RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 RALBP1Q15311 655 aa9.29□□□□□ -0.92
SMG6-217ENST00000575338 AGLP35573 1532 aa9.29□□□□□ -0.92
SMG6-217ENST00000575338 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
SMG6-217ENST00000575338 PREX1Q8TCU6 1659 aa9.28□□□□□ -0.92
SMG6-217ENST00000575338 NPATQ14207 1427 aa9.28□□□□□ -0.92
SMG6-217ENST00000575338 SYNMO15061 1565 aa9.28□□□□□ -0.92
SMG6-217ENST00000575338 NRXN1Q9ULB1 1477 aa9.28□□□□□ -0.92
SMG6-217ENST00000575338 NEFLP07196 543 aa9.27□□□□□ -0.93
SMG6-217ENST00000575338 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.93
SMG6-217ENST00000575338 GGT6Q6P531 493 aa9.27□□□□□ -0.93
SMG6-217ENST00000575338 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
SMG6-217ENST00000575338 NOS1P29475 1434 aa9.27□□□□□ -0.93
SMG6-217ENST00000575338 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
SMG6-217ENST00000575338 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
SMG6-217ENST00000575338 BRD4O60885 1362 aaPredicted RBP9.25□□□□□ -0.93
SMG6-217ENST00000575338 SIGLEC1Q9BZZ2 1709 aa9.25□□□□□ -0.93
SMG6-217ENST00000575338 RAPGEF3O95398 923 aa9.25□□□□□ -0.93
SMG6-217ENST00000575338 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
SMG6-217ENST00000575338 HNRNPUQ00839 825 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMG6-217ENST00000575338 NBPF1Q3BBV0 1214 aa9.24□□□□□ -0.93
SMG6-217ENST00000575338 ARHGEF40Q8TER5 1519 aa9.24□□□□□ -0.93
SMG6-217ENST00000575338 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
SMG6-217ENST00000575338 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
SMG6-217ENST00000575338 VGFO15240 615 aaPredicted RBP9.23□□□□□ -0.93
SMG6-217ENST00000575338 TESK2Q96S53 571 aa9.23□□□□□ -0.93
SMG6-217ENST00000575338 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 ZFYVE9O95405 1425 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 ZBED9Q6R2W3 1325 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 QRICH2Q9H0J4 1663 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 YEATS2Q9ULM3 1422 aa9.22□□□□□ -0.93
SMG6-217ENST00000575338 CLTCQ00610 1675 aaKnown RBP9.21□□□□□ -0.93
SMG6-217ENST00000575338 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.94
SMG6-217ENST00000575338 INSRP06213 1382 aa9.21□□□□□ -0.94
SMG6-217ENST00000575338 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.94
SMG6-217ENST00000575338 MYOM1P52179 1685 aa9.2□□□□□ -0.94
SMG6-217ENST00000575338 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
SMG6-217ENST00000575338 NLRP13Q86W25 1043 aa9.2□□□□□ -0.94
SMG6-217ENST00000575338 PARD3Q8TEW0 1356 aa9.2□□□□□ -0.94
SMG6-217ENST00000575338 DISP3Q9P2K9 1392 aa9.2□□□□□ -0.94
SMG6-217ENST00000575338 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
SMG6-217ENST00000575338 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
SMG6-217ENST00000575338 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
SMG6-217ENST00000575338 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
SMG6-217ENST00000575338 ERVK-7P63135 1459 aa9.18□□□□□ -0.94
SMG6-217ENST00000575338 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
SMG6-217ENST00000575338 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
SMG6-217ENST00000575338 ASXL1Q8IXJ9 1541 aa9.18□□□□□ -0.94
SMG6-217ENST00000575338 PUS7Q96PZ0 661 aaKnown RBP9.18□□□□□ -0.94
SMG6-217ENST00000575338 ESF1Q9H501 851 aaKnown RBP9.18□□□□□ -0.94
SMG6-217ENST00000575338 C14orf93Q9H972 538 aaKnown RBP9.18□□□□□ -0.94
SMG6-217ENST00000575338 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
SMG6-217ENST00000575338 CENPJQ9HC77 1338 aaPredicted RBP9.17□□□□□ -0.94
SMG6-217ENST00000575338 ADGRB1O14514 1584 aa9.16□□□□□ -0.94
SMG6-217ENST00000575338 ADGRF5Q8IZF2 1346 aa9.16□□□□□ -0.94
SMG6-217ENST00000575338 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
SMG6-217ENST00000575338 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
SMG6-217ENST00000575338 PANK3Q9H999 370 aa9.16□□□□□ -0.94
SMG6-217ENST00000575338 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
SMG6-217ENST00000575338 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
SMG6-217ENST00000575338 LRPPRCP42704 1394 aaKnown RBP9.15□□□□□ -0.94
SMG6-217ENST00000575338 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
SMG6-217ENST00000575338 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
SMG6-217ENST00000575338 PNISRQ8TF01 805 aaKnown RBP9.14□□□□□ -0.95
SMG6-217ENST00000575338 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
SMG6-217ENST00000575338 PDE3BQ13370 1112 aa9.13□□□□□ -0.95
SMG6-217ENST00000575338 IDI1Q13907 227 aa9.13□□□□□ -0.95
SMG6-217ENST00000575338 AEBP2Q6ZN18 517 aaPredicted RBP9.13□□□□□ -0.95
SMG6-217ENST00000575338 EVC2Q86UK5 1308 aa9.12□□□□□ -0.95
SMG6-217ENST00000575338 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
SMG6-217ENST00000575338 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMG6-217ENST00000575338 SMG6Q86US8 1419 aaKnown RBP9.12□□□□□ -0.95
SMG6-217ENST00000575338 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
SMG6-217ENST00000575338 FKBP8Q14318 412 aa9.1□□□□□ -0.95
SMG6-217ENST00000575338 KNDC1Q76NI1 1749 aa9.1□□□□□ -0.95
SMG6-217ENST00000575338 NSD2O96028 1365 aa9.1□□□□□ -0.95
SMG6-217ENST00000575338 ALKQ9UM73 1620 aa9.09□□□□□ -0.95
SMG6-217ENST00000575338 CC2D1BQ5T0F9 858 aaKnown RBP9.09□□□□□ -0.95
SMG6-217ENST00000575338 NGEFQ8N5V2 710 aa9.09□□□□□ -0.95
SMG6-217ENST00000575338 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
SMG6-217ENST00000575338 NUDCQ9Y266 331 aa9.09□□□□□ -0.95
SMG6-217ENST00000575338 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
SMG6-217ENST00000575338 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
SMG6-217ENST00000575338 ANKRD26Q9UPS8 1709 aa9.08□□□□□ -0.96
SMG6-217ENST00000575338 BLMP54132 1417 aaPredicted RBP9.08□□□□□ -0.96
SMG6-217ENST00000575338 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
SMG6-217ENST00000575338 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMG6-217ENST00000575338 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
SMG6-217ENST00000575338 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
SMG6-217ENST00000575338 SETD1AO15047 1707 aaKnown RBP9.08□□□□□ -0.96
SMG6-217ENST00000575338 YTHDC2Q9H6S0 1430 aaKnown RBP9.07□□□□□ -0.96
SMG6-217ENST00000575338 UBR1Q8IWV7 1749 aa9.07□□□□□ -0.96
SMG6-217ENST00000575338 ZMYM3Q14202 1370 aa9.07□□□□□ -0.96
SMG6-217ENST00000575338 NLRP1Q9C000 1473 aa9.07□□□□□ -0.96
SMG6-217ENST00000575338 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
SMG6-217ENST00000575338 RIMS2Q9UQ26 1411 aa9.06□□□□□ -0.96
SMG6-217ENST00000575338 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
SMG6-217ENST00000575338 PTPRMP28827 1452 aa9.05□□□□□ -0.96
SMG6-217ENST00000575338 TNRQ92752 1358 aa9.05□□□□□ -0.96
SMG6-217ENST00000575338 PPP2R1AP30153 589 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms