2S1 1624 aa22.53■■□□□ 1.2
SLC6A4-204ENST00000578609 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
SLC6A4-204ENST00000578609 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.2
SLC6A4-204ENST00000578609 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
SLC6A4-204ENST00000578609 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.2
SLC6A4-204ENST00000578609 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
SLC6A4-204ENST00000578609 ZNF335Q9H4Z2 1342 aaPredicted RBP22.49■■□□□ 1.19
SLC6A4-204ENST00000578609 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
SLC6A4-204ENST00000578609 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
SLC6A4-204ENST00000578609 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
SLC6A4-204ENST00000578609 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
SLC6A4-204ENST00000578609 PPLO60437 1756 aa22.45■■□□□ 1.18
SLC6A4-204ENST00000578609 CPS1P31327 1500 aa22.44■■□□□ 1.18
SLC6A4-204ENST00000578609 RPGRIP1LQ68CZ1 1315 aa22.44■■□□□ 1.18
SLC6A4-204ENST00000578609 ADAMTS13Q76LX8 1427 aa22.44■■□□□ 1.18
SLC6A4-204ENST00000578609 NRXN3Q9Y4C0 1643 aa22.44■■□□□ 1.18
SLC6A4-204ENST00000578609 IFT172Q9UG01 1749 aa22.43■■□□□ 1.18
SLC6A4-204ENST00000578609 NUTM2DQ5VT03 806 aaPredicted RBP22.42■■□□□ 1.18
SLC6A4-204ENST00000578609 NWD1Q149M9 1564 aa22.41■■□□□ 1.18
SLC6A4-204ENST00000578609 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
SLC6A4-204ENST00000578609 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
SLC6A4-204ENST00000578609 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.17
SLC6A4-204ENST00000578609 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
SLC6A4-204ENST00000578609 CERKQ8TCT0 537 aa22.38■■□□□ 1.17
SLC6A4-204ENST00000578609 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
SLC6A4-204ENST00000578609 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
SLC6A4-204ENST00000578609 MYOM2P54296 1465 aa22.35■■□□□ 1.17
SLC6A4-204ENST00000578609 BCANQ96GW7 911 aa22.35■■□□□ 1.17
SLC6A4-204ENST00000578609 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
SLC6A4-204ENST00000578609 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
SLC6A4-204ENST00000578609 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
SLC6A4-204ENST00000578609 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
SLC6A4-204ENST00000578609 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
SLC6A4-204ENST00000578609 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
SLC6A4-204ENST00000578609 NRXN1Q9ULB1 1477 aa22.32■■□□□ 1.16
SLC6A4-204ENST00000578609 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
SLC6A4-204ENST00000578609 KCNA6P17658 529 aa22.31■■□□□ 1.16
SLC6A4-204ENST00000578609 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
SLC6A4-204ENST00000578609 ALKQ9UM73 1620 aa22.3■■□□□ 1.16
SLC6A4-204ENST00000578609 XRN1Q8IZH2 1706 aaKnown RBP22.29■■□□□ 1.16
SLC6A4-204ENST00000578609 PCGF6Q9BYE7 350 aa22.29■■□□□ 1.16
SLC6A4-204ENST00000578609 ADGRF5Q8IZF2 1346 aa22.29■■□□□ 1.16
SLC6A4-204ENST00000578609 METP08581 1390 aa22.27■■□□□ 1.16
SLC6A4-204ENST00000578609 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
SLC6A4-204ENST00000578609 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
SLC6A4-204ENST00000578609 LAMC1P11047 1609 aa22.24■■□□□ 1.15
SLC6A4-204ENST00000578609 XIRP1Q702N8 1843 aaKnown RBP22.23■■□□□ 1.15
SLC6A4-204ENST00000578609 ASXL1Q8IXJ9 1541 aa22.22■■□□□ 1.15
SLC6A4-204ENST00000578609 FBXO41Q8TF61 875 aa22.21■■□□□ 1.15
SLC6A4-204ENST00000578609 STAC3Q96MF2 364 aa22.21■■□□□ 1.15
SLC6A4-204ENST00000578609 TMEM94Q12767 1356 aa22.21■■□□□ 1.15
SLC6A4-204ENST00000578609 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
SLC6A4-204ENST00000578609 PTCH1Q13635 1447 aa22.18■■□□□ 1.14
SLC6A4-204ENST00000578609 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
SLC6A4-204ENST00000578609 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
SLC6A4-204ENST00000578609 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
SLC6A4-204ENST00000578609 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
SLC6A4-204ENST00000578609 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
SLC6A4-204ENST00000578609 TECPR2O15040 1411 aa22.14■■□□□ 1.14
SLC6A4-204ENST00000578609 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
SLC6A4-204ENST00000578609 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
SLC6A4-204ENST00000578609 LRPPRCP42704 1394 aaKnown RBP22.12■■□□□ 1.13
SLC6A4-204ENST00000578609 CFAP70Q5T0N1 1121 aa22.11■■□□□ 1.13
SLC6A4-204ENST00000578609 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
SLC6A4-204ENST00000578609 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
SLC6A4-204ENST00000578609 UBAP1LF5GYI3 381 aa22.1■■□□□ 1.13
SLC6A4-204ENST00000578609 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
SLC6A4-204ENST00000578609 RBM33Q96EV2 1170 aaKnown RBP22.1■■□□□ 1.13
SLC6A4-204ENST00000578609 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
SLC6A4-204ENST00000578609 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
SLC6A4-204ENST00000578609 MSH6P52701 1360 aa22.09■■□□□ 1.13
SLC6A4-204ENST00000578609 ABCC11Q96J66 1382 aa22.09■■□□□ 1.13
SLC6A4-204ENST00000578609 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
SLC6A4-204ENST00000578609 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
SLC6A4-204ENST00000578609 TOM1O60784 492 aa22.07■■□□□ 1.12
SLC6A4-204ENST00000578609 DCCP43146 1447 aa22.06■■□□□ 1.12
SLC6A4-204ENST00000578609 ADGRL3Q9HAR2 1447 aa22.06■■□□□ 1.12
SLC6A4-204ENST00000578609 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
SLC6A4-204ENST00000578609 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
SLC6A4-204ENST00000578609 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
SLC6A4-204ENST00000578609 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
SLC6A4-204ENST00000578609 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
SLC6A4-204ENST00000578609 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
SLC6A4-204ENST00000578609 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
SLC6A4-204ENST00000578609 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
SLC6A4-204ENST00000578609 C14orf37Q86TY3 774 aa22■■□□□ 1.11
SLC6A4-204ENST00000578609 SIRT1Q96EB6 747 aa22■■□□□ 1.11
SLC6A4-204ENST00000578609 STK26Q9P289 416 aa22■■□□□ 1.11
SLC6A4-204ENST00000578609 TRPM1Q7Z4N2 1603 aa21.99■■□□□ 1.11
SLC6A4-204ENST00000578609 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
SLC6A4-204ENST00000578609 PLEKHH1Q9ULM0 1364 aa21.98■■□□□ 1.11
SLC6A4-204ENST00000578609 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
SLC6A4-204ENST00000578609 PIP4K2BP78356 416 aa21.96■■□□□ 1.11
SLC6A4-204ENST00000578609 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
SLC6A4-204ENST00000578609 ATF3P18847 181 aa21.94■■□□□ 1.1
SLC6A4-204ENST00000578609 MST1RQ04912 1400 aa21.94■■□□□ 1.1
SLC6A4-204ENST00000578609 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
SLC6A4-204ENST00000578609 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms