RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 POTEAQ6S8J7 498 aa32.48■■■□□ 2.79
SPNS3-203ENST00000575185 PHLPP1O60346 1717 aa32.47■■■□□ 2.79
SPNS3-203ENST00000575185 ADGRL2O95490 1459 aa32.47■■■□□ 2.79
SPNS3-203ENST00000575185 CHD2O14647 1828 aaKnown RBP32.45■■■□□ 2.79
SPNS3-203ENST00000575185 SETD1AO15047 1707 aaKnown RBP32.43■■■□□ 2.78
SPNS3-203ENST00000575185 ZFYVE9O95405 1425 aa32.43■■■□□ 2.78
SPNS3-203ENST00000575185 BCANQ96GW7 911 aa32.42■■■□□ 2.78
SPNS3-203ENST00000575185 MSH6P52701 1360 aa32.41■■■□□ 2.78
SPNS3-203ENST00000575185 TMEM131LA2VDJ0 1609 aa32.4■■■□□ 2.78
SPNS3-203ENST00000575185 SLC52A1Q9NWF4 448 aa32.39■■■□□ 2.78
SPNS3-203ENST00000575185 RPRD2Q5VT52 1461 aaKnown RBP32.39■■■□□ 2.78
SPNS3-203ENST00000575185 PLEKHG1Q9ULL1 1385 aa32.36■■■□□ 2.77
SPNS3-203ENST00000575185 ANKRD50Q9ULJ7 1429 aa32.35■■■□□ 2.77
SPNS3-203ENST00000575185 RIMS2Q9UQ26 1411 aa32.35■■■□□ 2.77
SPNS3-203ENST00000575185 COL16A1Q07092 1604 aaPredicted RBP32.34■■■□□ 2.77
SPNS3-203ENST00000575185 SLAIN2Q9P270 581 aa32.33■■■□□ 2.77
SPNS3-203ENST00000575185 FAM50AQ14320 339 aaKnown RBP32.31■■■□□ 2.76
SPNS3-203ENST00000575185 UNC13BO14795 1591 aa32.31■■■□□ 2.76
SPNS3-203ENST00000575185 E9PCH4 1651 aa32.3■■■□□ 2.76
SPNS3-203ENST00000575185 PPP1R15AO75807 674 aaPredicted RBP32.29■■■□□ 2.76
SPNS3-203ENST00000575185 JCADQ9P266 1359 aa32.28■■■□□ 2.76
SPNS3-203ENST00000575185 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.26■■■□□ 2.75
SPNS3-203ENST00000575185 LRP6O75581 1613 aa32.24■■■□□ 2.75
SPNS3-203ENST00000575185 ADAMTS13Q76LX8 1427 aa32.23■■■□□ 2.75
SPNS3-203ENST00000575185 NUTM2DQ5VT03 806 aaPredicted RBP32.22■■■□□ 2.75
SPNS3-203ENST00000575185 DIP2AQ14689 1571 aa32.2■■■□□ 2.75
SPNS3-203ENST00000575185 CHGAP10645 457 aaKnown RBP32.2■■■□□ 2.75
SPNS3-203ENST00000575185 TBX22Q9Y458 520 aa32.19■■■□□ 2.74
SPNS3-203ENST00000575185 AHDC1Q5TGY3 1603 aaPredicted RBP32.18■■■□□ 2.74
SPNS3-203ENST00000575185 IQGAP3Q86VI3 1631 aa32.18■■■□□ 2.74
SPNS3-203ENST00000575185 SHPRHQ149N8 1683 aa32.17■■■□□ 2.74
SPNS3-203ENST00000575185 NCOA3Q9Y6Q9 1424 aa32.17■■■□□ 2.74
SPNS3-203ENST00000575185 HDGFP51858 240 aaKnown RBP32.16■■■□□ 2.74
SPNS3-203ENST00000575185 C14orf37Q86TY3 774 aa32.16■■■□□ 2.74
SPNS3-203ENST00000575185 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.13■■■□□ 2.73
SPNS3-203ENST00000575185 TRPM2O94759 1503 aa32.11■■■□□ 2.73
SPNS3-203ENST00000575185 PTPRUQ92729 1446 aa32.09■■■□□ 2.73
SPNS3-203ENST00000575185 SPATA31A6Q5VVP1 1343 aa32.09■■■□□ 2.73
SPNS3-203ENST00000575185 NRXN3Q9Y4C0 1643 aa32.08■■■□□ 2.73
SPNS3-203ENST00000575185 PIK3R4Q99570 1358 aa32.07■■■□□ 2.73
SPNS3-203ENST00000575185 CADPS2Q86UW7 1296 aa32.07■■■□□ 2.72
SPNS3-203ENST00000575185 MEX3CQ5U5Q3 659 aaKnown RBP32.06■■■□□ 2.72
SPNS3-203ENST00000575185 C19orf44Q9H6X5 657 aa32.06■■■□□ 2.72
SPNS3-203ENST00000575185 ATF3P18847 181 aa32.05■■■□□ 2.72
SPNS3-203ENST00000575185 XRN1Q8IZH2 1706 aaKnown RBP32.05■■■□□ 2.72
SPNS3-203ENST00000575185 ROCK1Q13464 1354 aa32.02■■■□□ 2.72
SPNS3-203ENST00000575185 AMOTL2Q9Y2J4 779 aa32.01■■■□□ 2.71
SPNS3-203ENST00000575185 BRINP3Q76B58 766 aa32■■■□□ 2.71
SPNS3-203ENST00000575185 TRIM52Q96A61 297 aa32■■■□□ 2.71
SPNS3-203ENST00000575185 SPHKAPQ2M3C7 1700 aa32■■■□□ 2.71
SPNS3-203ENST00000575185 ASXL1Q8IXJ9 1541 aa31.99■■■□□ 2.71
SPNS3-203ENST00000575185 NUP155O75694 1391 aa31.98■■■□□ 2.71
SPNS3-203ENST00000575185 ZNF772Q68DY9 489 aaPredicted RBP31.98■■■□□ 2.71
SPNS3-203ENST00000575185 NHSL1Q5SYE7 1610 aa31.97■■■□□ 2.71
SPNS3-203ENST00000575185 SETBP1Q9Y6X0 1596 aa31.97■■■□□ 2.71
SPNS3-203ENST00000575185 DCCP43146 1447 aa31.95■■■□□ 2.71
SPNS3-203ENST00000575185 UPF1Q92900 1129 aaKnown RBP eCLIP31.94■■■□□ 2.7
SPNS3-203ENST00000575185 NUTM2BA6NNL0 878 aaPredicted RBP31.93■■■□□ 2.7
SPNS3-203ENST00000575185 NUTM2EB1AL46 878 aaPredicted RBP31.93■■■□□ 2.7
SPNS3-203ENST00000575185 NUTM2AQ8IVF1 878 aaPredicted RBP31.93■■■□□ 2.7
SPNS3-203ENST00000575185 MST1RQ04912 1400 aa31.92■■■□□ 2.7
SPNS3-203ENST00000575185 NALCNQ8IZF0 1738 aa31.9■■■□□ 2.7
SPNS3-203ENST00000575185 ITGAEP38570 1179 aa31.89■■■□□ 2.7
SPNS3-203ENST00000575185 METP08581 1390 aa31.88■■■□□ 2.69
SPNS3-203ENST00000575185 SETD5Q9C0A6 1442 aa31.87■■■□□ 2.69
SPNS3-203ENST00000575185 RXRBP28702 533 aa31.85■■■□□ 2.69
SPNS3-203ENST00000575185 CLTCL1P53675 1640 aa31.85■■■□□ 2.69
SPNS3-203ENST00000575185 AFF2P51816 1311 aa31.84■■■□□ 2.69
SPNS3-203ENST00000575185 NEXMIFQ5QGS0 1516 aa31.83■■■□□ 2.69
SPNS3-203ENST00000575185 ZNF326Q5BKZ1 582 aaKnown RBP31.82■■■□□ 2.68
SPNS3-203ENST00000575185 DDX17Q92841 729 aaKnown RBP31.82■■■□□ 2.68
SPNS3-203ENST00000575185 CDK12Q9NYV4 1490 aaPredicted RBP31.82■■■□□ 2.68
SPNS3-203ENST00000575185 ADGRL3Q9HAR2 1447 aa31.81■■■□□ 2.68
SPNS3-203ENST00000575185 PNPLA6Q8IY17 1366 aa31.77■■■□□ 2.68
SPNS3-203ENST00000575185 RGS12O14924 1447 aa31.75■■■□□ 2.67
SPNS3-203ENST00000575185 KIF1BO60333 1816 aa31.75■■■□□ 2.67
SPNS3-203ENST00000575185 LRRC59Q96AG4 307 aaKnown RBP31.73■■■□□ 2.67
SPNS3-203ENST00000575185 C8orf37Q96NL8 207 aa31.73■■■□□ 2.67
SPNS3-203ENST00000575185 PPARGC1BQ86YN6 1023 aaKnown RBP31.72■■■□□ 2.67
SPNS3-203ENST00000575185 LAMC1P11047 1609 aa31.7■■■□□ 2.66
SPNS3-203ENST00000575185 C1orf167Q5SNV9 1468 aa31.68■■■□□ 2.66
SPNS3-203ENST00000575185 QTRT2Q9H974 415 aaKnown RBP31.65■■■□□ 2.66
SPNS3-203ENST00000575185 PTCH1Q13635 1447 aa31.63■■■□□ 2.65
SPNS3-203ENST00000575185 ADAMTS2O95450 1211 aa31.62■■■□□ 2.65
SPNS3-203ENST00000575185 RBM6P78332 1123 aaKnown RBP31.62■■■□□ 2.65
SPNS3-203ENST00000575185 ROBO2Q9HCK4 1378 aa31.61■■■□□ 2.65
SPNS3-203ENST00000575185 SRCAPQ6ZRS2 3230 aa31.6■■■□□ 2.65
SPNS3-203ENST00000575185 ORAI2Q96SN7 254 aa31.58■■■□□ 2.65
SPNS3-203ENST00000575185 NGLY1Q96IV0 654 aa31.57■■■□□ 2.64
SPNS3-203ENST00000575185 PPLO60437 1756 aa31.56■■■□□ 2.64
SPNS3-203ENST00000575185 NAIPQ13075 1403 aa31.55■■■□□ 2.64
SPNS3-203ENST00000575185 SOS2Q07890 1332 aaPredicted RBP31.54■■■□□ 2.64
SPNS3-203ENST00000575185 COL22A1Q8NFW1 1626 aaPredicted RBP31.54■■■□□ 2.64
SPNS3-203ENST00000575185 PRAG1Q86YV5 1406 aa31.52■■■□□ 2.64
SPNS3-203ENST00000575185 EP400Q96L91 3159 aa31.51■■■□□ 2.64
SPNS3-203ENST00000575185 USP21Q9UK80 565 aa31.48■■■□□ 2.63
SPNS3-203ENST00000575185 VGFO15240 615 aaPredicted RBP31.47■■■□□ 2.63
SPNS3-203ENST00000575185 MARF1Q9Y4F3 1742 aaKnown RBP31.46■■■□□ 2.63
SPNS3-203ENST00000575185 RRBP1Q9P2E9 1410 aaKnown RBP31.46■■■□□ 2.63
SPNS3-203ENST00000575185 CDC42BPGQ6DT37 1551 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms