RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 IFT172Q9UG01 1749 aa18.99■□□□□ 0.63
RAB40B-211ENST00000576359 ABCA6Q8N139 1617 aa18.98■□□□□ 0.63
RAB40B-211ENST00000576359 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
RAB40B-211ENST00000576359 MYOM2P54296 1465 aa18.98■□□□□ 0.63
RAB40B-211ENST00000576359 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
RAB40B-211ENST00000576359 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
RAB40B-211ENST00000576359 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
RAB40B-211ENST00000576359 NPATQ14207 1427 aa18.93■□□□□ 0.62
RAB40B-211ENST00000576359 ADGRB3O60242 1522 aa18.93■□□□□ 0.62
RAB40B-211ENST00000576359 MYOM1P52179 1685 aa18.93■□□□□ 0.62
RAB40B-211ENST00000576359 SYNMO15061 1565 aa18.93■□□□□ 0.62
RAB40B-211ENST00000576359 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
RAB40B-211ENST00000576359 NEO1Q92859 1461 aa18.92■□□□□ 0.62
RAB40B-211ENST00000576359 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
RAB40B-211ENST00000576359 RNF123Q5XPI4 1314 aa18.91■□□□□ 0.62
RAB40B-211ENST00000576359 GGT6Q6P531 493 aa18.91■□□□□ 0.62
RAB40B-211ENST00000576359 RAPGEF3O95398 923 aa18.9■□□□□ 0.62
RAB40B-211ENST00000576359 B4GALNT3Q6L9W6 998 aa18.9■□□□□ 0.62
RAB40B-211ENST00000576359 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
RAB40B-211ENST00000576359 ABCC3O15438 1527 aa18.9■□□□□ 0.62
RAB40B-211ENST00000576359 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.62
RAB40B-211ENST00000576359 DIP2CQ9Y2E4 1556 aa18.88■□□□□ 0.61
RAB40B-211ENST00000576359 NOS1P29475 1434 aa18.88■□□□□ 0.61
RAB40B-211ENST00000576359 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
RAB40B-211ENST00000576359 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
RAB40B-211ENST00000576359 RICTORQ6R327 1708 aa18.86■□□□□ 0.61
RAB40B-211ENST00000576359 PPLO60437 1756 aa18.86■□□□□ 0.61
RAB40B-211ENST00000576359 AMER1Q5JTC6 1135 aaPredicted RBP18.86■□□□□ 0.61
RAB40B-211ENST00000576359 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
RAB40B-211ENST00000576359 CAMSAP1Q5T5Y3 1602 aa18.86■□□□□ 0.61
RAB40B-211ENST00000576359 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
RAB40B-211ENST00000576359 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
RAB40B-211ENST00000576359 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
RAB40B-211ENST00000576359 MYO3AQ8NEV4 1616 aa18.84■□□□□ 0.61
RAB40B-211ENST00000576359 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.61
RAB40B-211ENST00000576359 ZMYM4Q5VZL5 1548 aa18.83■□□□□ 0.61
RAB40B-211ENST00000576359 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.6
RAB40B-211ENST00000576359 SALL2Q9Y467 1007 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-211ENST00000576359 SETBP1Q9Y6X0 1596 aa18.82■□□□□ 0.6
RAB40B-211ENST00000576359 INSRP06213 1382 aa18.82■□□□□ 0.6
RAB40B-211ENST00000576359 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
RAB40B-211ENST00000576359 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
RAB40B-211ENST00000576359 PIK3C2BO00750 1634 aa18.8■□□□□ 0.6
RAB40B-211ENST00000576359 YEATS2Q9ULM3 1422 aa18.79■□□□□ 0.6
RAB40B-211ENST00000576359 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
RAB40B-211ENST00000576359 ADGRB1O14514 1584 aa18.79■□□□□ 0.6
RAB40B-211ENST00000576359 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.6
RAB40B-211ENST00000576359 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.6
RAB40B-211ENST00000576359 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
RAB40B-211ENST00000576359 GLI2P10070 1586 aa18.76■□□□□ 0.59
RAB40B-211ENST00000576359 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
RAB40B-211ENST00000576359 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
RAB40B-211ENST00000576359 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
RAB40B-211ENST00000576359 CDCA7LQ96GN5 454 aa18.75■□□□□ 0.59
RAB40B-211ENST00000576359 ADAMTS8Q9UP79 889 aa18.75■□□□□ 0.59
RAB40B-211ENST00000576359 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
RAB40B-211ENST00000576359 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
RAB40B-211ENST00000576359 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
RAB40B-211ENST00000576359 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
RAB40B-211ENST00000576359 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
RAB40B-211ENST00000576359 CARD14Q9BXL6 1004 aa18.73■□□□□ 0.59
RAB40B-211ENST00000576359 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
RAB40B-211ENST00000576359 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
RAB40B-211ENST00000576359 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 TMEM132EQ6IEE7 984 aa18.72■□□□□ 0.59
RAB40B-211ENST00000576359 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
RAB40B-211ENST00000576359 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
RAB40B-211ENST00000576359 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
RAB40B-211ENST00000576359 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
RAB40B-211ENST00000576359 MSH5O43196 834 aa18.68■□□□□ 0.58
RAB40B-211ENST00000576359 IDI1Q13907 227 aa18.67■□□□□ 0.58
RAB40B-211ENST00000576359 WDR43Q15061 677 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB40B-211ENST00000576359 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
RAB40B-211ENST00000576359 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
RAB40B-211ENST00000576359 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
RAB40B-211ENST00000576359 ARHGEF28Q8N1W1 1705 aaKnown RBP18.66■□□□□ 0.58
RAB40B-211ENST00000576359 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
RAB40B-211ENST00000576359 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
RAB40B-211ENST00000576359 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
RAB40B-211ENST00000576359 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
RAB40B-211ENST00000576359 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
RAB40B-211ENST00000576359 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
RAB40B-211ENST00000576359 NSD3Q9BZ95 1437 aa18.62■□□□□ 0.57
RAB40B-211ENST00000576359 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
RAB40B-211ENST00000576359 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
RAB40B-211ENST00000576359 SLC52A1Q9NWF4 448 aa18.61■□□□□ 0.57
RAB40B-211ENST00000576359 ZFYVE9O95405 1425 aa18.61■□□□□ 0.57
RAB40B-211ENST00000576359 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
RAB40B-211ENST00000576359 FBXO31Q5XUX0 539 aaPredicted RBP18.58■□□□□ 0.56
RAB40B-211ENST00000576359 USP32Q8NFA0 1604 aa18.57■□□□□ 0.56
RAB40B-211ENST00000576359 PLIN1O60240 522 aa18.57■□□□□ 0.56
RAB40B-211ENST00000576359 DUSP27Q5VZP5 1158 aa18.57■□□□□ 0.56
RAB40B-211ENST00000576359 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
RAB40B-211ENST00000576359 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
RAB40B-211ENST00000576359 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
RAB40B-211ENST00000576359 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms