RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
SMG6-216ENST00000575176 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
SMG6-216ENST00000575176 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
SMG6-216ENST00000575176 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
SMG6-216ENST00000575176 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
SMG6-216ENST00000575176 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
SMG6-216ENST00000575176 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
SMG6-216ENST00000575176 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
SMG6-216ENST00000575176 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
SMG6-216ENST00000575176 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
SMG6-216ENST00000575176 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
SMG6-216ENST00000575176 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
SMG6-216ENST00000575176 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
SMG6-216ENST00000575176 FBXO41Q8TF61 875 aa13.11□□□□□ -0.31
SMG6-216ENST00000575176 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
SMG6-216ENST00000575176 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
SMG6-216ENST00000575176 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
SMG6-216ENST00000575176 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
SMG6-216ENST00000575176 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
SMG6-216ENST00000575176 FOXD1Q16676 465 aa13.07□□□□□ -0.32
SMG6-216ENST00000575176 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
SMG6-216ENST00000575176 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
SMG6-216ENST00000575176 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
SMG6-216ENST00000575176 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
SMG6-216ENST00000575176 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
SMG6-216ENST00000575176 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
SMG6-216ENST00000575176 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SMG6-216ENST00000575176 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
SMG6-216ENST00000575176 MYOM2P54296 1465 aa13.03□□□□□ -0.32
SMG6-216ENST00000575176 LAMC1P11047 1609 aa13.02□□□□□ -0.32
SMG6-216ENST00000575176 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
SMG6-216ENST00000575176 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
SMG6-216ENST00000575176 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
SMG6-216ENST00000575176 HRCP23327 699 aa13.01□□□□□ -0.33
SMG6-216ENST00000575176 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
SMG6-216ENST00000575176 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
SMG6-216ENST00000575176 METP08581 1390 aa13.01□□□□□ -0.33
SMG6-216ENST00000575176 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
SMG6-216ENST00000575176 NUTM2DQ5VT03 806 aaPredicted RBP13□□□□□ -0.33
SMG6-216ENST00000575176 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
SMG6-216ENST00000575176 KCNA6P17658 529 aa12.98□□□□□ -0.33
SMG6-216ENST00000575176 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
SMG6-216ENST00000575176 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
SMG6-216ENST00000575176 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
SMG6-216ENST00000575176 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SMG6-216ENST00000575176 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMG6-216ENST00000575176 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
SMG6-216ENST00000575176 TECPR2O15040 1411 aa12.96□□□□□ -0.34
SMG6-216ENST00000575176 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
SMG6-216ENST00000575176 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
SMG6-216ENST00000575176 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
SMG6-216ENST00000575176 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
SMG6-216ENST00000575176 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
SMG6-216ENST00000575176 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
SMG6-216ENST00000575176 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
SMG6-216ENST00000575176 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
SMG6-216ENST00000575176 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
SMG6-216ENST00000575176 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
SMG6-216ENST00000575176 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
SMG6-216ENST00000575176 DCCP43146 1447 aa12.92□□□□□ -0.34
SMG6-216ENST00000575176 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
SMG6-216ENST00000575176 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
SMG6-216ENST00000575176 ROBO2Q9HCK4 1378 aa12.91□□□□□ -0.34
SMG6-216ENST00000575176 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
SMG6-216ENST00000575176 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
SMG6-216ENST00000575176 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
SMG6-216ENST00000575176 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
SMG6-216ENST00000575176 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
SMG6-216ENST00000575176 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
SMG6-216ENST00000575176 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
SMG6-216ENST00000575176 MST1RQ04912 1400 aa12.88□□□□□ -0.35
SMG6-216ENST00000575176 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
SMG6-216ENST00000575176 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
SMG6-216ENST00000575176 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
SMG6-216ENST00000575176 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
SMG6-216ENST00000575176 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
SMG6-216ENST00000575176 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
SMG6-216ENST00000575176 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
SMG6-216ENST00000575176 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
SMG6-216ENST00000575176 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
SMG6-216ENST00000575176 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
SMG6-216ENST00000575176 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
SMG6-216ENST00000575176 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
SMG6-216ENST00000575176 MSH6P52701 1360 aa12.84□□□□□ -0.35
SMG6-216ENST00000575176 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
SMG6-216ENST00000575176 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.36
SMG6-216ENST00000575176 HSPA1LP34931 641 aa12.83□□□□□ -0.36
SMG6-216ENST00000575176 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
SMG6-216ENST00000575176 TOM1O60784 492 aa12.82□□□□□ -0.36
SMG6-216ENST00000575176 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
SMG6-216ENST00000575176 BCANQ96GW7 911 aa12.81□□□□□ -0.36
SMG6-216ENST00000575176 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
SMG6-216ENST00000575176 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
SMG6-216ENST00000575176 C1orf167Q5SNV9 1468 aa12.79□□□□□ -0.36
SMG6-216ENST00000575176 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
SMG6-216ENST00000575176 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
SMG6-216ENST00000575176 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
SMG6-216ENST00000575176 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
SMG6-216ENST00000575176 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.36
SMG6-216ENST00000575176 ABCA3Q99758 1704 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms