RNA–Protein interactions for RNA: ENST00000578015.1

PSMD12-204, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 2

Gene PSMD12, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-204ENST00000578015 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
PSMD12-204ENST00000578015 NWD1Q149M9 1564 aa25.89■■□□□ 1.73
PSMD12-204ENST00000578015 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
PSMD12-204ENST00000578015 POTEAQ6S8J7 498 aa25.87■■□□□ 1.73
PSMD12-204ENST00000578015 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
PSMD12-204ENST00000578015 PPP1R15AO75807 674 aaPredicted RBP25.84■■□□□ 1.73
PSMD12-204ENST00000578015 ADGRL2O95490 1459 aa25.84■■□□□ 1.73
PSMD12-204ENST00000578015 JCADQ9P266 1359 aa25.83■■□□□ 1.73
PSMD12-204ENST00000578015 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
PSMD12-204ENST00000578015 NCOA3Q9Y6Q9 1424 aa25.81■■□□□ 1.72
PSMD12-204ENST00000578015 ANKRD50Q9ULJ7 1429 aa25.8■■□□□ 1.72
PSMD12-204ENST00000578015 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
PSMD12-204ENST00000578015 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
PSMD12-204ENST00000578015 TBX22Q9Y458 520 aa25.79■■□□□ 1.72
PSMD12-204ENST00000578015 RIMS2Q9UQ26 1411 aa25.78■■□□□ 1.72
PSMD12-204ENST00000578015 PHLPP1O60346 1717 aa25.77■■□□□ 1.72
PSMD12-204ENST00000578015 CHD2O14647 1828 aaKnown RBP25.76■■□□□ 1.71
PSMD12-204ENST00000578015 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
PSMD12-204ENST00000578015 C14orf37Q86TY3 774 aa25.74■■□□□ 1.71
PSMD12-204ENST00000578015 SPATA31A6Q5VVP1 1343 aa25.73■■□□□ 1.71
PSMD12-204ENST00000578015 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
PSMD12-204ENST00000578015 PIK3R4Q99570 1358 aa25.71■■□□□ 1.71
PSMD12-204ENST00000578015 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
PSMD12-204ENST00000578015 C19orf44Q9H6X5 657 aa25.71■■□□□ 1.71
PSMD12-204ENST00000578015 GCC2Q8IWJ2 1684 aa25.69■■□□□ 1.7
PSMD12-204ENST00000578015 CHGAP10645 457 aaKnown RBP25.69■■□□□ 1.7
PSMD12-204ENST00000578015 ATF3P18847 181 aa25.69■■□□□ 1.7
PSMD12-204ENST00000578015 ZNF772Q68DY9 489 aaPredicted RBP25.69■■□□□ 1.7
PSMD12-204ENST00000578015 MEX3CQ5U5Q3 659 aaKnown RBP25.68■■□□□ 1.7
PSMD12-204ENST00000578015 MYO5BQ9ULV0 1848 aa25.67■■□□□ 1.7
PSMD12-204ENST00000578015 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
PSMD12-204ENST00000578015 COL16A1Q07092 1604 aaPredicted RBP25.66■■□□□ 1.7
PSMD12-204ENST00000578015 ADAMTS13Q76LX8 1427 aa25.63■■□□□ 1.69
PSMD12-204ENST00000578015 UNC13BO14795 1591 aa25.62■■□□□ 1.69
PSMD12-204ENST00000578015 AHDC1Q5TGY3 1603 aaPredicted RBP25.61■■□□□ 1.69
PSMD12-204ENST00000578015 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.59■■□□□ 1.69
PSMD12-204ENST00000578015 TRPM2O94759 1503 aa25.58■■□□□ 1.69
PSMD12-204ENST00000578015 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
PSMD12-204ENST00000578015 ROCK1Q13464 1354 aa25.57■■□□□ 1.68
PSMD12-204ENST00000578015 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
PSMD12-204ENST00000578015 LRP6O75581 1613 aa25.57■■□□□ 1.68
PSMD12-204ENST00000578015 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
PSMD12-204ENST00000578015 SHPRHQ149N8 1683 aa25.57■■□□□ 1.68
PSMD12-204ENST00000578015 DCCP43146 1447 aa25.56■■□□□ 1.68
PSMD12-204ENST00000578015 E9PCH4 1651 aa25.56■■□□□ 1.68
PSMD12-204ENST00000578015 BRINP3Q76B58 766 aa25.54■■□□□ 1.68
PSMD12-204ENST00000578015 IQGAP3Q86VI3 1631 aa25.53■■□□□ 1.68
PSMD12-204ENST00000578015 RXRBP28702 533 aa25.53■■□□□ 1.68
PSMD12-204ENST00000578015 UPF1Q92900 1129 aaKnown RBP eCLIP25.52■■□□□ 1.68
PSMD12-204ENST00000578015 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
PSMD12-204ENST00000578015 NUP155O75694 1391 aa25.52■■□□□ 1.68
PSMD12-204ENST00000578015 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
PSMD12-204ENST00000578015 PTPRUQ92729 1446 aa25.47■■□□□ 1.67
PSMD12-204ENST00000578015 NUTM2BA6NNL0 878 aaPredicted RBP25.47■■□□□ 1.67
PSMD12-204ENST00000578015 NUTM2EB1AL46 878 aaPredicted RBP25.47■■□□□ 1.67
PSMD12-204ENST00000578015 NUTM2AQ8IVF1 878 aaPredicted RBP25.47■■□□□ 1.67
PSMD12-204ENST00000578015 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
PSMD12-204ENST00000578015 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
PSMD12-204ENST00000578015 ASXL1Q8IXJ9 1541 aa25.44■■□□□ 1.66
PSMD12-204ENST00000578015 SETBP1Q9Y6X0 1596 aa25.44■■□□□ 1.66
PSMD12-204ENST00000578015 ZNF326Q5BKZ1 582 aaKnown RBP25.43■■□□□ 1.66
PSMD12-204ENST00000578015 AFF2P51816 1311 aa25.41■■□□□ 1.66
PSMD12-204ENST00000578015 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
PSMD12-204ENST00000578015 MST1RQ04912 1400 aa25.41■■□□□ 1.66
PSMD12-204ENST00000578015 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
PSMD12-204ENST00000578015 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
PSMD12-204ENST00000578015 ADGRL3Q9HAR2 1447 aa25.36■■□□□ 1.65
PSMD12-204ENST00000578015 METP08581 1390 aa25.35■■□□□ 1.65
PSMD12-204ENST00000578015 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
PSMD12-204ENST00000578015 ITGAEP38570 1179 aa25.34■■□□□ 1.65
PSMD12-204ENST00000578015 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
PSMD12-204ENST00000578015 C8orf37Q96NL8 207 aa25.33■■□□□ 1.65
PSMD12-204ENST00000578015 QTRT2Q9H974 415 aaKnown RBP25.33■■□□□ 1.65
PSMD12-204ENST00000578015 PNPLA6Q8IY17 1366 aa25.31■■□□□ 1.64
PSMD12-204ENST00000578015 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
PSMD12-204ENST00000578015 VGFO15240 615 aaPredicted RBP25.25■■□□□ 1.63
PSMD12-204ENST00000578015 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
PSMD12-204ENST00000578015 RGS12O14924 1447 aa25.25■■□□□ 1.63
PSMD12-204ENST00000578015 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
PSMD12-204ENST00000578015 NEXMIFQ5QGS0 1516 aa25.25■■□□□ 1.63
PSMD12-204ENST00000578015 PTCH1Q13635 1447 aa25.23■■□□□ 1.63
PSMD12-204ENST00000578015 NALCNQ8IZF0 1738 aa25.23■■□□□ 1.63
PSMD12-204ENST00000578015 ADAMTS2O95450 1211 aa25.22■■□□□ 1.63
PSMD12-204ENST00000578015 FOXD1Q16676 465 aa25.22■■□□□ 1.63
PSMD12-204ENST00000578015 SOS2Q07890 1332 aaPredicted RBP25.21■■□□□ 1.63
PSMD12-204ENST00000578015 CLTCL1P53675 1640 aa25.2■■□□□ 1.62
PSMD12-204ENST00000578015 LAMC1P11047 1609 aa25.19■■□□□ 1.62
PSMD12-204ENST00000578015 ATAD2Q6PL18 1390 aa25.19■■□□□ 1.62
PSMD12-204ENST00000578015 KIF1BO60333 1816 aa25.19■■□□□ 1.62
PSMD12-204ENST00000578015 TRPC5Q9UL62 973 aaPredicted RBP25.19■■□□□ 1.62
PSMD12-204ENST00000578015 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
PSMD12-204ENST00000578015 USP21Q9UK80 565 aa25.18■■□□□ 1.62
PSMD12-204ENST00000578015 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
PSMD12-204ENST00000578015 ORAI2Q96SN7 254 aa25.16■■□□□ 1.62
PSMD12-204ENST00000578015 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
PSMD12-204ENST00000578015 FNBP4Q8N3X1 1017 aaPredicted RBP25.15■■□□□ 1.62
PSMD12-204ENST00000578015 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
PSMD12-204ENST00000578015 NPHP3Q7Z494 1330 aa25.11■■□□□ 1.61
PSMD12-204ENST00000578015 CCDC125Q86Z20 511 aa25.08■■□□□ 1.61
PSMD12-204ENST00000578015 NAIPQ13075 1403 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms