RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 RIMS2Q9UQ26 1411 aa24.83■■□□□ 1.57
TVP23B-207ENST00000574294 SPHKAPQ2M3C7 1700 aa24.83■■□□□ 1.57
TVP23B-207ENST00000574294 PPP1R15AO75807 674 aaPredicted RBP24.82■■□□□ 1.56
TVP23B-207ENST00000574294 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
TVP23B-207ENST00000574294 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
TVP23B-207ENST00000574294 BCANQ96GW7 911 aa24.8■■□□□ 1.56
TVP23B-207ENST00000574294 KCNA6P17658 529 aa24.79■■□□□ 1.56
TVP23B-207ENST00000574294 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
TVP23B-207ENST00000574294 SLC26A8Q96RN1 970 aa24.77■■□□□ 1.56
TVP23B-207ENST00000574294 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
TVP23B-207ENST00000574294 TBX22Q9Y458 520 aa24.74■■□□□ 1.55
TVP23B-207ENST00000574294 NKTRP30414 1462 aaKnown RBP24.74■■□□□ 1.55
TVP23B-207ENST00000574294 TRPM2O94759 1503 aa24.73■■□□□ 1.55
TVP23B-207ENST00000574294 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
TVP23B-207ENST00000574294 NWD1Q149M9 1564 aa24.72■■□□□ 1.55
TVP23B-207ENST00000574294 PIP4K2BP78356 416 aa24.72■■□□□ 1.55
TVP23B-207ENST00000574294 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
TVP23B-207ENST00000574294 SLC4A1APQ9BWU0 796 aaKnown RBP24.7■■□□□ 1.54
TVP23B-207ENST00000574294 XIRP1Q702N8 1843 aaKnown RBP24.69■■□□□ 1.54
TVP23B-207ENST00000574294 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
TVP23B-207ENST00000574294 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
TVP23B-207ENST00000574294 PROSER2Q86WR7 435 aaPredicted RBP24.68■■□□□ 1.54
TVP23B-207ENST00000574294 KIF1BO60333 1816 aa24.67■■□□□ 1.54
TVP23B-207ENST00000574294 ALKQ9UM73 1620 aa24.67■■□□□ 1.54
TVP23B-207ENST00000574294 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
TVP23B-207ENST00000574294 CLTCL1P53675 1640 aa24.65■■□□□ 1.54
TVP23B-207ENST00000574294 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
TVP23B-207ENST00000574294 ADAMTS13Q76LX8 1427 aa24.64■■□□□ 1.54
TVP23B-207ENST00000574294 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
TVP23B-207ENST00000574294 HSPA1LP34931 641 aa24.61■■□□□ 1.53
TVP23B-207ENST00000574294 NUTM2DQ5VT03 806 aaPredicted RBP24.61■■□□□ 1.53
TVP23B-207ENST00000574294 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
TVP23B-207ENST00000574294 MSH6P52701 1360 aa24.59■■□□□ 1.53
TVP23B-207ENST00000574294 DISP3Q9P2K9 1392 aa24.59■■□□□ 1.53
TVP23B-207ENST00000574294 RPGRIP1LQ68CZ1 1315 aa24.58■■□□□ 1.52
TVP23B-207ENST00000574294 NEXMIFQ5QGS0 1516 aa24.56■■□□□ 1.52
TVP23B-207ENST00000574294 FAM135BQ49AJ0 1406 aa24.56■■□□□ 1.52
TVP23B-207ENST00000574294 SETD5Q9C0A6 1442 aa24.56■■□□□ 1.52
TVP23B-207ENST00000574294 VGFO15240 615 aaPredicted RBP24.55■■□□□ 1.52
TVP23B-207ENST00000574294 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
TVP23B-207ENST00000574294 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
TVP23B-207ENST00000574294 AMOTL2Q9Y2J4 779 aa24.51■■□□□ 1.51
TVP23B-207ENST00000574294 CCDC144AA2RUR9 1427 aa24.51■■□□□ 1.51
TVP23B-207ENST00000574294 RBM33Q96EV2 1170 aaKnown RBP24.49■■□□□ 1.51
TVP23B-207ENST00000574294 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
TVP23B-207ENST00000574294 C19orf44Q9H6X5 657 aa24.48■■□□□ 1.51
TVP23B-207ENST00000574294 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
TVP23B-207ENST00000574294 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
TVP23B-207ENST00000574294 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
TVP23B-207ENST00000574294 PTPRUQ92729 1446 aa24.45■■□□□ 1.51
TVP23B-207ENST00000574294 FOXD1Q16676 465 aa24.45■■□□□ 1.5
TVP23B-207ENST00000574294 PPLO60437 1756 aa24.44■■□□□ 1.5
TVP23B-207ENST00000574294 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
TVP23B-207ENST00000574294 METP08581 1390 aa24.43■■□□□ 1.5
TVP23B-207ENST00000574294 ATF3P18847 181 aa24.43■■□□□ 1.5
TVP23B-207ENST00000574294 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
TVP23B-207ENST00000574294 HRCP23327 699 aa24.42■■□□□ 1.5
TVP23B-207ENST00000574294 DCCP43146 1447 aa24.42■■□□□ 1.5
TVP23B-207ENST00000574294 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
TVP23B-207ENST00000574294 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
TVP23B-207ENST00000574294 MED1Q15648 1581 aaPredicted RBP24.4■■□□□ 1.5
TVP23B-207ENST00000574294 SPATA31E1Q6ZUB1 1445 aa24.39■■□□□ 1.5
TVP23B-207ENST00000574294 PRAG1Q86YV5 1406 aa24.35■■□□□ 1.49
TVP23B-207ENST00000574294 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
TVP23B-207ENST00000574294 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
TVP23B-207ENST00000574294 RGL3Q3MIN7 710 aa24.34■■□□□ 1.49
TVP23B-207ENST00000574294 IFT172Q9UG01 1749 aa24.32■■□□□ 1.48
TVP23B-207ENST00000574294 ADGRL3Q9HAR2 1447 aa24.32■■□□□ 1.48
TVP23B-207ENST00000574294 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
TVP23B-207ENST00000574294 ILDR2Q71H61 639 aa24.3■■□□□ 1.48
TVP23B-207ENST00000574294 ADGRF5Q8IZF2 1346 aa24.28■■□□□ 1.48
TVP23B-207ENST00000574294 AHDC1Q5TGY3 1603 aaPredicted RBP24.25■■□□□ 1.47
TVP23B-207ENST00000574294 JCADQ9P266 1359 aa24.25■■□□□ 1.47
TVP23B-207ENST00000574294 PIK3C2GO75747 1445 aa24.25■■□□□ 1.47
TVP23B-207ENST00000574294 MST1RQ04912 1400 aa24.24■■□□□ 1.47
TVP23B-207ENST00000574294 NALCNQ8IZF0 1738 aa24.24■■□□□ 1.47
TVP23B-207ENST00000574294 ROBO2Q9HCK4 1378 aa24.23■■□□□ 1.47
TVP23B-207ENST00000574294 COL16A1Q07092 1604 aaPredicted RBP24.22■■□□□ 1.47
TVP23B-207ENST00000574294 MYOM2P54296 1465 aa24.22■■□□□ 1.47
TVP23B-207ENST00000574294 SOCS7O14512 581 aa24.22■■□□□ 1.47
TVP23B-207ENST00000574294 BRINP3Q76B58 766 aa24.22■■□□□ 1.47
TVP23B-207ENST00000574294 TECPR2O15040 1411 aa24.21■■□□□ 1.47
TVP23B-207ENST00000574294 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
TVP23B-207ENST00000574294 LAMC1P11047 1609 aa24.2■■□□□ 1.46
TVP23B-207ENST00000574294 NRXN1Q9ULB1 1477 aa24.19■■□□□ 1.46
TVP23B-207ENST00000574294 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
TVP23B-207ENST00000574294 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
TVP23B-207ENST00000574294 ASXL1Q8IXJ9 1541 aa24.19■■□□□ 1.46
TVP23B-207ENST00000574294 SPATA31A6Q5VVP1 1343 aa24.17■■□□□ 1.46
TVP23B-207ENST00000574294 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
TVP23B-207ENST00000574294 KNDC1Q76NI1 1749 aa24.16■■□□□ 1.46
TVP23B-207ENST00000574294 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
TVP23B-207ENST00000574294 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
TVP23B-207ENST00000574294 NHSL1Q5SYE7 1610 aa24.14■■□□□ 1.46
TVP23B-207ENST00000574294 YTHDC2Q9H6S0 1430 aaKnown RBP24.13■■□□□ 1.45
TVP23B-207ENST00000574294 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
TVP23B-207ENST00000574294 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
TVP23B-207ENST00000574294 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
TVP23B-207ENST00000574294 STK26Q9P289 416 aa24.12■■□□□ 1.45
TVP23B-207ENST00000574294 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms