RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 SLC52A1Q9NWF4 448 aa20.28■□□□□ 0.84
PSMB6-204ENST00000575643 NUP155O75694 1391 aa20.28■□□□□ 0.84
PSMB6-204ENST00000575643 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
PSMB6-204ENST00000575643 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
PSMB6-204ENST00000575643 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
PSMB6-204ENST00000575643 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
PSMB6-204ENST00000575643 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
PSMB6-204ENST00000575643 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
PSMB6-204ENST00000575643 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
PSMB6-204ENST00000575643 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
PSMB6-204ENST00000575643 NAIPQ13075 1403 aa20.23■□□□□ 0.83
PSMB6-204ENST00000575643 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
PSMB6-204ENST00000575643 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
PSMB6-204ENST00000575643 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
PSMB6-204ENST00000575643 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
PSMB6-204ENST00000575643 TRPM2O94759 1503 aa20.18■□□□□ 0.82
PSMB6-204ENST00000575643 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
PSMB6-204ENST00000575643 ROBO1Q9Y6N7 1651 aa20.18■□□□□ 0.82
PSMB6-204ENST00000575643 ADAMTS13Q76LX8 1427 aa20.18■□□□□ 0.82
PSMB6-204ENST00000575643 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
PSMB6-204ENST00000575643 KCNA6P17658 529 aa20.17■□□□□ 0.82
PSMB6-204ENST00000575643 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
PSMB6-204ENST00000575643 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
PSMB6-204ENST00000575643 HFM1A2PYH4 1435 aa20.16■□□□□ 0.82
PSMB6-204ENST00000575643 BCANQ96GW7 911 aa20.15■□□□□ 0.82
PSMB6-204ENST00000575643 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
PSMB6-204ENST00000575643 NEXMIFQ5QGS0 1516 aa20.12■□□□□ 0.81
PSMB6-204ENST00000575643 XRN1Q8IZH2 1706 aaKnown RBP20.12■□□□□ 0.81
PSMB6-204ENST00000575643 KIF1BO60333 1816 aa20.11■□□□□ 0.81
PSMB6-204ENST00000575643 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
PSMB6-204ENST00000575643 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
PSMB6-204ENST00000575643 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
PSMB6-204ENST00000575643 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
PSMB6-204ENST00000575643 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.07■□□□□ 0.8
PSMB6-204ENST00000575643 MSH6P52701 1360 aa20.07■□□□□ 0.8
PSMB6-204ENST00000575643 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
PSMB6-204ENST00000575643 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
PSMB6-204ENST00000575643 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
PSMB6-204ENST00000575643 PHLPP1O60346 1717 aa20.05■□□□□ 0.8
PSMB6-204ENST00000575643 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
PSMB6-204ENST00000575643 SOCS7O14512 581 aa20.02■□□□□ 0.8
PSMB6-204ENST00000575643 PPLO60437 1756 aa20.01■□□□□ 0.79
PSMB6-204ENST00000575643 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
PSMB6-204ENST00000575643 COL16A1Q07092 1604 aaPredicted RBP20■□□□□ 0.79
PSMB6-204ENST00000575643 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
PSMB6-204ENST00000575643 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
PSMB6-204ENST00000575643 METP08581 1390 aa19.98■□□□□ 0.79
PSMB6-204ENST00000575643 NCOA3Q9Y6Q9 1424 aa19.98■□□□□ 0.79
PSMB6-204ENST00000575643 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
PSMB6-204ENST00000575643 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
PSMB6-204ENST00000575643 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
PSMB6-204ENST00000575643 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
PSMB6-204ENST00000575643 AMOTL2Q9Y2J4 779 aa19.94■□□□□ 0.78
PSMB6-204ENST00000575643 FOXD1Q16676 465 aa19.93■□□□□ 0.78
PSMB6-204ENST00000575643 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
PSMB6-204ENST00000575643 SLAIN2Q9P270 581 aa19.93■□□□□ 0.78
PSMB6-204ENST00000575643 DCCP43146 1447 aa19.92■□□□□ 0.78
PSMB6-204ENST00000575643 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
PSMB6-204ENST00000575643 NHSL1Q5SYE7 1610 aa19.89■□□□□ 0.77
PSMB6-204ENST00000575643 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
PSMB6-204ENST00000575643 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
PSMB6-204ENST00000575643 MST1RQ04912 1400 aa19.87■□□□□ 0.77
PSMB6-204ENST00000575643 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
PSMB6-204ENST00000575643 C19orf44Q9H6X5 657 aa19.87■□□□□ 0.77
PSMB6-204ENST00000575643 CCDC144AA2RUR9 1427 aa19.86■□□□□ 0.77
PSMB6-204ENST00000575643 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
PSMB6-204ENST00000575643 RGS17Q9UGC6 210 aaPredicted RBP19.86■□□□□ 0.77
PSMB6-204ENST00000575643 LRP6O75581 1613 aa19.86■□□□□ 0.77
PSMB6-204ENST00000575643 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
PSMB6-204ENST00000575643 ATF3P18847 181 aa19.85■□□□□ 0.77
PSMB6-204ENST00000575643 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
PSMB6-204ENST00000575643 JCADQ9P266 1359 aa19.83■□□□□ 0.77
PSMB6-204ENST00000575643 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.76
PSMB6-204ENST00000575643 BRINP3Q76B58 766 aa19.82■□□□□ 0.76
PSMB6-204ENST00000575643 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
PSMB6-204ENST00000575643 MPHOSPH9Q99550 1183 aa19.8■□□□□ 0.76
PSMB6-204ENST00000575643 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
PSMB6-204ENST00000575643 RPGRIP1LQ68CZ1 1315 aa19.79■□□□□ 0.76
PSMB6-204ENST00000575643 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
PSMB6-204ENST00000575643 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
PSMB6-204ENST00000575643 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
PSMB6-204ENST00000575643 PIK3C2GO75747 1445 aa19.76■□□□□ 0.75
PSMB6-204ENST00000575643 LAMC1P11047 1609 aa19.76■□□□□ 0.75
PSMB6-204ENST00000575643 CDC42BPGQ6DT37 1551 aa19.76■□□□□ 0.75
PSMB6-204ENST00000575643 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
PSMB6-204ENST00000575643 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
PSMB6-204ENST00000575643 POTEAQ6S8J7 498 aa19.74■□□□□ 0.75
PSMB6-204ENST00000575643 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
PSMB6-204ENST00000575643 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
PSMB6-204ENST00000575643 TECPR2O15040 1411 aa19.71■□□□□ 0.75
PSMB6-204ENST00000575643 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
PSMB6-204ENST00000575643 MYOM2P54296 1465 aa19.7■□□□□ 0.74
PSMB6-204ENST00000575643 NRXN1Q9ULB1 1477 aa19.7■□□□□ 0.74
PSMB6-204ENST00000575643 FMN2Q9NZ56 1722 aa19.68■□□□□ 0.74
PSMB6-204ENST00000575643 LRPPRCP42704 1394 aaKnown RBP19.67■□□□□ 0.74
PSMB6-204ENST00000575643 PNPLA6Q8IY17 1366 aa19.67■□□□□ 0.74
PSMB6-204ENST00000575643 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
PSMB6-204ENST00000575643 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.73
PSMB6-204ENST00000575643 STK26Q9P289 416 aa19.64■□□□□ 0.73
PSMB6-204ENST00000575643 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms