RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
SCO1-202ENST00000577335 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
SCO1-202ENST00000577335 ZNF326Q5BKZ1 582 aaKnown RBP28.82■■■□□ 2.2
SCO1-202ENST00000577335 PLEKHG1Q9ULL1 1385 aa28.82■■■□□ 2.2
SCO1-202ENST00000577335 ZNF335Q9H4Z2 1342 aaPredicted RBP28.8■■■□□ 2.2
SCO1-202ENST00000577335 RPGRIP1LQ68CZ1 1315 aa28.79■■■□□ 2.2
SCO1-202ENST00000577335 MYO5BQ9ULV0 1848 aa28.79■■■□□ 2.2
SCO1-202ENST00000577335 LTBP4Q8N2S1 1624 aa28.78■■■□□ 2.2
SCO1-202ENST00000577335 CERKQ8TCT0 537 aa28.77■■■□□ 2.2
SCO1-202ENST00000577335 KIF1BO60333 1816 aa28.77■■■□□ 2.2
SCO1-202ENST00000577335 ANKRD30BQ9BXX2 1392 aa28.76■■■□□ 2.2
SCO1-202ENST00000577335 BCANQ96GW7 911 aa28.74■■■□□ 2.19
SCO1-202ENST00000577335 SPATA31E1Q6ZUB1 1445 aa28.72■■■□□ 2.19
SCO1-202ENST00000577335 CPS1P31327 1500 aa28.71■■■□□ 2.19
SCO1-202ENST00000577335 VGFO15240 615 aaPredicted RBP28.71■■■□□ 2.19
SCO1-202ENST00000577335 SLC26A8Q96RN1 970 aa28.71■■■□□ 2.19
SCO1-202ENST00000577335 TBX22Q9Y458 520 aa28.71■■■□□ 2.19
SCO1-202ENST00000577335 NEXMIFQ5QGS0 1516 aa28.7■■■□□ 2.19
SCO1-202ENST00000577335 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
SCO1-202ENST00000577335 IQSEC2Q5JU85 1478 aa28.69■■■□□ 2.18
SCO1-202ENST00000577335 ADAMTS13Q76LX8 1427 aa28.65■■■□□ 2.18
SCO1-202ENST00000577335 DIP2AQ14689 1571 aa28.65■■■□□ 2.18
SCO1-202ENST00000577335 KCNA6P17658 529 aa28.64■■■□□ 2.18
SCO1-202ENST00000577335 PIK3R4Q99570 1358 aa28.63■■■□□ 2.17
SCO1-202ENST00000577335 RGL3Q3MIN7 710 aa28.63■■■□□ 2.17
SCO1-202ENST00000577335 SETBP1Q9Y6X0 1596 aa28.62■■■□□ 2.17
SCO1-202ENST00000577335 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
SCO1-202ENST00000577335 SENP3Q9H4L4 574 aaPredicted RBP28.57■■■□□ 2.16
SCO1-202ENST00000577335 PPLO60437 1756 aa28.55■■■□□ 2.16
SCO1-202ENST00000577335 STAC3Q96MF2 364 aa28.55■■■□□ 2.16
SCO1-202ENST00000577335 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
SCO1-202ENST00000577335 LRRC7Q96NW7 1537 aa28.53■■■□□ 2.16
SCO1-202ENST00000577335 NKTRP30414 1462 aaKnown RBP28.53■■■□□ 2.16
SCO1-202ENST00000577335 DHX57Q6P158 1386 aaKnown RBP28.53■■■□□ 2.16
SCO1-202ENST00000577335 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
SCO1-202ENST00000577335 STRCP1A6NGW2 1772 aa28.51■■■□□ 2.15
SCO1-202ENST00000577335 ADGRF5Q8IZF2 1346 aa28.5■■■□□ 2.15
SCO1-202ENST00000577335 MYOM2P54296 1465 aa28.49■■■□□ 2.15
SCO1-202ENST00000577335 IFT172Q9UG01 1749 aa28.48■■■□□ 2.15
SCO1-202ENST00000577335 PROSER2Q86WR7 435 aaPredicted RBP28.47■■■□□ 2.15
SCO1-202ENST00000577335 METP08581 1390 aa28.47■■■□□ 2.15
SCO1-202ENST00000577335 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
SCO1-202ENST00000577335 PCGF6Q9BYE7 350 aa28.46■■■□□ 2.15
SCO1-202ENST00000577335 AMOTL2Q9Y2J4 779 aa28.46■■■□□ 2.15
SCO1-202ENST00000577335 PIK3C2GO75747 1445 aa28.45■■■□□ 2.15
SCO1-202ENST00000577335 NRXN1Q9ULB1 1477 aa28.45■■■□□ 2.14
SCO1-202ENST00000577335 ALKQ9UM73 1620 aa28.44■■■□□ 2.14
SCO1-202ENST00000577335 TMEM94Q12767 1356 aa28.44■■■□□ 2.14
SCO1-202ENST00000577335 NCOA3Q9Y6Q9 1424 aa28.43■■■□□ 2.14
SCO1-202ENST00000577335 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
SCO1-202ENST00000577335 ILDR1Q86SU0 546 aaPredicted RBP28.42■■■□□ 2.14
SCO1-202ENST00000577335 DCAF11Q8TEB1 546 aa28.41■■■□□ 2.14
SCO1-202ENST00000577335 TOM1O60784 492 aa28.4■■■□□ 2.14
SCO1-202ENST00000577335 UBAP1LF5GYI3 381 aa28.39■■■□□ 2.14
SCO1-202ENST00000577335 C14orf93Q9H972 538 aaKnown RBP28.38■■■□□ 2.13
SCO1-202ENST00000577335 PRAG1Q86YV5 1406 aa28.37■■■□□ 2.13
SCO1-202ENST00000577335 SETD1AO15047 1707 aaKnown RBP28.36■■■□□ 2.13
SCO1-202ENST00000577335 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
SCO1-202ENST00000577335 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
SCO1-202ENST00000577335 SIN3AQ96ST3 1273 aa28.33■■■□□ 2.13
SCO1-202ENST00000577335 MSH6P52701 1360 aa28.32■■■□□ 2.12
SCO1-202ENST00000577335 PTCH1Q13635 1447 aa28.32■■■□□ 2.12
SCO1-202ENST00000577335 LAMC1P11047 1609 aa28.31■■■□□ 2.12
SCO1-202ENST00000577335 CFAP70Q5T0N1 1121 aa28.3■■■□□ 2.12
SCO1-202ENST00000577335 RBM33Q96EV2 1170 aaKnown RBP28.3■■■□□ 2.12
SCO1-202ENST00000577335 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
SCO1-202ENST00000577335 NEUROD1Q13562 356 aa28.29■■■□□ 2.12
SCO1-202ENST00000577335 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
SCO1-202ENST00000577335 ABCC11Q96J66 1382 aa28.28■■■□□ 2.12
SCO1-202ENST00000577335 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
SCO1-202ENST00000577335 C19orf44Q9H6X5 657 aa28.28■■■□□ 2.12
SCO1-202ENST00000577335 TECPR2O15040 1411 aa28.27■■■□□ 2.12
SCO1-202ENST00000577335 TMEM132EQ6IEE7 984 aa28.25■■■□□ 2.11
SCO1-202ENST00000577335 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
SCO1-202ENST00000577335 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
SCO1-202ENST00000577335 ASXL1Q8IXJ9 1541 aa28.24■■■□□ 2.11
SCO1-202ENST00000577335 SIRT1Q96EB6 747 aa28.24■■■□□ 2.11
SCO1-202ENST00000577335 YTHDC2Q9H6S0 1430 aaKnown RBP28.24■■■□□ 2.11
SCO1-202ENST00000577335 CLSPNQ9HAW4 1339 aa28.22■■■□□ 2.11
SCO1-202ENST00000577335 DCCP43146 1447 aa28.22■■■□□ 2.11
SCO1-202ENST00000577335 CADPS2Q86UW7 1296 aa28.22■■■□□ 2.11
SCO1-202ENST00000577335 STK26Q9P289 416 aa28.21■■■□□ 2.11
SCO1-202ENST00000577335 PIP4K2BP78356 416 aa28.2■■■□□ 2.1
SCO1-202ENST00000577335 ADGRL3Q9HAR2 1447 aa28.19■■■□□ 2.1
SCO1-202ENST00000577335 ATF3P18847 181 aa28.19■■■□□ 2.1
SCO1-202ENST00000577335 FAM135BQ49AJ0 1406 aa28.18■■■□□ 2.1
SCO1-202ENST00000577335 ADGRB1O14514 1584 aa28.18■■■□□ 2.1
SCO1-202ENST00000577335 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
SCO1-202ENST00000577335 SLAIN2Q9P270 581 aa28.16■■■□□ 2.1
SCO1-202ENST00000577335 KNDC1Q76NI1 1749 aa28.15■■■□□ 2.1
SCO1-202ENST00000577335 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
SCO1-202ENST00000577335 DLC1Q96QB1 1528 aa28.13■■■□□ 2.09
SCO1-202ENST00000577335 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
SCO1-202ENST00000577335 KIAA1210Q9ULL0 1709 aa28.12■■■□□ 2.09
SCO1-202ENST00000577335 WAPLQ7Z5K2 1190 aa28.1■■■□□ 2.09
SCO1-202ENST00000577335 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
SCO1-202ENST00000577335 TIMELESSQ9UNS1 1208 aa28.06■■■□□ 2.08
SCO1-202ENST00000577335 TRAK1Q9UPV9 953 aa28.06■■■□□ 2.08
SCO1-202ENST00000577335 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
SCO1-202ENST00000577335 POGKQ9P215 609 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms