RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 KIF1BO60333 1816 aa29.34■■■□□ 2.29
SUPT4H1-202ENST00000577396 POLR1AO95602 1720 aaPredicted RBP29.33■■■□□ 2.29
SUPT4H1-202ENST00000577396 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
SUPT4H1-202ENST00000577396 HDGFP51858 240 aaKnown RBP29.32■■■□□ 2.28
SUPT4H1-202ENST00000577396 ZNF326Q5BKZ1 582 aaKnown RBP29.31■■■□□ 2.28
SUPT4H1-202ENST00000577396 NPHP4O75161 1426 aaPredicted RBP29.3■■■□□ 2.28
SUPT4H1-202ENST00000577396 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.3■■■□□ 2.28
SUPT4H1-202ENST00000577396 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
SUPT4H1-202ENST00000577396 RPGRIP1LQ68CZ1 1315 aa29.26■■■□□ 2.28
SUPT4H1-202ENST00000577396 RGL3Q3MIN7 710 aa29.26■■■□□ 2.27
SUPT4H1-202ENST00000577396 NEXMIFQ5QGS0 1516 aa29.24■■■□□ 2.27
SUPT4H1-202ENST00000577396 PLEKHG1Q9ULL1 1385 aa29.23■■■□□ 2.27
SUPT4H1-202ENST00000577396 PPP1R15AO75807 674 aaPredicted RBP29.22■■■□□ 2.27
SUPT4H1-202ENST00000577396 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
SUPT4H1-202ENST00000577396 VGFO15240 615 aaPredicted RBP29.18■■■□□ 2.26
SUPT4H1-202ENST00000577396 SIN3AQ96ST3 1273 aa29.16■■■□□ 2.26
SUPT4H1-202ENST00000577396 SLC26A8Q96RN1 970 aa29.16■■■□□ 2.26
SUPT4H1-202ENST00000577396 SENP3Q9H4L4 574 aaPredicted RBP29.16■■■□□ 2.26
SUPT4H1-202ENST00000577396 PPLO60437 1756 aa29.13■■■□□ 2.25
SUPT4H1-202ENST00000577396 ADAMTS13Q76LX8 1427 aa29.13■■■□□ 2.25
SUPT4H1-202ENST00000577396 BCANQ96GW7 911 aa29.12■■■□□ 2.25
SUPT4H1-202ENST00000577396 TBX22Q9Y458 520 aa29.12■■■□□ 2.25
SUPT4H1-202ENST00000577396 ZNF335Q9H4Z2 1342 aaPredicted RBP29.12■■■□□ 2.25
SUPT4H1-202ENST00000577396 ADGRF5Q8IZF2 1346 aa29.11■■■□□ 2.25
SUPT4H1-202ENST00000577396 IFT172Q9UG01 1749 aa29.09■■■□□ 2.25
SUPT4H1-202ENST00000577396 SETBP1Q9Y6X0 1596 aa29.07■■■□□ 2.24
SUPT4H1-202ENST00000577396 NRXN3Q9Y4C0 1643 aa29.06■■■□□ 2.24
SUPT4H1-202ENST00000577396 NEUROD1Q13562 356 aa29.06■■■□□ 2.24
SUPT4H1-202ENST00000577396 DCAF11Q8TEB1 546 aa29.05■■■□□ 2.24
SUPT4H1-202ENST00000577396 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
SUPT4H1-202ENST00000577396 STAC3Q96MF2 364 aa29.03■■■□□ 2.24
SUPT4H1-202ENST00000577396 MYOM2P54296 1465 aa29.02■■■□□ 2.24
SUPT4H1-202ENST00000577396 NRXN1Q9ULB1 1477 aa29.01■■■□□ 2.24
SUPT4H1-202ENST00000577396 KCNA6P17658 529 aa29.01■■■□□ 2.23
SUPT4H1-202ENST00000577396 KDM2AQ9Y2K7 1162 aa29.01■■■□□ 2.23
SUPT4H1-202ENST00000577396 DIP2AQ14689 1571 aa29■■■□□ 2.23
SUPT4H1-202ENST00000577396 PIK3C2GO75747 1445 aa28.99■■■□□ 2.23
SUPT4H1-202ENST00000577396 L3MBTL2Q969R5 705 aa28.98■■■□□ 2.23
SUPT4H1-202ENST00000577396 METP08581 1390 aa28.98■■■□□ 2.23
SUPT4H1-202ENST00000577396 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
SUPT4H1-202ENST00000577396 CLSPNQ9HAW4 1339 aa28.97■■■□□ 2.23
SUPT4H1-202ENST00000577396 STRCP1A6NGW2 1772 aa28.97■■■□□ 2.23
SUPT4H1-202ENST00000577396 ALKQ9UM73 1620 aa28.97■■■□□ 2.23
SUPT4H1-202ENST00000577396 C14orf93Q9H972 538 aaKnown RBP28.94■■■□□ 2.22
SUPT4H1-202ENST00000577396 PTPRUQ92729 1446 aa28.94■■■□□ 2.22
SUPT4H1-202ENST00000577396 CERKQ8TCT0 537 aa28.93■■■□□ 2.22
SUPT4H1-202ENST00000577396 CHD2O14647 1828 aaKnown RBP28.93■■■□□ 2.22
SUPT4H1-202ENST00000577396 SETD1AO15047 1707 aaKnown RBP28.92■■■□□ 2.22
SUPT4H1-202ENST00000577396 CPS1P31327 1500 aa28.92■■■□□ 2.22
SUPT4H1-202ENST00000577396 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
SUPT4H1-202ENST00000577396 CFAP70Q5T0N1 1121 aa28.91■■■□□ 2.22
SUPT4H1-202ENST00000577396 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
SUPT4H1-202ENST00000577396 NWD1Q149M9 1564 aa28.89■■■□□ 2.22
SUPT4H1-202ENST00000577396 LRRC7Q96NW7 1537 aa28.86■■■□□ 2.21
SUPT4H1-202ENST00000577396 TMEM132EQ6IEE7 984 aa28.85■■■□□ 2.21
SUPT4H1-202ENST00000577396 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
SUPT4H1-202ENST00000577396 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
SUPT4H1-202ENST00000577396 NKTRP30414 1462 aaKnown RBP28.83■■■□□ 2.21
SUPT4H1-202ENST00000577396 PROSER2Q86WR7 435 aaPredicted RBP28.83■■■□□ 2.21
SUPT4H1-202ENST00000577396 ASXL1Q8IXJ9 1541 aa28.82■■■□□ 2.2
SUPT4H1-202ENST00000577396 XRN1Q8IZH2 1706 aaKnown RBP28.81■■■□□ 2.2
SUPT4H1-202ENST00000577396 RBM33Q96EV2 1170 aaKnown RBP28.8■■■□□ 2.2
SUPT4H1-202ENST00000577396 LAMC1P11047 1609 aa28.79■■■□□ 2.2
SUPT4H1-202ENST00000577396 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
SUPT4H1-202ENST00000577396 TMEM94Q12767 1356 aa28.78■■■□□ 2.2
SUPT4H1-202ENST00000577396 LRPPRCP42704 1394 aaKnown RBP28.77■■■□□ 2.2
SUPT4H1-202ENST00000577396 TIMELESSQ9UNS1 1208 aa28.76■■■□□ 2.2
SUPT4H1-202ENST00000577396 ADGRB1O14514 1584 aa28.76■■■□□ 2.19
SUPT4H1-202ENST00000577396 ABCC11Q96J66 1382 aa28.76■■■□□ 2.19
SUPT4H1-202ENST00000577396 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
SUPT4H1-202ENST00000577396 STK26Q9P289 416 aa28.75■■■□□ 2.19
SUPT4H1-202ENST00000577396 YTHDC2Q9H6S0 1430 aaKnown RBP28.75■■■□□ 2.19
SUPT4H1-202ENST00000577396 XIRP1Q702N8 1843 aaKnown RBP28.74■■■□□ 2.19
SUPT4H1-202ENST00000577396 ROBO2Q9HCK4 1378 aa28.74■■■□□ 2.19
SUPT4H1-202ENST00000577396 NBPF1Q3BBV0 1214 aa28.73■■■□□ 2.19
SUPT4H1-202ENST00000577396 TECPR2O15040 1411 aa28.73■■■□□ 2.19
SUPT4H1-202ENST00000577396 PTCH1Q13635 1447 aa28.72■■■□□ 2.19
SUPT4H1-202ENST00000577396 NCOA3Q9Y6Q9 1424 aa28.72■■■□□ 2.19
SUPT4H1-202ENST00000577396 KIAA1210Q9ULL0 1709 aa28.71■■■□□ 2.19
SUPT4H1-202ENST00000577396 SIRT1Q96EB6 747 aa28.7■■■□□ 2.19
SUPT4H1-202ENST00000577396 WAPLQ7Z5K2 1190 aa28.65■■■□□ 2.18
SUPT4H1-202ENST00000577396 C19orf44Q9H6X5 657 aa28.64■■■□□ 2.18
SUPT4H1-202ENST00000577396 TRAK1Q9UPV9 953 aa28.64■■■□□ 2.18
SUPT4H1-202ENST00000577396 KNDC1Q76NI1 1749 aa28.64■■■□□ 2.17
SUPT4H1-202ENST00000577396 FAM135BQ49AJ0 1406 aa28.63■■■□□ 2.17
SUPT4H1-202ENST00000577396 TRPM1Q7Z4N2 1603 aa28.63■■■□□ 2.17
SUPT4H1-202ENST00000577396 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
SUPT4H1-202ENST00000577396 DLC1Q96QB1 1528 aa28.61■■■□□ 2.17
SUPT4H1-202ENST00000577396 MSH6P52701 1360 aa28.6■■■□□ 2.17
SUPT4H1-202ENST00000577396 UBAP1LF5GYI3 381 aa28.6■■■□□ 2.17
SUPT4H1-202ENST00000577396 C14orf37Q86TY3 774 aa28.6■■■□□ 2.17
SUPT4H1-202ENST00000577396 FBXO41Q8TF61 875 aa28.59■■■□□ 2.17
SUPT4H1-202ENST00000577396 TOM1O60784 492 aa28.58■■■□□ 2.17
SUPT4H1-202ENST00000577396 PRAM1Q96QH2 718 aa28.58■■■□□ 2.17
SUPT4H1-202ENST00000577396 GPRASP1Q5JY77 1395 aa28.57■■■□□ 2.16
SUPT4H1-202ENST00000577396 ADGRL3Q9HAR2 1447 aa28.57■■■□□ 2.16
SUPT4H1-202ENST00000577396 ROCK2O75116 1388 aaKnown RBP28.56■■■□□ 2.16
SUPT4H1-202ENST00000577396 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.54■■■□□ 2.16
SUPT4H1-202ENST00000577396 RALGAPBQ86X10 1494 aa28.54■■■□□ 2.16
SUPT4H1-202ENST00000577396 POGKQ9P215 609 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms