RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 BCAMP50895 628 aa11.08□□□□□ -0.64
CDC27-219ENST00000576484 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
CDC27-219ENST00000576484 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
CDC27-219ENST00000576484 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
CDC27-219ENST00000576484 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
CDC27-219ENST00000576484 RNF40O75150 1001 aa11.06□□□□□ -0.64
CDC27-219ENST00000576484 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
CDC27-219ENST00000576484 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
CDC27-219ENST00000576484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.05□□□□□ -0.64
CDC27-219ENST00000576484 THSD4Q6ZMP0 1018 aa11.05□□□□□ -0.64
CDC27-219ENST00000576484 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
CDC27-219ENST00000576484 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
CDC27-219ENST00000576484 KDM4CQ9H3R0 1056 aa11.05□□□□□ -0.64
CDC27-219ENST00000576484 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
CDC27-219ENST00000576484 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
CDC27-219ENST00000576484 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
CDC27-219ENST00000576484 DNAJB2P25686 324 aa11.03□□□□□ -0.64
CDC27-219ENST00000576484 CLCN1P35523 988 aa11.03□□□□□ -0.64
CDC27-219ENST00000576484 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
CDC27-219ENST00000576484 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
CDC27-219ENST00000576484 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
CDC27-219ENST00000576484 TMEM134Q9H6X4 195 aa11.01□□□□□ -0.65
CDC27-219ENST00000576484 HPS5Q9UPZ3 1129 aa11□□□□□ -0.65
CDC27-219ENST00000576484 MS4A1P11836 297 aa10.99□□□□□ -0.65
CDC27-219ENST00000576484 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
CDC27-219ENST00000576484 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
CDC27-219ENST00000576484 PPP4CP60510 307 aa10.97□□□□□ -0.65
CDC27-219ENST00000576484 WBP1LQ9NX94 342 aa10.97□□□□□ -0.65
CDC27-219ENST00000576484 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
CDC27-219ENST00000576484 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
CDC27-219ENST00000576484 SSTR3P32745 418 aaPredicted RBP10.95□□□□□ -0.66
CDC27-219ENST00000576484 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
CDC27-219ENST00000576484 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
CDC27-219ENST00000576484 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
CDC27-219ENST00000576484 PLEKHG3A1L390 1219 aa10.91□□□□□ -0.66
CDC27-219ENST00000576484 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
CDC27-219ENST00000576484 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
CDC27-219ENST00000576484 CD46P15529 392 aa10.89□□□□□ -0.67
CDC27-219ENST00000576484 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
CDC27-219ENST00000576484 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
CDC27-219ENST00000576484 TMEM132AQ24JP5 1023 aa10.88□□□□□ -0.67
CDC27-219ENST00000576484 SLC10A3P09131 477 aa10.87□□□□□ -0.67
CDC27-219ENST00000576484 RDH13Q8NBN7 331 aa10.87□□□□□ -0.67
CDC27-219ENST00000576484 APLP1P51693 650 aa10.84□□□□□ -0.67
CDC27-219ENST00000576484 RSPH4AQ5TD94 716 aa10.84□□□□□ -0.67
CDC27-219ENST00000576484 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
CDC27-219ENST00000576484 NECTIN2Q92692 538 aa10.83□□□□□ -0.68
CDC27-219ENST00000576484 CFHP08603 1231 aa10.82□□□□□ -0.68
CDC27-219ENST00000576484 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
CDC27-219ENST00000576484 GCGRP47871 477 aa10.8□□□□□ -0.68
CDC27-219ENST00000576484 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
CDC27-219ENST00000576484 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
CDC27-219ENST00000576484 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
CDC27-219ENST00000576484 COPS2P61201 443 aa10.78□□□□□ -0.68
CDC27-219ENST00000576484 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
CDC27-219ENST00000576484 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
CDC27-219ENST00000576484 KDM4AO75164 1064 aa10.76□□□□□ -0.69
CDC27-219ENST00000576484 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
CDC27-219ENST00000576484 MTRQ99707 1265 aa10.76□□□□□ -0.69
CDC27-219ENST00000576484 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
CDC27-219ENST00000576484 PCDHB3Q9Y5E6 796 aa10.76□□□□□ -0.69
CDC27-219ENST00000576484 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
CDC27-219ENST00000576484 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
CDC27-219ENST00000576484 MOXD2PA6NHM9 499 aa10.73□□□□□ -0.69
CDC27-219ENST00000576484 HOXA2O43364 376 aa10.73□□□□□ -0.69
CDC27-219ENST00000576484 ACTN4O43707 911 aaKnown RBP10.73□□□□□ -0.69
CDC27-219ENST00000576484 KCNC4Q03721 635 aa10.73□□□□□ -0.69
CDC27-219ENST00000576484 FUT2Q10981 343 aa10.73□□□□□ -0.69
CDC27-219ENST00000576484 DIXDC1Q155Q3 683 aa10.73□□□□□ -0.69
CDC27-219ENST00000576484 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
CDC27-219ENST00000576484 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
CDC27-219ENST00000576484 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
CDC27-219ENST00000576484 BLOC1S3Q6QNY0 202 aa10.72□□□□□ -0.69
CDC27-219ENST00000576484 ZNF516Q92618 1163 aa10.72□□□□□ -0.69
CDC27-219ENST00000576484 HLA-CQ95604 372 aa10.72□□□□□ -0.69
CDC27-219ENST00000576484 POLR3EQ9NVU0 708 aa10.72□□□□□ -0.69
CDC27-219ENST00000576484 NDUFV2P19404 249 aa10.71□□□□□ -0.69
CDC27-219ENST00000576484 CLK2P49760 499 aaKnown RBP10.71□□□□□ -0.69
CDC27-219ENST00000576484 USP46P62068 366 aa10.71□□□□□ -0.69
CDC27-219ENST00000576484 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
CDC27-219ENST00000576484 LIMD1Q9UGP4 676 aa10.71□□□□□ -0.69
CDC27-219ENST00000576484 RSBN1LQ6PCB5 846 aaPredicted RBP10.7□□□□□ -0.7
CDC27-219ENST00000576484 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
CDC27-219ENST00000576484 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
CDC27-219ENST00000576484 RIC3Q7Z5B4 369 aa10.69□□□□□ -0.7
CDC27-219ENST00000576484 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
CDC27-219ENST00000576484 PCMTD1Q96MG8 357 aaPredicted RBP10.69□□□□□ -0.7
CDC27-219ENST00000576484 SPTLC1O15269 473 aa10.68□□□□□ -0.7
CDC27-219ENST00000576484 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
CDC27-219ENST00000576484 NKX2-3Q8TAU0 364 aa10.67□□□□□ -0.7
CDC27-219ENST00000576484 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDC27-219ENST00000576484 ZPR1O75312 459 aa10.65□□□□□ -0.7
CDC27-219ENST00000576484 NR1I2O75469 434 aa10.65□□□□□ -0.7
CDC27-219ENST00000576484 FDX1P10109 184 aa10.65□□□□□ -0.7
CDC27-219ENST00000576484 MORN1Q5T089 497 aa10.65□□□□□ -0.7
CDC27-219ENST00000576484 PCDHGC3Q9UN70 934 aa10.65□□□□□ -0.7
CDC27-219ENST00000576484 GJA5P36382 358 aa10.64□□□□□ -0.71
CDC27-219ENST00000576484 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
CDC27-219ENST00000576484 GRIPAP1Q4V328 841 aa10.64□□□□□ -0.71
CDC27-219ENST00000576484 FBXO31Q5XUX0 539 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms