RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
CTC1-204ENST00000578441 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
CTC1-204ENST00000578441 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
CTC1-204ENST00000578441 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
CTC1-204ENST00000578441 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
CTC1-204ENST00000578441 TMEM131LA2VDJ0 1609 aa15.6■□□□□ 0.09
CTC1-204ENST00000578441 PLEKHG1Q9ULL1 1385 aa15.6■□□□□ 0.09
CTC1-204ENST00000578441 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.09
CTC1-204ENST00000578441 SLC26A8Q96RN1 970 aa15.58■□□□□ 0.08
CTC1-204ENST00000578441 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
CTC1-204ENST00000578441 MYO5BQ9ULV0 1848 aa15.58■□□□□ 0.08
CTC1-204ENST00000578441 ROBO1Q9Y6N7 1651 aa15.57■□□□□ 0.08
CTC1-204ENST00000578441 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
CTC1-204ENST00000578441 E9PCH4 1651 aa15.57■□□□□ 0.08
CTC1-204ENST00000578441 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTC1-204ENST00000578441 MSH6P52701 1360 aa15.56■□□□□ 0.08
CTC1-204ENST00000578441 RIMS2Q9UQ26 1411 aa15.56■□□□□ 0.08
CTC1-204ENST00000578441 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
CTC1-204ENST00000578441 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
CTC1-204ENST00000578441 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
CTC1-204ENST00000578441 JCADQ9P266 1359 aa15.53■□□□□ 0.08
CTC1-204ENST00000578441 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
CTC1-204ENST00000578441 BCANQ96GW7 911 aa15.53■□□□□ 0.08
CTC1-204ENST00000578441 PIK3R4Q99570 1358 aa15.52■□□□□ 0.08
CTC1-204ENST00000578441 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
CTC1-204ENST00000578441 ADAMTS13Q76LX8 1427 aa15.48■□□□□ 0.07
CTC1-204ENST00000578441 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
CTC1-204ENST00000578441 NUP155O75694 1391 aa15.48■□□□□ 0.07
CTC1-204ENST00000578441 TRPM2O94759 1503 aa15.48■□□□□ 0.07
CTC1-204ENST00000578441 SPATA31A6Q5VVP1 1343 aa15.47■□□□□ 0.07
CTC1-204ENST00000578441 ZNF772Q68DY9 489 aaPredicted RBP15.47■□□□□ 0.07
CTC1-204ENST00000578441 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTC1-204ENST00000578441 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.06
CTC1-204ENST00000578441 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
CTC1-204ENST00000578441 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
CTC1-204ENST00000578441 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
CTC1-204ENST00000578441 C19orf44Q9H6X5 657 aa15.44■□□□□ 0.06
CTC1-204ENST00000578441 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
CTC1-204ENST00000578441 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
CTC1-204ENST00000578441 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
CTC1-204ENST00000578441 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
CTC1-204ENST00000578441 DCCP43146 1447 aa15.43■□□□□ 0.06
CTC1-204ENST00000578441 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
CTC1-204ENST00000578441 AHDC1Q5TGY3 1603 aaPredicted RBP15.42■□□□□ 0.06
CTC1-204ENST00000578441 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
CTC1-204ENST00000578441 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
CTC1-204ENST00000578441 ATF3P18847 181 aa15.4■□□□□ 0.06
CTC1-204ENST00000578441 C14orf37Q86TY3 774 aa15.4■□□□□ 0.06
CTC1-204ENST00000578441 SHPRHQ149N8 1683 aa15.39■□□□□ 0.05
CTC1-204ENST00000578441 LRP6O75581 1613 aa15.39■□□□□ 0.05
CTC1-204ENST00000578441 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
CTC1-204ENST00000578441 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
CTC1-204ENST00000578441 ITGAEP38570 1179 aa15.37■□□□□ 0.05
CTC1-204ENST00000578441 PTPRUQ92729 1446 aa15.36■□□□□ 0.05
CTC1-204ENST00000578441 RXRBP28702 533 aa15.36■□□□□ 0.05
CTC1-204ENST00000578441 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
CTC1-204ENST00000578441 MEX3CQ5U5Q3 659 aaKnown RBP15.35■□□□□ 0.05
CTC1-204ENST00000578441 KIF1BO60333 1816 aa15.35■□□□□ 0.05
CTC1-204ENST00000578441 NEXMIFQ5QGS0 1516 aa15.34■□□□□ 0.05
CTC1-204ENST00000578441 CLTCL1P53675 1640 aa15.34■□□□□ 0.05
CTC1-204ENST00000578441 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
CTC1-204ENST00000578441 NAIPQ13075 1403 aa15.33■□□□□ 0.04
CTC1-204ENST00000578441 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
CTC1-204ENST00000578441 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
CTC1-204ENST00000578441 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
CTC1-204ENST00000578441 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
CTC1-204ENST00000578441 ADGRL3Q9HAR2 1447 aa15.31■□□□□ 0.04
CTC1-204ENST00000578441 HFM1A2PYH4 1435 aa15.3■□□□□ 0.04
CTC1-204ENST00000578441 METP08581 1390 aa15.3■□□□□ 0.04
CTC1-204ENST00000578441 MST1RQ04912 1400 aa15.3■□□□□ 0.04
CTC1-204ENST00000578441 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
CTC1-204ENST00000578441 PRAG1Q86YV5 1406 aa15.29■□□□□ 0.04
CTC1-204ENST00000578441 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
CTC1-204ENST00000578441 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
CTC1-204ENST00000578441 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
CTC1-204ENST00000578441 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.04
CTC1-204ENST00000578441 LAMC1P11047 1609 aa15.26■□□□□ 0.03
CTC1-204ENST00000578441 SRCAPQ6ZRS2 3230 aa15.26■□□□□ 0.03
CTC1-204ENST00000578441 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
CTC1-204ENST00000578441 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
CTC1-204ENST00000578441 AFF2P51816 1311 aa15.24■□□□□ 0.03
CTC1-204ENST00000578441 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
CTC1-204ENST00000578441 PPLO60437 1756 aa15.24■□□□□ 0.03
CTC1-204ENST00000578441 FOXD1Q16676 465 aa15.23■□□□□ 0.03
CTC1-204ENST00000578441 RGS12O14924 1447 aa15.22■□□□□ 0.03
CTC1-204ENST00000578441 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
CTC1-204ENST00000578441 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
CTC1-204ENST00000578441 QTRT2Q9H974 415 aaKnown RBP15.2■□□□□ 0.02
CTC1-204ENST00000578441 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
CTC1-204ENST00000578441 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
CTC1-204ENST00000578441 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
CTC1-204ENST00000578441 NGLY1Q96IV0 654 aa15.19■□□□□ 0.02
CTC1-204ENST00000578441 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
CTC1-204ENST00000578441 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
CTC1-204ENST00000578441 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
CTC1-204ENST00000578441 CDC42BPGQ6DT37 1551 aa15.17■□□□□ 0.02
CTC1-204ENST00000578441 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
CTC1-204ENST00000578441 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
CTC1-204ENST00000578441 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
CTC1-204ENST00000578441 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms