RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 UNC13BO14795 1591 aa20.28■□□□□ 0.84
ATP2A3-215ENST00000576957 GCC2Q8IWJ2 1684 aa20.28■□□□□ 0.84
ATP2A3-215ENST00000576957 NKTRP30414 1462 aaKnown RBP20.27■□□□□ 0.84
ATP2A3-215ENST00000576957 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
ATP2A3-215ENST00000576957 ZFYVE9O95405 1425 aa20.27■□□□□ 0.83
ATP2A3-215ENST00000576957 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
ATP2A3-215ENST00000576957 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
ATP2A3-215ENST00000576957 BCANQ96GW7 911 aa20.26■□□□□ 0.83
ATP2A3-215ENST00000576957 TMEM131LA2VDJ0 1609 aa20.24■□□□□ 0.83
ATP2A3-215ENST00000576957 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
ATP2A3-215ENST00000576957 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
ATP2A3-215ENST00000576957 MYO5BQ9ULV0 1848 aa20.23■□□□□ 0.83
ATP2A3-215ENST00000576957 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
ATP2A3-215ENST00000576957 IQGAP3Q86VI3 1631 aa20.2■□□□□ 0.82
ATP2A3-215ENST00000576957 E9PCH4 1651 aa20.2■□□□□ 0.82
ATP2A3-215ENST00000576957 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
ATP2A3-215ENST00000576957 MSH6P52701 1360 aa20.2■□□□□ 0.82
ATP2A3-215ENST00000576957 CHD2O14647 1828 aaKnown RBP20.19■□□□□ 0.82
ATP2A3-215ENST00000576957 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
ATP2A3-215ENST00000576957 ROBO1Q9Y6N7 1651 aa20.17■□□□□ 0.82
ATP2A3-215ENST00000576957 CHGAP10645 457 aaKnown RBP20.17■□□□□ 0.82
ATP2A3-215ENST00000576957 NUP155O75694 1391 aa20.17■□□□□ 0.82
ATP2A3-215ENST00000576957 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
ATP2A3-215ENST00000576957 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
ATP2A3-215ENST00000576957 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
ATP2A3-215ENST00000576957 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
ATP2A3-215ENST00000576957 ITGAEP38570 1179 aa20.13■□□□□ 0.81
ATP2A3-215ENST00000576957 ADAMTS13Q76LX8 1427 aa20.12■□□□□ 0.81
ATP2A3-215ENST00000576957 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
ATP2A3-215ENST00000576957 NUTM2DQ5VT03 806 aaPredicted RBP20.09■□□□□ 0.81
ATP2A3-215ENST00000576957 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
ATP2A3-215ENST00000576957 TRPM2O94759 1503 aa20.07■□□□□ 0.8
ATP2A3-215ENST00000576957 PHLPP1O60346 1717 aa20.06■□□□□ 0.8
ATP2A3-215ENST00000576957 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
ATP2A3-215ENST00000576957 PCGF6Q9BYE7 350 aa20.06■□□□□ 0.8
ATP2A3-215ENST00000576957 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
ATP2A3-215ENST00000576957 PPARGC1BQ86YN6 1023 aaKnown RBP20.05■□□□□ 0.8
ATP2A3-215ENST00000576957 JCADQ9P266 1359 aa20.05■□□□□ 0.8
ATP2A3-215ENST00000576957 SPHKAPQ2M3C7 1700 aa20.04■□□□□ 0.8
ATP2A3-215ENST00000576957 ATF3P18847 181 aa20.03■□□□□ 0.8
ATP2A3-215ENST00000576957 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
ATP2A3-215ENST00000576957 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
ATP2A3-215ENST00000576957 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
ATP2A3-215ENST00000576957 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
ATP2A3-215ENST00000576957 SETBP1Q9Y6X0 1596 aa20■□□□□ 0.79
ATP2A3-215ENST00000576957 POTEAQ6S8J7 498 aa20■□□□□ 0.79
ATP2A3-215ENST00000576957 COL16A1Q07092 1604 aaPredicted RBP19.99■□□□□ 0.79
ATP2A3-215ENST00000576957 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
ATP2A3-215ENST00000576957 DCCP43146 1447 aa19.98■□□□□ 0.79
ATP2A3-215ENST00000576957 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
ATP2A3-215ENST00000576957 AHDC1Q5TGY3 1603 aaPredicted RBP19.97■□□□□ 0.79
ATP2A3-215ENST00000576957 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
ATP2A3-215ENST00000576957 NAIPQ13075 1403 aa19.96■□□□□ 0.79
ATP2A3-215ENST00000576957 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
ATP2A3-215ENST00000576957 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
ATP2A3-215ENST00000576957 BRINP3Q76B58 766 aa19.93■□□□□ 0.78
ATP2A3-215ENST00000576957 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
ATP2A3-215ENST00000576957 METP08581 1390 aa19.93■□□□□ 0.78
ATP2A3-215ENST00000576957 NEXMIFQ5QGS0 1516 aa19.92■□□□□ 0.78
ATP2A3-215ENST00000576957 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
ATP2A3-215ENST00000576957 KIF1BO60333 1816 aa19.9■□□□□ 0.78
ATP2A3-215ENST00000576957 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
ATP2A3-215ENST00000576957 LRP6O75581 1613 aa19.88■□□□□ 0.77
ATP2A3-215ENST00000576957 MST1RQ04912 1400 aa19.88■□□□□ 0.77
ATP2A3-215ENST00000576957 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
ATP2A3-215ENST00000576957 MEX3CQ5U5Q3 659 aaKnown RBP19.87■□□□□ 0.77
ATP2A3-215ENST00000576957 ZNF772Q68DY9 489 aaPredicted RBP19.87■□□□□ 0.77
ATP2A3-215ENST00000576957 TRIM52Q96A61 297 aa19.87■□□□□ 0.77
ATP2A3-215ENST00000576957 ASXL1Q8IXJ9 1541 aa19.86■□□□□ 0.77
ATP2A3-215ENST00000576957 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
ATP2A3-215ENST00000576957 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
ATP2A3-215ENST00000576957 RPGRIP1LQ68CZ1 1315 aa19.85■□□□□ 0.77
ATP2A3-215ENST00000576957 LRRC59Q96AG4 307 aaKnown RBP19.83■□□□□ 0.77
ATP2A3-215ENST00000576957 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.77
ATP2A3-215ENST00000576957 NHSL1Q5SYE7 1610 aa19.83■□□□□ 0.76
ATP2A3-215ENST00000576957 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
ATP2A3-215ENST00000576957 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
ATP2A3-215ENST00000576957 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
ATP2A3-215ENST00000576957 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
ATP2A3-215ENST00000576957 SETD1AO15047 1707 aaKnown RBP19.79■□□□□ 0.76
ATP2A3-215ENST00000576957 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
ATP2A3-215ENST00000576957 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
ATP2A3-215ENST00000576957 NUTM2AQ8IVF1 878 aaPredicted RBP19.78■□□□□ 0.76
ATP2A3-215ENST00000576957 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
ATP2A3-215ENST00000576957 ROBO2Q9HCK4 1378 aa19.76■□□□□ 0.75
ATP2A3-215ENST00000576957 PPLO60437 1756 aa19.75■□□□□ 0.75
ATP2A3-215ENST00000576957 RXRBP28702 533 aa19.75■□□□□ 0.75
ATP2A3-215ENST00000576957 LAMC1P11047 1609 aa19.73■□□□□ 0.75
ATP2A3-215ENST00000576957 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
ATP2A3-215ENST00000576957 DDX17Q92841 729 aaKnown RBP19.73■□□□□ 0.75
ATP2A3-215ENST00000576957 CDK12Q9NYV4 1490 aaPredicted RBP19.72■□□□□ 0.75
ATP2A3-215ENST00000576957 AFF2P51816 1311 aa19.72■□□□□ 0.75
ATP2A3-215ENST00000576957 CCDC144AA2RUR9 1427 aa19.7■□□□□ 0.74
ATP2A3-215ENST00000576957 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
ATP2A3-215ENST00000576957 FOXD1Q16676 465 aa19.69■□□□□ 0.74
ATP2A3-215ENST00000576957 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
ATP2A3-215ENST00000576957 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATP2A3-215ENST00000576957 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
ATP2A3-215ENST00000576957 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
ATP2A3-215ENST00000576957 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms