RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 TXNDC2Q86VQ3 553 aa20.49■□□□□ 0.87
CSNK1D-208ENST00000578501 EID1Q9Y6B2 187 aa20.49■□□□□ 0.87
CSNK1D-208ENST00000578501 LTKP29376 864 aa20.48■□□□□ 0.87
CSNK1D-208ENST00000578501 STRCP1A6NGW2 1772 aa20.47■□□□□ 0.87
CSNK1D-208ENST00000578501 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-208ENST00000578501 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
CSNK1D-208ENST00000578501 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
CSNK1D-208ENST00000578501 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
CSNK1D-208ENST00000578501 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-208ENST00000578501 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.86
CSNK1D-208ENST00000578501 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
CSNK1D-208ENST00000578501 POTEAQ6S8J7 498 aa20.39■□□□□ 0.85
CSNK1D-208ENST00000578501 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-208ENST00000578501 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
CSNK1D-208ENST00000578501 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
CSNK1D-208ENST00000578501 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-208ENST00000578501 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSNK1D-208ENST00000578501 TRPM2O94759 1503 aa20.36■□□□□ 0.85
CSNK1D-208ENST00000578501 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
CSNK1D-208ENST00000578501 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
CSNK1D-208ENST00000578501 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
CSNK1D-208ENST00000578501 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
CSNK1D-208ENST00000578501 KCNA6P17658 529 aa20.31■□□□□ 0.84
CSNK1D-208ENST00000578501 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-208ENST00000578501 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-208ENST00000578501 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
CSNK1D-208ENST00000578501 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-208ENST00000578501 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
CSNK1D-208ENST00000578501 HRCP23327 699 aa20.28■□□□□ 0.84
CSNK1D-208ENST00000578501 SLC26A8Q96RN1 970 aa20.28■□□□□ 0.84
CSNK1D-208ENST00000578501 BCANQ96GW7 911 aa20.26■□□□□ 0.83
CSNK1D-208ENST00000578501 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
CSNK1D-208ENST00000578501 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
CSNK1D-208ENST00000578501 FOXD1Q16676 465 aa20.24■□□□□ 0.83
CSNK1D-208ENST00000578501 ZNF326Q5BKZ1 582 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-208ENST00000578501 JCADQ9P266 1359 aa20.23■□□□□ 0.83
CSNK1D-208ENST00000578501 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
CSNK1D-208ENST00000578501 KIF1BO60333 1816 aa20.23■□□□□ 0.83
CSNK1D-208ENST00000578501 MSH6P52701 1360 aa20.22■□□□□ 0.83
CSNK1D-208ENST00000578501 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
CSNK1D-208ENST00000578501 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
CSNK1D-208ENST00000578501 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
CSNK1D-208ENST00000578501 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
CSNK1D-208ENST00000578501 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
CSNK1D-208ENST00000578501 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-208ENST00000578501 NEXMIFQ5QGS0 1516 aa20.2■□□□□ 0.82
CSNK1D-208ENST00000578501 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
CSNK1D-208ENST00000578501 PIK3R4Q99570 1358 aa20.2■□□□□ 0.82
CSNK1D-208ENST00000578501 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
CSNK1D-208ENST00000578501 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-208ENST00000578501 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-208ENST00000578501 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-208ENST00000578501 SPATA31A6Q5VVP1 1343 aa20.15■□□□□ 0.82
CSNK1D-208ENST00000578501 CHD2O14647 1828 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-208ENST00000578501 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
CSNK1D-208ENST00000578501 UPF1Q92900 1129 aaKnown RBP eCLIP20.14■□□□□ 0.819e-10■■■■■ 41.2
CSNK1D-208ENST00000578501 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
CSNK1D-208ENST00000578501 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
CSNK1D-208ENST00000578501 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
CSNK1D-208ENST00000578501 MEX3CQ5U5Q3 659 aaKnown RBP20.13■□□□□ 0.81
CSNK1D-208ENST00000578501 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
CSNK1D-208ENST00000578501 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
CSNK1D-208ENST00000578501 PPLO60437 1756 aa20.08■□□□□ 0.81
CSNK1D-208ENST00000578501 AMOTL2Q9Y2J4 779 aa20.08■□□□□ 0.81
CSNK1D-208ENST00000578501 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
CSNK1D-208ENST00000578501 METP08581 1390 aa20.08■□□□□ 0.8
CSNK1D-208ENST00000578501 RXRBP28702 533 aa20.07■□□□□ 0.8
CSNK1D-208ENST00000578501 RGL3Q3MIN7 710 aa20.07■□□□□ 0.8
CSNK1D-208ENST00000578501 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
CSNK1D-208ENST00000578501 CADPS2Q86UW7 1296 aa20.05■□□□□ 0.8
CSNK1D-208ENST00000578501 COL16A1Q07092 1604 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-208ENST00000578501 LRP6O75581 1613 aa20.03■□□□□ 0.8
CSNK1D-208ENST00000578501 XRN1Q8IZH2 1706 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-208ENST00000578501 ATF3P18847 181 aa20.02■□□□□ 0.8
CSNK1D-208ENST00000578501 C19orf44Q9H6X5 657 aa20.02■□□□□ 0.8
CSNK1D-208ENST00000578501 IFT172Q9UG01 1749 aa20.02■□□□□ 0.79
CSNK1D-208ENST00000578501 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.79
CSNK1D-208ENST00000578501 CDK12Q9NYV4 1490 aaPredicted RBP20.01■□□□□ 0.79
CSNK1D-208ENST00000578501 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
CSNK1D-208ENST00000578501 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
CSNK1D-208ENST00000578501 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
CSNK1D-208ENST00000578501 MYOM2P54296 1465 aa19.97■□□□□ 0.79
CSNK1D-208ENST00000578501 SHPRHQ149N8 1683 aa19.97■□□□□ 0.79
CSNK1D-208ENST00000578501 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
CSNK1D-208ENST00000578501 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
CSNK1D-208ENST00000578501 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
CSNK1D-208ENST00000578501 NUTM2BA6NNL0 878 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-208ENST00000578501 NUTM2EB1AL46 878 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-208ENST00000578501 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-208ENST00000578501 NUTM2AQ8IVF1 878 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-208ENST00000578501 DCCP43146 1447 aa19.93■□□□□ 0.78
CSNK1D-208ENST00000578501 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
CSNK1D-208ENST00000578501 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-208ENST00000578501 AFF2P51816 1311 aa19.92■□□□□ 0.78
CSNK1D-208ENST00000578501 BRINP3Q76B58 766 aa19.91■□□□□ 0.78
CSNK1D-208ENST00000578501 ROBO2Q9HCK4 1378 aa19.91■□□□□ 0.78
CSNK1D-208ENST00000578501 ADGRL3Q9HAR2 1447 aa19.9■□□□□ 0.78
CSNK1D-208ENST00000578501 TECPR2O15040 1411 aa19.89■□□□□ 0.77
CSNK1D-208ENST00000578501 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
CSNK1D-208ENST00000578501 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms