RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
NDE1-211ENST00000576502 ZFYVE9O95405 1425 aa20.67■□□□□ 0.9
NDE1-211ENST00000576502 TOM1O60784 492 aa20.66■□□□□ 0.9
NDE1-211ENST00000576502 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
NDE1-211ENST00000576502 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
NDE1-211ENST00000576502 TRPM2O94759 1503 aa20.64■□□□□ 0.9
NDE1-211ENST00000576502 STRCP1A6NGW2 1772 aa20.62■□□□□ 0.89
NDE1-211ENST00000576502 SLC26A8Q96RN1 970 aa20.61■□□□□ 0.89
NDE1-211ENST00000576502 KIF1BO60333 1816 aa20.61■□□□□ 0.89
NDE1-211ENST00000576502 LRRC7Q96NW7 1537 aa20.61■□□□□ 0.89
NDE1-211ENST00000576502 KCNA6P17658 529 aa20.6■□□□□ 0.89
NDE1-211ENST00000576502 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
NDE1-211ENST00000576502 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
NDE1-211ENST00000576502 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.88
NDE1-211ENST00000576502 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
NDE1-211ENST00000576502 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
NDE1-211ENST00000576502 CLTCL1P53675 1640 aa20.57■□□□□ 0.88
NDE1-211ENST00000576502 TBX22Q9Y458 520 aa20.56■□□□□ 0.88
NDE1-211ENST00000576502 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
NDE1-211ENST00000576502 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
NDE1-211ENST00000576502 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
NDE1-211ENST00000576502 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
NDE1-211ENST00000576502 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
NDE1-211ENST00000576502 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
NDE1-211ENST00000576502 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
NDE1-211ENST00000576502 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
NDE1-211ENST00000576502 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
NDE1-211ENST00000576502 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
NDE1-211ENST00000576502 RPGRIP1LQ68CZ1 1315 aa20.5■□□□□ 0.87
NDE1-211ENST00000576502 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
NDE1-211ENST00000576502 SETBP1Q9Y6X0 1596 aa20.48■□□□□ 0.87
NDE1-211ENST00000576502 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
NDE1-211ENST00000576502 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
NDE1-211ENST00000576502 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
NDE1-211ENST00000576502 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
NDE1-211ENST00000576502 MSH6P52701 1360 aa20.46■□□□□ 0.87
NDE1-211ENST00000576502 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
NDE1-211ENST00000576502 FOXD1Q16676 465 aa20.44■□□□□ 0.86
NDE1-211ENST00000576502 HRCP23327 699 aa20.42■□□□□ 0.86
NDE1-211ENST00000576502 C14orf37Q86TY3 774 aa20.42■□□□□ 0.86
NDE1-211ENST00000576502 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
NDE1-211ENST00000576502 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
NDE1-211ENST00000576502 PPLO60437 1756 aa20.4■□□□□ 0.86
NDE1-211ENST00000576502 HSPA1LP34931 641 aa20.4■□□□□ 0.86
NDE1-211ENST00000576502 AMOTL2Q9Y2J4 779 aa20.4■□□□□ 0.86
NDE1-211ENST00000576502 ANKRD30BQ9BXX2 1392 aa20.37■□□□□ 0.85
NDE1-211ENST00000576502 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
NDE1-211ENST00000576502 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
NDE1-211ENST00000576502 XRN1Q8IZH2 1706 aaKnown RBP20.36■□□□□ 0.85
NDE1-211ENST00000576502 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
NDE1-211ENST00000576502 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
NDE1-211ENST00000576502 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
NDE1-211ENST00000576502 C19orf44Q9H6X5 657 aa20.34■□□□□ 0.85
NDE1-211ENST00000576502 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
NDE1-211ENST00000576502 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
NDE1-211ENST00000576502 ATF3P18847 181 aa20.33■□□□□ 0.85
NDE1-211ENST00000576502 METP08581 1390 aa20.33■□□□□ 0.84
NDE1-211ENST00000576502 SLAIN2Q9P270 581 aa20.31■□□□□ 0.84
NDE1-211ENST00000576502 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
NDE1-211ENST00000576502 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
NDE1-211ENST00000576502 DCCP43146 1447 aa20.29■□□□□ 0.84
NDE1-211ENST00000576502 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
NDE1-211ENST00000576502 SETD1AO15047 1707 aaKnown RBP20.28■□□□□ 0.84
NDE1-211ENST00000576502 PTCH1Q13635 1447 aa20.27■□□□□ 0.84
NDE1-211ENST00000576502 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
NDE1-211ENST00000576502 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
NDE1-211ENST00000576502 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
NDE1-211ENST00000576502 MYOM2P54296 1465 aa20.23■□□□□ 0.83
NDE1-211ENST00000576502 PIK3C2GO75747 1445 aa20.22■□□□□ 0.83
NDE1-211ENST00000576502 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
NDE1-211ENST00000576502 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
NDE1-211ENST00000576502 LAMC1P11047 1609 aa20.2■□□□□ 0.82
NDE1-211ENST00000576502 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
NDE1-211ENST00000576502 NALCNQ8IZF0 1738 aa20.18■□□□□ 0.82
NDE1-211ENST00000576502 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
NDE1-211ENST00000576502 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
NDE1-211ENST00000576502 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
NDE1-211ENST00000576502 NRXN1Q9ULB1 1477 aa20.17■□□□□ 0.82
NDE1-211ENST00000576502 TECPR2O15040 1411 aa20.16■□□□□ 0.82
NDE1-211ENST00000576502 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
NDE1-211ENST00000576502 C14orf93Q9H972 538 aaKnown RBP20.15■□□□□ 0.82
NDE1-211ENST00000576502 MST1RQ04912 1400 aa20.15■□□□□ 0.82
NDE1-211ENST00000576502 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
NDE1-211ENST00000576502 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
NDE1-211ENST00000576502 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
NDE1-211ENST00000576502 STK26Q9P289 416 aa20.14■□□□□ 0.81
NDE1-211ENST00000576502 JCADQ9P266 1359 aa20.13■□□□□ 0.81
NDE1-211ENST00000576502 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
NDE1-211ENST00000576502 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
NDE1-211ENST00000576502 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
NDE1-211ENST00000576502 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
NDE1-211ENST00000576502 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
NDE1-211ENST00000576502 COL16A1Q07092 1604 aaPredicted RBP20.1■□□□□ 0.81
NDE1-211ENST00000576502 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
NDE1-211ENST00000576502 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
NDE1-211ENST00000576502 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
NDE1-211ENST00000576502 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
NDE1-211ENST00000576502 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
NDE1-211ENST00000576502 NHSL1Q5SYE7 1610 aa20.06■□□□□ 0.8
NDE1-211ENST00000576502 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms