RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 E9PCH4 1651 aa20.65■□□□□ 0.9
NUBP1-206ENST00000574137 KCNA6P17658 529 aa20.65■□□□□ 0.9
NUBP1-206ENST00000574137 RIMS2Q9UQ26 1411 aa20.64■□□□□ 0.89
NUBP1-206ENST00000574137 MYO5BQ9ULV0 1848 aa20.62■□□□□ 0.89
NUBP1-206ENST00000574137 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
NUBP1-206ENST00000574137 PROSER2Q86WR7 435 aaPredicted RBP20.62■□□□□ 0.89
NUBP1-206ENST00000574137 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
NUBP1-206ENST00000574137 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
NUBP1-206ENST00000574137 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
NUBP1-206ENST00000574137 PLEKHG1Q9ULL1 1385 aa20.59■□□□□ 0.89
NUBP1-206ENST00000574137 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
NUBP1-206ENST00000574137 TMEM94Q12767 1356 aa20.59■□□□□ 0.89
NUBP1-206ENST00000574137 ALKQ9UM73 1620 aa20.58■□□□□ 0.89
NUBP1-206ENST00000574137 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
NUBP1-206ENST00000574137 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
NUBP1-206ENST00000574137 NAIPQ13075 1403 aa20.55■□□□□ 0.88
NUBP1-206ENST00000574137 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
NUBP1-206ENST00000574137 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
NUBP1-206ENST00000574137 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
NUBP1-206ENST00000574137 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
NUBP1-206ENST00000574137 SPHKAPQ2M3C7 1700 aa20.5■□□□□ 0.87
NUBP1-206ENST00000574137 MSH6P52701 1360 aa20.48■□□□□ 0.87
NUBP1-206ENST00000574137 NWD1Q149M9 1564 aa20.48■□□□□ 0.87
NUBP1-206ENST00000574137 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
NUBP1-206ENST00000574137 C14orf37Q86TY3 774 aa20.48■□□□□ 0.87
NUBP1-206ENST00000574137 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
NUBP1-206ENST00000574137 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
NUBP1-206ENST00000574137 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
NUBP1-206ENST00000574137 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
NUBP1-206ENST00000574137 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
NUBP1-206ENST00000574137 MED1Q15648 1581 aaPredicted RBP20.43■□□□□ 0.86
NUBP1-206ENST00000574137 SOCS7O14512 581 aa20.43■□□□□ 0.86
NUBP1-206ENST00000574137 AMOTL2Q9Y2J4 779 aa20.43■□□□□ 0.86
NUBP1-206ENST00000574137 PIK3R4Q99570 1358 aa20.43■□□□□ 0.86
NUBP1-206ENST00000574137 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
NUBP1-206ENST00000574137 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
NUBP1-206ENST00000574137 TRPM2O94759 1503 aa20.41■□□□□ 0.86
NUBP1-206ENST00000574137 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
NUBP1-206ENST00000574137 ATF3P18847 181 aa20.38■□□□□ 0.85
NUBP1-206ENST00000574137 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
NUBP1-206ENST00000574137 KIF1BO60333 1816 aa20.37■□□□□ 0.85
NUBP1-206ENST00000574137 C19orf44Q9H6X5 657 aa20.37■□□□□ 0.85
NUBP1-206ENST00000574137 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
NUBP1-206ENST00000574137 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
NUBP1-206ENST00000574137 FOXD1Q16676 465 aa20.36■□□□□ 0.85
NUBP1-206ENST00000574137 CADPS2Q86UW7 1296 aa20.36■□□□□ 0.85
NUBP1-206ENST00000574137 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
NUBP1-206ENST00000574137 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
NUBP1-206ENST00000574137 METP08581 1390 aa20.33■□□□□ 0.84
NUBP1-206ENST00000574137 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
NUBP1-206ENST00000574137 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
NUBP1-206ENST00000574137 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
NUBP1-206ENST00000574137 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
NUBP1-206ENST00000574137 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
NUBP1-206ENST00000574137 RGL3Q3MIN7 710 aa20.27■□□□□ 0.84
NUBP1-206ENST00000574137 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.83
NUBP1-206ENST00000574137 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
NUBP1-206ENST00000574137 XRN1Q8IZH2 1706 aaKnown RBP20.25■□□□□ 0.83
NUBP1-206ENST00000574137 ACIN1Q9UKV3 1341 aaKnown RBP20.25■□□□□ 0.83
NUBP1-206ENST00000574137 SETD5Q9C0A6 1442 aa20.24■□□□□ 0.83
NUBP1-206ENST00000574137 JCADQ9P266 1359 aa20.23■□□□□ 0.83
NUBP1-206ENST00000574137 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
NUBP1-206ENST00000574137 DCCP43146 1447 aa20.21■□□□□ 0.83
NUBP1-206ENST00000574137 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
NUBP1-206ENST00000574137 PPLO60437 1756 aa20.19■□□□□ 0.82
NUBP1-206ENST00000574137 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
NUBP1-206ENST00000574137 ADGRF5Q8IZF2 1346 aa20.18■□□□□ 0.82
NUBP1-206ENST00000574137 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
NUBP1-206ENST00000574137 ANKRD30BQ9BXX2 1392 aa20.16■□□□□ 0.82
NUBP1-206ENST00000574137 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
NUBP1-206ENST00000574137 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
NUBP1-206ENST00000574137 MST1RQ04912 1400 aa20.16■□□□□ 0.82
NUBP1-206ENST00000574137 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
NUBP1-206ENST00000574137 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
NUBP1-206ENST00000574137 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
NUBP1-206ENST00000574137 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
NUBP1-206ENST00000574137 STK26Q9P289 416 aa20.14■□□□□ 0.81
NUBP1-206ENST00000574137 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
NUBP1-206ENST00000574137 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
NUBP1-206ENST00000574137 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
NUBP1-206ENST00000574137 POTEAQ6S8J7 498 aa20.12■□□□□ 0.81
NUBP1-206ENST00000574137 NALCNQ8IZF0 1738 aa20.11■□□□□ 0.81
NUBP1-206ENST00000574137 NUTM2BA6NNL0 878 aaPredicted RBP20.11■□□□□ 0.81
NUBP1-206ENST00000574137 NUTM2EB1AL46 878 aaPredicted RBP20.11■□□□□ 0.81
NUBP1-206ENST00000574137 NUTM2AQ8IVF1 878 aaPredicted RBP20.11■□□□□ 0.81
NUBP1-206ENST00000574137 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
NUBP1-206ENST00000574137 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
NUBP1-206ENST00000574137 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
NUBP1-206ENST00000574137 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.81
NUBP1-206ENST00000574137 ORAI2Q96SN7 254 aa20.07■□□□□ 0.8
NUBP1-206ENST00000574137 WAPLQ7Z5K2 1190 aa20.06■□□□□ 0.8
NUBP1-206ENST00000574137 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
NUBP1-206ENST00000574137 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
NUBP1-206ENST00000574137 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
NUBP1-206ENST00000574137 LRP6O75581 1613 aa20.05■□□□□ 0.8
NUBP1-206ENST00000574137 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
NUBP1-206ENST00000574137 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
NUBP1-206ENST00000574137 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
NUBP1-206ENST00000574137 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
NUBP1-206ENST00000574137 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms