RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SETD1AO15047 1707 aaKnown RBP15.83■□□□□ 0.13
NPLOC4-220ENST00000576940 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
NPLOC4-220ENST00000576940 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-220ENST00000576940 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-220ENST00000576940 NKTRP30414 1462 aaKnown RBP15.83■□□□□ 0.12
NPLOC4-220ENST00000576940 C14orf37Q86TY3 774 aa15.82■□□□□ 0.12
NPLOC4-220ENST00000576940 ADGRB3O60242 1522 aa15.82■□□□□ 0.12
NPLOC4-220ENST00000576940 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
NPLOC4-220ENST00000576940 CHGAP10645 457 aaKnown RBP15.81■□□□□ 0.12
NPLOC4-220ENST00000576940 HDGFP51858 240 aaKnown RBP15.81■□□□□ 0.12
NPLOC4-220ENST00000576940 FGD6Q6ZV73 1430 aa15.81■□□□□ 0.12
NPLOC4-220ENST00000576940 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
NPLOC4-220ENST00000576940 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
NPLOC4-220ENST00000576940 PLEKHG1Q9ULL1 1385 aa15.8■□□□□ 0.12
NPLOC4-220ENST00000576940 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
NPLOC4-220ENST00000576940 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPLOC4-220ENST00000576940 CHD2O14647 1828 aaKnown RBP15.8■□□□□ 0.12
NPLOC4-220ENST00000576940 ZFYVE9O95405 1425 aa15.79■□□□□ 0.12
NPLOC4-220ENST00000576940 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
NPLOC4-220ENST00000576940 ZNF772Q68DY9 489 aaPredicted RBP15.78■□□□□ 0.12
NPLOC4-220ENST00000576940 LRP6O75581 1613 aa15.78■□□□□ 0.12
NPLOC4-220ENST00000576940 SPATA31A6Q5VVP1 1343 aa15.77■□□□□ 0.12
NPLOC4-220ENST00000576940 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-220ENST00000576940 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.12
NPLOC4-220ENST00000576940 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.11
NPLOC4-220ENST00000576940 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
NPLOC4-220ENST00000576940 ATF3P18847 181 aa15.76■□□□□ 0.11
NPLOC4-220ENST00000576940 CADPS2Q86UW7 1296 aa15.76■□□□□ 0.11
NPLOC4-220ENST00000576940 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
NPLOC4-220ENST00000576940 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
NPLOC4-220ENST00000576940 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
NPLOC4-220ENST00000576940 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
NPLOC4-220ENST00000576940 RXRBP28702 533 aa15.74■□□□□ 0.11
NPLOC4-220ENST00000576940 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
NPLOC4-220ENST00000576940 ANKRD50Q9ULJ7 1429 aa15.74■□□□□ 0.11
NPLOC4-220ENST00000576940 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
NPLOC4-220ENST00000576940 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-220ENST00000576940 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
NPLOC4-220ENST00000576940 ADAMTS13Q76LX8 1427 aa15.73■□□□□ 0.11
NPLOC4-220ENST00000576940 BRINP3Q76B58 766 aa15.72■□□□□ 0.11
NPLOC4-220ENST00000576940 GCC2Q8IWJ2 1684 aa15.72■□□□□ 0.11
NPLOC4-220ENST00000576940 ADGRL2O95490 1459 aa15.71■□□□□ 0.11
NPLOC4-220ENST00000576940 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.71■□□□□ 0.1
NPLOC4-220ENST00000576940 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
NPLOC4-220ENST00000576940 AHDC1Q5TGY3 1603 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-220ENST00000576940 PIK3R4Q99570 1358 aa15.67■□□□□ 0.1
NPLOC4-220ENST00000576940 AFF2P51816 1311 aa15.67■□□□□ 0.1
NPLOC4-220ENST00000576940 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
NPLOC4-220ENST00000576940 SHPRHQ149N8 1683 aa15.66■□□□□ 0.1
NPLOC4-220ENST00000576940 QTRT2Q9H974 415 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-220ENST00000576940 DIP2AQ14689 1571 aa15.63■□□□□ 0.09
NPLOC4-220ENST00000576940 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
NPLOC4-220ENST00000576940 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
NPLOC4-220ENST00000576940 E9PCH4 1651 aa15.63■□□□□ 0.09
NPLOC4-220ENST00000576940 TRPM2O94759 1503 aa15.61■□□□□ 0.09
NPLOC4-220ENST00000576940 NUP155O75694 1391 aa15.61■□□□□ 0.09
NPLOC4-220ENST00000576940 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
NPLOC4-220ENST00000576940 RBM6P78332 1123 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-220ENST00000576940 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-220ENST00000576940 MST1RQ04912 1400 aa15.6■□□□□ 0.09
NPLOC4-220ENST00000576940 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
NPLOC4-220ENST00000576940 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
NPLOC4-220ENST00000576940 UNC13BO14795 1591 aa15.59■□□□□ 0.09
NPLOC4-220ENST00000576940 ITGAEP38570 1179 aa15.59■□□□□ 0.09
NPLOC4-220ENST00000576940 METP08581 1390 aa15.59■□□□□ 0.09
NPLOC4-220ENST00000576940 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
NPLOC4-220ENST00000576940 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
NPLOC4-220ENST00000576940 DCCP43146 1447 aa15.57■□□□□ 0.08
NPLOC4-220ENST00000576940 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
NPLOC4-220ENST00000576940 PNPLA6Q8IY17 1366 aa15.56■□□□□ 0.08
NPLOC4-220ENST00000576940 RGS12O14924 1447 aa15.56■□□□□ 0.08
NPLOC4-220ENST00000576940 NRXN3Q9Y4C0 1643 aa15.55■□□□□ 0.08
NPLOC4-220ENST00000576940 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
NPLOC4-220ENST00000576940 IQGAP3Q86VI3 1631 aa15.54■□□□□ 0.08
NPLOC4-220ENST00000576940 ROCK1Q13464 1354 aa15.54■□□□□ 0.08
NPLOC4-220ENST00000576940 ORAI2Q96SN7 254 aa15.53■□□□□ 0.08
NPLOC4-220ENST00000576940 XRN1Q8IZH2 1706 aaKnown RBP15.53■□□□□ 0.08
NPLOC4-220ENST00000576940 USP21Q9UK80 565 aa15.52■□□□□ 0.08
NPLOC4-220ENST00000576940 SETBP1Q9Y6X0 1596 aa15.51■□□□□ 0.07
NPLOC4-220ENST00000576940 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
NPLOC4-220ENST00000576940 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
NPLOC4-220ENST00000576940 PPARGC1BQ86YN6 1023 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-220ENST00000576940 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-220ENST00000576940 TRPC5Q9UL62 973 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-220ENST00000576940 FNBP4Q8N3X1 1017 aaPredicted RBP15.47■□□□□ 0.07
NPLOC4-220ENST00000576940 ATAD2Q6PL18 1390 aa15.46■□□□□ 0.07
NPLOC4-220ENST00000576940 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
NPLOC4-220ENST00000576940 ROBO2Q9HCK4 1378 aa15.45■□□□□ 0.06
NPLOC4-220ENST00000576940 SPHKAPQ2M3C7 1700 aa15.45■□□□□ 0.06
NPLOC4-220ENST00000576940 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
NPLOC4-220ENST00000576940 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
NPLOC4-220ENST00000576940 VGFO15240 615 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-220ENST00000576940 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-220ENST00000576940 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
NPLOC4-220ENST00000576940 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
NPLOC4-220ENST00000576940 ATRNO75882 1429 aa15.4■□□□□ 0.06
NPLOC4-220ENST00000576940 PTCH1Q13635 1447 aa15.4■□□□□ 0.06
NPLOC4-220ENST00000576940 FOXO3O43524 673 aa15.39■□□□□ 0.05
NPLOC4-220ENST00000576940 LAMC1P11047 1609 aa15.39■□□□□ 0.05
NPLOC4-220ENST00000576940 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms