RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 KCNA6P17658 529 aa11.53□□□□□ -0.56
CCR7-202ENST00000578085 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
CCR7-202ENST00000578085 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
CCR7-202ENST00000578085 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.56
CCR7-202ENST00000578085 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.56
CCR7-202ENST00000578085 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.57
CCR7-202ENST00000578085 RIMS2Q9UQ26 1411 aa11.51□□□□□ -0.57
CCR7-202ENST00000578085 E9PCH4 1651 aa11.5□□□□□ -0.57
CCR7-202ENST00000578085 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
CCR7-202ENST00000578085 SLC52A1Q9NWF4 448 aa11.5□□□□□ -0.57
CCR7-202ENST00000578085 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
CCR7-202ENST00000578085 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
CCR7-202ENST00000578085 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
CCR7-202ENST00000578085 CHD2O14647 1828 aaKnown RBP11.46□□□□□ -0.57
CCR7-202ENST00000578085 ROCK1Q13464 1354 aa11.46□□□□□ -0.57
CCR7-202ENST00000578085 NUTM2DQ5VT03 806 aaPredicted RBP11.46□□□□□ -0.57
CCR7-202ENST00000578085 MSH6P52701 1360 aa11.45□□□□□ -0.58
CCR7-202ENST00000578085 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
CCR7-202ENST00000578085 BCANQ96GW7 911 aa11.45□□□□□ -0.58
CCR7-202ENST00000578085 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
CCR7-202ENST00000578085 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
CCR7-202ENST00000578085 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
CCR7-202ENST00000578085 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
CCR7-202ENST00000578085 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
CCR7-202ENST00000578085 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
CCR7-202ENST00000578085 LRP6O75581 1613 aa11.42□□□□□ -0.58
CCR7-202ENST00000578085 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
CCR7-202ENST00000578085 DIP2AQ14689 1571 aa11.42□□□□□ -0.58
CCR7-202ENST00000578085 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
CCR7-202ENST00000578085 TBX22Q9Y458 520 aa11.42□□□□□ -0.58
CCR7-202ENST00000578085 ITGAEP38570 1179 aa11.41□□□□□ -0.58
CCR7-202ENST00000578085 NUP155O75694 1391 aa11.41□□□□□ -0.58
CCR7-202ENST00000578085 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
CCR7-202ENST00000578085 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
CCR7-202ENST00000578085 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
CCR7-202ENST00000578085 NCOA3Q9Y6Q9 1424 aa11.39□□□□□ -0.59
CCR7-202ENST00000578085 TRPM2O94759 1503 aa11.39□□□□□ -0.59
CCR7-202ENST00000578085 JCADQ9P266 1359 aa11.39□□□□□ -0.59
CCR7-202ENST00000578085 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
CCR7-202ENST00000578085 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCR7-202ENST00000578085 PIK3R4Q99570 1358 aa11.38□□□□□ -0.59
CCR7-202ENST00000578085 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
CCR7-202ENST00000578085 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
CCR7-202ENST00000578085 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
CCR7-202ENST00000578085 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
CCR7-202ENST00000578085 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
CCR7-202ENST00000578085 METP08581 1390 aa11.36□□□□□ -0.59
CCR7-202ENST00000578085 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
CCR7-202ENST00000578085 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
CCR7-202ENST00000578085 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 MST1RQ04912 1400 aa11.34□□□□□ -0.59
CCR7-202ENST00000578085 NAIPQ13075 1403 aa11.33□□□□□ -0.6
CCR7-202ENST00000578085 ATF3P18847 181 aa11.32□□□□□ -0.6
CCR7-202ENST00000578085 DCCP43146 1447 aa11.32□□□□□ -0.6
CCR7-202ENST00000578085 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
CCR7-202ENST00000578085 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
CCR7-202ENST00000578085 NALCNQ8IZF0 1738 aa11.32□□□□□ -0.6
CCR7-202ENST00000578085 NHSL1Q5SYE7 1610 aa11.31□□□□□ -0.6
CCR7-202ENST00000578085 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
CCR7-202ENST00000578085 ZNF326Q5BKZ1 582 aaKnown RBP11.29□□□□□ -0.6
CCR7-202ENST00000578085 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
CCR7-202ENST00000578085 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
CCR7-202ENST00000578085 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
CCR7-202ENST00000578085 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
CCR7-202ENST00000578085 MEX3CQ5U5Q3 659 aaKnown RBP11.27□□□□□ -0.61
CCR7-202ENST00000578085 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
CCR7-202ENST00000578085 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
CCR7-202ENST00000578085 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
CCR7-202ENST00000578085 PNPLA6Q8IY17 1366 aa11.26□□□□□ -0.61
CCR7-202ENST00000578085 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
CCR7-202ENST00000578085 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
CCR7-202ENST00000578085 C1orf167Q5SNV9 1468 aa11.25□□□□□ -0.61
CCR7-202ENST00000578085 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
CCR7-202ENST00000578085 AFF2P51816 1311 aa11.24□□□□□ -0.61
CCR7-202ENST00000578085 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
CCR7-202ENST00000578085 LAMC1P11047 1609 aa11.24□□□□□ -0.61
CCR7-202ENST00000578085 KIF1BO60333 1816 aa11.23□□□□□ -0.61
CCR7-202ENST00000578085 UPF1Q92900 1129 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCR7-202ENST00000578085 RGS12O14924 1447 aa11.22□□□□□ -0.61
CCR7-202ENST00000578085 PPLO60437 1756 aa11.22□□□□□ -0.61
CCR7-202ENST00000578085 CDK12Q9NYV4 1490 aaPredicted RBP11.21□□□□□ -0.61
CCR7-202ENST00000578085 FOXD1Q16676 465 aa11.21□□□□□ -0.61
CCR7-202ENST00000578085 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
CCR7-202ENST00000578085 RXRBP28702 533 aa11.2□□□□□ -0.62
CCR7-202ENST00000578085 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
CCR7-202ENST00000578085 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
CCR7-202ENST00000578085 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
CCR7-202ENST00000578085 SOS2Q07890 1332 aaPredicted RBP11.18□□□□□ -0.62
CCR7-202ENST00000578085 ADGRF5Q8IZF2 1346 aa11.18□□□□□ -0.62
CCR7-202ENST00000578085 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
CCR7-202ENST00000578085 CDC42BPGQ6DT37 1551 aa11.18□□□□□ -0.62
CCR7-202ENST00000578085 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
CCR7-202ENST00000578085 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
CCR7-202ENST00000578085 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
CCR7-202ENST00000578085 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
CCR7-202ENST00000578085 IFT172Q9UG01 1749 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms