RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
PRPF8-212ENST00000575116 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
PRPF8-212ENST00000575116 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
PRPF8-212ENST00000575116 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
PRPF8-212ENST00000575116 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
PRPF8-212ENST00000575116 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
PRPF8-212ENST00000575116 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRPF8-212ENST00000575116 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
PRPF8-212ENST00000575116 NRXN1Q9ULB1 1477 aa16.96■□□□□ 0.31
PRPF8-212ENST00000575116 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
PRPF8-212ENST00000575116 CEP170BQ9Y4F5 1589 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-212ENST00000575116 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
PRPF8-212ENST00000575116 RIMS2Q9UQ26 1411 aa16.95■□□□□ 0.3
PRPF8-212ENST00000575116 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
PRPF8-212ENST00000575116 SLIT1O75093 1534 aa16.93■□□□□ 0.3
PRPF8-212ENST00000575116 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
PRPF8-212ENST00000575116 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
PRPF8-212ENST00000575116 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
PRPF8-212ENST00000575116 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
PRPF8-212ENST00000575116 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
PRPF8-212ENST00000575116 TRPM1Q7Z4N2 1603 aa16.9■□□□□ 0.3
PRPF8-212ENST00000575116 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
PRPF8-212ENST00000575116 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
PRPF8-212ENST00000575116 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
PRPF8-212ENST00000575116 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
PRPF8-212ENST00000575116 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PRPF8-212ENST00000575116 LTKP29376 864 aa16.86■□□□□ 0.29
PRPF8-212ENST00000575116 LAMC1P11047 1609 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 ANKLE2Q86XL3 938 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
PRPF8-212ENST00000575116 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
PRPF8-212ENST00000575116 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF8-212ENST00000575116 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
PRPF8-212ENST00000575116 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
PRPF8-212ENST00000575116 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 ADGRB1O14514 1584 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 BCANQ96GW7 911 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 TBX22Q9Y458 520 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 MED14O60244 1454 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
PRPF8-212ENST00000575116 USP47Q96K76 1375 aa16.77■□□□□ 0.28
PRPF8-212ENST00000575116 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
PRPF8-212ENST00000575116 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
PRPF8-212ENST00000575116 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
PRPF8-212ENST00000575116 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
PRPF8-212ENST00000575116 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
PRPF8-212ENST00000575116 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
PRPF8-212ENST00000575116 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
PRPF8-212ENST00000575116 POLR1AO95602 1720 aaPredicted RBP16.75■□□□□ 0.27
PRPF8-212ENST00000575116 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
PRPF8-212ENST00000575116 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
PRPF8-212ENST00000575116 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
PRPF8-212ENST00000575116 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
PRPF8-212ENST00000575116 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
PRPF8-212ENST00000575116 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
PRPF8-212ENST00000575116 METP08581 1390 aa16.72■□□□□ 0.27
PRPF8-212ENST00000575116 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
PRPF8-212ENST00000575116 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
PRPF8-212ENST00000575116 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.27
PRPF8-212ENST00000575116 SIRT1Q96EB6 747 aa16.71■□□□□ 0.27
PRPF8-212ENST00000575116 SLC26A8Q96RN1 970 aa16.71■□□□□ 0.27
PRPF8-212ENST00000575116 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
PRPF8-212ENST00000575116 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
PRPF8-212ENST00000575116 HSPA2P54652 639 aa16.7■□□□□ 0.26
PRPF8-212ENST00000575116 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
PRPF8-212ENST00000575116 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
PRPF8-212ENST00000575116 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
PRPF8-212ENST00000575116 STK26Q9P289 416 aa16.67■□□□□ 0.26
PRPF8-212ENST00000575116 TECPR2O15040 1411 aa16.67■□□□□ 0.26
PRPF8-212ENST00000575116 CENPJQ9HC77 1338 aaPredicted RBP16.67■□□□□ 0.26
PRPF8-212ENST00000575116 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
PRPF8-212ENST00000575116 KNDC1Q76NI1 1749 aa16.65■□□□□ 0.26
PRPF8-212ENST00000575116 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
PRPF8-212ENST00000575116 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
PRPF8-212ENST00000575116 TESK2Q96S53 571 aa16.65■□□□□ 0.26
PRPF8-212ENST00000575116 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
PRPF8-212ENST00000575116 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.25
PRPF8-212ENST00000575116 PTPRUQ92729 1446 aa16.63■□□□□ 0.25
PRPF8-212ENST00000575116 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
PRPF8-212ENST00000575116 CPS1P31327 1500 aa16.63■□□□□ 0.25
PRPF8-212ENST00000575116 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
PRPF8-212ENST00000575116 TMF1P82094 1093 aa16.62■□□□□ 0.25
PRPF8-212ENST00000575116 POGKQ9P215 609 aa16.62■□□□□ 0.25
PRPF8-212ENST00000575116 KCNA6P17658 529 aa16.61■□□□□ 0.25
PRPF8-212ENST00000575116 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
PRPF8-212ENST00000575116 XRN1Q8IZH2 1706 aaKnown RBP16.6■□□□□ 0.25
PRPF8-212ENST00000575116 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
PRPF8-212ENST00000575116 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
PRPF8-212ENST00000575116 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
PRPF8-212ENST00000575116 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
PRPF8-212ENST00000575116 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-212ENST00000575116 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
PRPF8-212ENST00000575116 ROBO2Q9HCK4 1378 aa16.58■□□□□ 0.24
PRPF8-212ENST00000575116 NWD1Q149M9 1564 aa16.57■□□□□ 0.24
PRPF8-212ENST00000575116 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
PRPF8-212ENST00000575116 WASHC2AQ641Q2 1341 aa16.57■□□□□ 0.24
PRPF8-212ENST00000575116 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms