RNA–Protein interactions for RNA: ENST00000574042.2

TRIM16L-211, Transcript of tripartite motif containing 16 like, humanhuman

TSL 3

Gene TRIM16L, Length 791 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-211ENST00000574042 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
TRIM16L-211ENST00000574042 DIP2AQ14689 1571 aa17.52■□□□□ 0.39
TRIM16L-211ENST00000574042 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.39
TRIM16L-211ENST00000574042 RIMS2Q9UQ26 1411 aa17.51■□□□□ 0.39
TRIM16L-211ENST00000574042 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
TRIM16L-211ENST00000574042 KCNA6P17658 529 aa17.5■□□□□ 0.39
TRIM16L-211ENST00000574042 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
TRIM16L-211ENST00000574042 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
TRIM16L-211ENST00000574042 ROBO1Q9Y6N7 1651 aa17.47■□□□□ 0.39
TRIM16L-211ENST00000574042 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
TRIM16L-211ENST00000574042 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
TRIM16L-211ENST00000574042 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
TRIM16L-211ENST00000574042 NUP155O75694 1391 aa17.44■□□□□ 0.38
TRIM16L-211ENST00000574042 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
TRIM16L-211ENST00000574042 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
TRIM16L-211ENST00000574042 MSH6P52701 1360 aa17.42■□□□□ 0.38
TRIM16L-211ENST00000574042 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
TRIM16L-211ENST00000574042 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIM16L-211ENST00000574042 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
TRIM16L-211ENST00000574042 TRPM2O94759 1503 aa17.42■□□□□ 0.38
TRIM16L-211ENST00000574042 ADAMTS13Q76LX8 1427 aa17.41■□□□□ 0.38
TRIM16L-211ENST00000574042 BCANQ96GW7 911 aa17.41■□□□□ 0.38
TRIM16L-211ENST00000574042 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
TRIM16L-211ENST00000574042 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
TRIM16L-211ENST00000574042 ITGAEP38570 1179 aa17.39■□□□□ 0.37
TRIM16L-211ENST00000574042 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
TRIM16L-211ENST00000574042 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
TRIM16L-211ENST00000574042 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
TRIM16L-211ENST00000574042 NRXN3Q9Y4C0 1643 aa17.37■□□□□ 0.37
TRIM16L-211ENST00000574042 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
TRIM16L-211ENST00000574042 XRN1Q8IZH2 1706 aaKnown RBP17.36■□□□□ 0.37
TRIM16L-211ENST00000574042 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
TRIM16L-211ENST00000574042 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
TRIM16L-211ENST00000574042 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
TRIM16L-211ENST00000574042 NAIPQ13075 1403 aa17.34■□□□□ 0.37
TRIM16L-211ENST00000574042 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.37
TRIM16L-211ENST00000574042 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
TRIM16L-211ENST00000574042 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.36
TRIM16L-211ENST00000574042 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
TRIM16L-211ENST00000574042 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
TRIM16L-211ENST00000574042 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
TRIM16L-211ENST00000574042 DCCP43146 1447 aa17.3■□□□□ 0.36
TRIM16L-211ENST00000574042 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
TRIM16L-211ENST00000574042 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
TRIM16L-211ENST00000574042 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
TRIM16L-211ENST00000574042 KIF1BO60333 1816 aa17.29■□□□□ 0.36
TRIM16L-211ENST00000574042 JCADQ9P266 1359 aa17.27■□□□□ 0.35
TRIM16L-211ENST00000574042 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
TRIM16L-211ENST00000574042 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
TRIM16L-211ENST00000574042 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
TRIM16L-211ENST00000574042 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
TRIM16L-211ENST00000574042 RGS17Q9UGC6 210 aaPredicted RBP17.24■□□□□ 0.35
TRIM16L-211ENST00000574042 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
TRIM16L-211ENST00000574042 AMOTL2Q9Y2J4 779 aa17.23■□□□□ 0.35
TRIM16L-211ENST00000574042 SETD1AO15047 1707 aaKnown RBP17.23■□□□□ 0.35
TRIM16L-211ENST00000574042 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
TRIM16L-211ENST00000574042 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
TRIM16L-211ENST00000574042 ATF3P18847 181 aa17.22■□□□□ 0.35
TRIM16L-211ENST00000574042 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.35
TRIM16L-211ENST00000574042 METP08581 1390 aa17.21■□□□□ 0.35
TRIM16L-211ENST00000574042 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
TRIM16L-211ENST00000574042 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
TRIM16L-211ENST00000574042 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.34
TRIM16L-211ENST00000574042 MST1RQ04912 1400 aa17.2■□□□□ 0.34
TRIM16L-211ENST00000574042 LRP6O75581 1613 aa17.19■□□□□ 0.34
TRIM16L-211ENST00000574042 PPLO60437 1756 aa17.19■□□□□ 0.34
TRIM16L-211ENST00000574042 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
TRIM16L-211ENST00000574042 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
TRIM16L-211ENST00000574042 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
TRIM16L-211ENST00000574042 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
TRIM16L-211ENST00000574042 LAMC1P11047 1609 aa17.14■□□□□ 0.33
TRIM16L-211ENST00000574042 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
TRIM16L-211ENST00000574042 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
TRIM16L-211ENST00000574042 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
TRIM16L-211ENST00000574042 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
TRIM16L-211ENST00000574042 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
TRIM16L-211ENST00000574042 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
TRIM16L-211ENST00000574042 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
TRIM16L-211ENST00000574042 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
TRIM16L-211ENST00000574042 C1orf167Q5SNV9 1468 aa17.08■□□□□ 0.32
TRIM16L-211ENST00000574042 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
TRIM16L-211ENST00000574042 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
TRIM16L-211ENST00000574042 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
TRIM16L-211ENST00000574042 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
TRIM16L-211ENST00000574042 TECPR2O15040 1411 aa17.04■□□□□ 0.32
TRIM16L-211ENST00000574042 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
TRIM16L-211ENST00000574042 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
TRIM16L-211ENST00000574042 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
TRIM16L-211ENST00000574042 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
TRIM16L-211ENST00000574042 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
TRIM16L-211ENST00000574042 PIK3C2GO75747 1445 aa17.02■□□□□ 0.31
TRIM16L-211ENST00000574042 FOXD1Q16676 465 aa17.01■□□□□ 0.31
TRIM16L-211ENST00000574042 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
TRIM16L-211ENST00000574042 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 MYOM2P54296 1465 aa16.99■□□□□ 0.31
TRIM16L-211ENST00000574042 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms