RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 KCNA6P17658 529 aa21■□□□□ 0.95
CUEDC1-203ENST00000577422 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
CUEDC1-203ENST00000577422 IQGAP3Q86VI3 1631 aa20.99■□□□□ 0.95
CUEDC1-203ENST00000577422 NKTRP30414 1462 aaKnown RBP20.96■□□□□ 0.95
CUEDC1-203ENST00000577422 PLEKHG1Q9ULL1 1385 aa20.96■□□□□ 0.95
CUEDC1-203ENST00000577422 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.95
CUEDC1-203ENST00000577422 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
CUEDC1-203ENST00000577422 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
CUEDC1-203ENST00000577422 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
CUEDC1-203ENST00000577422 CHD2O14647 1828 aaKnown RBP20.92■□□□□ 0.94
CUEDC1-203ENST00000577422 ROBO1Q9Y6N7 1651 aa20.9■□□□□ 0.94
CUEDC1-203ENST00000577422 ADAMTS13Q76LX8 1427 aa20.9■□□□□ 0.94
CUEDC1-203ENST00000577422 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
CUEDC1-203ENST00000577422 NUP155O75694 1391 aa20.87■□□□□ 0.93
CUEDC1-203ENST00000577422 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
CUEDC1-203ENST00000577422 RGS17Q9UGC6 210 aaPredicted RBP20.87■□□□□ 0.93
CUEDC1-203ENST00000577422 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
CUEDC1-203ENST00000577422 ITGAEP38570 1179 aa20.84■□□□□ 0.93
CUEDC1-203ENST00000577422 BCANQ96GW7 911 aa20.83■□□□□ 0.93
CUEDC1-203ENST00000577422 DIP2AQ14689 1571 aa20.83■□□□□ 0.92
CUEDC1-203ENST00000577422 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 MSH6P52701 1360 aa20.82■□□□□ 0.92
CUEDC1-203ENST00000577422 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
CUEDC1-203ENST00000577422 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
CUEDC1-203ENST00000577422 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
CUEDC1-203ENST00000577422 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
CUEDC1-203ENST00000577422 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
CUEDC1-203ENST00000577422 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
CUEDC1-203ENST00000577422 PIK3R4Q99570 1358 aa20.79■□□□□ 0.92
CUEDC1-203ENST00000577422 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
CUEDC1-203ENST00000577422 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.76■□□□□ 0.91
CUEDC1-203ENST00000577422 SETBP1Q9Y6X0 1596 aa20.76■□□□□ 0.91
CUEDC1-203ENST00000577422 TRPM2O94759 1503 aa20.75■□□□□ 0.91
CUEDC1-203ENST00000577422 NAIPQ13075 1403 aa20.75■□□□□ 0.91
CUEDC1-203ENST00000577422 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
CUEDC1-203ENST00000577422 COL16A1Q07092 1604 aaPredicted RBP20.75■□□□□ 0.91
CUEDC1-203ENST00000577422 CLTCL1P53675 1640 aa20.74■□□□□ 0.91
CUEDC1-203ENST00000577422 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
CUEDC1-203ENST00000577422 NEXMIFQ5QGS0 1516 aa20.71■□□□□ 0.91
CUEDC1-203ENST00000577422 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
CUEDC1-203ENST00000577422 POTEAQ6S8J7 498 aa20.69■□□□□ 0.9
CUEDC1-203ENST00000577422 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
CUEDC1-203ENST00000577422 AHDC1Q5TGY3 1603 aaPredicted RBP20.68■□□□□ 0.9
CUEDC1-203ENST00000577422 METP08581 1390 aa20.68■□□□□ 0.9
CUEDC1-203ENST00000577422 JCADQ9P266 1359 aa20.67■□□□□ 0.9
CUEDC1-203ENST00000577422 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
CUEDC1-203ENST00000577422 LRP6O75581 1613 aa20.64■□□□□ 0.9
CUEDC1-203ENST00000577422 HFM1A2PYH4 1435 aa20.64■□□□□ 0.89
CUEDC1-203ENST00000577422 DCCP43146 1447 aa20.64■□□□□ 0.89
CUEDC1-203ENST00000577422 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
CUEDC1-203ENST00000577422 SETD1AO15047 1707 aaKnown RBP20.62■□□□□ 0.89
CUEDC1-203ENST00000577422 ZNF326Q5BKZ1 582 aaKnown RBP20.62■□□□□ 0.89
CUEDC1-203ENST00000577422 ATF3P18847 181 aa20.61■□□□□ 0.89
CUEDC1-203ENST00000577422 BRINP3Q76B58 766 aa20.61■□□□□ 0.89
CUEDC1-203ENST00000577422 KIF1BO60333 1816 aa20.61■□□□□ 0.89
CUEDC1-203ENST00000577422 MST1RQ04912 1400 aa20.61■□□□□ 0.89
CUEDC1-203ENST00000577422 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
CUEDC1-203ENST00000577422 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.89
CUEDC1-203ENST00000577422 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.89
CUEDC1-203ENST00000577422 NHSL1Q5SYE7 1610 aa20.57■□□□□ 0.88
CUEDC1-203ENST00000577422 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
CUEDC1-203ENST00000577422 ADGRL3Q9HAR2 1447 aa20.56■□□□□ 0.88
CUEDC1-203ENST00000577422 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
CUEDC1-203ENST00000577422 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
CUEDC1-203ENST00000577422 PPLO60437 1756 aa20.52■□□□□ 0.88
CUEDC1-203ENST00000577422 PTCH1Q13635 1447 aa20.52■□□□□ 0.87
CUEDC1-203ENST00000577422 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
CUEDC1-203ENST00000577422 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
CUEDC1-203ENST00000577422 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
CUEDC1-203ENST00000577422 VGFO15240 615 aaPredicted RBP20.48■□□□□ 0.87
CUEDC1-203ENST00000577422 LAMC1P11047 1609 aa20.48■□□□□ 0.87
CUEDC1-203ENST00000577422 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
CUEDC1-203ENST00000577422 FOXD1Q16676 465 aa20.47■□□□□ 0.87
CUEDC1-203ENST00000577422 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
CUEDC1-203ENST00000577422 C1orf167Q5SNV9 1468 aa20.47■□□□□ 0.87
CUEDC1-203ENST00000577422 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
CUEDC1-203ENST00000577422 PNPLA6Q8IY17 1366 aa20.43■□□□□ 0.86
CUEDC1-203ENST00000577422 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
CUEDC1-203ENST00000577422 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
CUEDC1-203ENST00000577422 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
CUEDC1-203ENST00000577422 LRRC59Q96AG4 307 aaKnown RBP20.41■□□□□ 0.86
CUEDC1-203ENST00000577422 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
CUEDC1-203ENST00000577422 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
CUEDC1-203ENST00000577422 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
CUEDC1-203ENST00000577422 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
CUEDC1-203ENST00000577422 ORAI2Q96SN7 254 aa20.38■□□□□ 0.85
CUEDC1-203ENST00000577422 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
CUEDC1-203ENST00000577422 SOS2Q07890 1332 aaPredicted RBP20.37■□□□□ 0.85
CUEDC1-203ENST00000577422 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
CUEDC1-203ENST00000577422 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
CUEDC1-203ENST00000577422 TECPR2O15040 1411 aa20.36■□□□□ 0.85
CUEDC1-203ENST00000577422 AFF2P51816 1311 aa20.36■□□□□ 0.85
CUEDC1-203ENST00000577422 CDK12Q9NYV4 1490 aaPredicted RBP20.35■□□□□ 0.85
CUEDC1-203ENST00000577422 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
CUEDC1-203ENST00000577422 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
CUEDC1-203ENST00000577422 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms