RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TESK2Q96S53 571 aa21.73■■□□□ 1.07
USP43-204ENST00000573955 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
USP43-204ENST00000573955 DIP2CQ9Y2E4 1556 aa21.73■■□□□ 1.07
USP43-204ENST00000573955 MSH5O43196 834 aa21.71■■□□□ 1.07
USP43-204ENST00000573955 NPATQ14207 1427 aa21.71■■□□□ 1.07
USP43-204ENST00000573955 CCDC136Q96JN2 1154 aa21.71■■□□□ 1.07
USP43-204ENST00000573955 LAMC1P11047 1609 aa21.7■■□□□ 1.06
USP43-204ENST00000573955 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
USP43-204ENST00000573955 LMTK2Q8IWU2 1503 aa21.69■■□□□ 1.06
USP43-204ENST00000573955 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
USP43-204ENST00000573955 NUTM2DQ5VT03 806 aaPredicted RBP21.67■■□□□ 1.06
USP43-204ENST00000573955 TMF1P82094 1093 aa21.66■■□□□ 1.06
USP43-204ENST00000573955 KIF1BO60333 1816 aa21.66■■□□□ 1.06
USP43-204ENST00000573955 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
USP43-204ENST00000573955 ABCC3O15438 1527 aa21.65■■□□□ 1.06
USP43-204ENST00000573955 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
USP43-204ENST00000573955 BCANQ96GW7 911 aa21.62■■□□□ 1.05
USP43-204ENST00000573955 FKBP8Q14318 412 aa21.61■■□□□ 1.05
USP43-204ENST00000573955 STAC3Q96MF2 364 aa21.61■■□□□ 1.05
USP43-204ENST00000573955 FBXO31Q5XUX0 539 aaPredicted RBP21.61■■□□□ 1.05
USP43-204ENST00000573955 NOS1P29475 1434 aa21.61■■□□□ 1.05
USP43-204ENST00000573955 PANK3Q9H999 370 aa21.6■■□□□ 1.05
USP43-204ENST00000573955 SIGLEC1Q9BZZ2 1709 aa21.6■■□□□ 1.05
USP43-204ENST00000573955 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
USP43-204ENST00000573955 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
USP43-204ENST00000573955 IQGAP1P46940 1657 aa21.59■■□□□ 1.05
USP43-204ENST00000573955 CAMSAP1Q5T5Y3 1602 aa21.59■■□□□ 1.05
USP43-204ENST00000573955 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
USP43-204ENST00000573955 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.04
USP43-204ENST00000573955 MYOM2P54296 1465 aa21.56■■□□□ 1.04
USP43-204ENST00000573955 ADGRB3O60242 1522 aa21.56■■□□□ 1.04
USP43-204ENST00000573955 PER1O15534 1290 aaPredicted RBP21.56■■□□□ 1.04
USP43-204ENST00000573955 NEURL4Q96JN8 1562 aa21.55■■□□□ 1.04
USP43-204ENST00000573955 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
USP43-204ENST00000573955 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
USP43-204ENST00000573955 IFT172Q9UG01 1749 aa21.54■■□□□ 1.04
USP43-204ENST00000573955 NEFLP07196 543 aa21.54■■□□□ 1.04
USP43-204ENST00000573955 RALBP1Q15311 655 aa21.53■■□□□ 1.04
USP43-204ENST00000573955 EIF3AQ14152 1382 aaKnown RBP21.52■■□□□ 1.04
USP43-204ENST00000573955 ZMYM4Q5VZL5 1548 aa21.51■■□□□ 1.03
USP43-204ENST00000573955 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
USP43-204ENST00000573955 SYNMO15061 1565 aa21.5■■□□□ 1.03
USP43-204ENST00000573955 IDI1Q13907 227 aa21.5■■□□□ 1.03
USP43-204ENST00000573955 PNISRQ8TF01 805 aaKnown RBP21.5■■□□□ 1.03
USP43-204ENST00000573955 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
USP43-204ENST00000573955 KIAA1210Q9ULL0 1709 aa21.49■■□□□ 1.03
USP43-204ENST00000573955 TRAK1Q9UPV9 953 aa21.49■■□□□ 1.03
USP43-204ENST00000573955 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
USP43-204ENST00000573955 PARD3Q8TEW0 1356 aa21.47■■□□□ 1.03
USP43-204ENST00000573955 IRX6P78412 446 aaPredicted RBP21.47■■□□□ 1.03
USP43-204ENST00000573955 PKNOX2Q96KN3 472 aa21.47■■□□□ 1.03
USP43-204ENST00000573955 NRXN1Q9ULB1 1477 aa21.47■■□□□ 1.03
USP43-204ENST00000573955 PPLO60437 1756 aa21.46■■□□□ 1.03
USP43-204ENST00000573955 BRD4O60885 1362 aaPredicted RBP21.46■■□□□ 1.03
USP43-204ENST00000573955 CDCA8Q53HL2 280 aa21.45■■□□□ 1.02
USP43-204ENST00000573955 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
USP43-204ENST00000573955 NLRP13Q86W25 1043 aa21.44■■□□□ 1.02
USP43-204ENST00000573955 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
USP43-204ENST00000573955 ZC3H13Q5T200 1668 aaKnown RBP21.44■■□□□ 1.02
USP43-204ENST00000573955 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
USP43-204ENST00000573955 ARHGAP31Q2M1Z3 1444 aa21.43■■□□□ 1.02
USP43-204ENST00000573955 C14orf93Q9H972 538 aaKnown RBP21.43■■□□□ 1.02
USP43-204ENST00000573955 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.43■■□□□ 1.02
USP43-204ENST00000573955 PIK3C2BO00750 1634 aa21.42■■□□□ 1.02
USP43-204ENST00000573955 RPGRIP1LQ68CZ1 1315 aa21.42■■□□□ 1.02
USP43-204ENST00000573955 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
USP43-204ENST00000573955 CLTCQ00610 1675 aaKnown RBP21.4■■□□□ 1.02
USP43-204ENST00000573955 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
USP43-204ENST00000573955 ERVK-7P63135 1459 aa21.4■■□□□ 1.02
USP43-204ENST00000573955 VGFO15240 615 aaPredicted RBP21.4■■□□□ 1.02
USP43-204ENST00000573955 SLC52A1Q9NWF4 448 aa21.39■■□□□ 1.01
USP43-204ENST00000573955 PREX1Q8TCU6 1659 aa21.38■■□□□ 1.01
USP43-204ENST00000573955 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
USP43-204ENST00000573955 CEBPAP49715 358 aaPredicted RBP21.38■■□□□ 1.01
USP43-204ENST00000573955 NEXMIFQ5QGS0 1516 aa21.38■■□□□ 1.01
USP43-204ENST00000573955 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
USP43-204ENST00000573955 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
USP43-204ENST00000573955 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
USP43-204ENST00000573955 MYO5BQ9ULV0 1848 aa21.36■■□□□ 1.01
USP43-204ENST00000573955 MYOM1P52179 1685 aa21.36■■□□□ 1.01
USP43-204ENST00000573955 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
USP43-204ENST00000573955 SAFB2Q14151 953 aaKnown RBP eCLIP21.36■■□□□ 1.01
USP43-204ENST00000573955 ADGRB1O14514 1584 aa21.35■■□□□ 1.01
USP43-204ENST00000573955 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
USP43-204ENST00000573955 STK26Q9P289 416 aa21.35■■□□□ 1.01
USP43-204ENST00000573955 SETBP1Q9Y6X0 1596 aa21.35■■□□□ 1.01
USP43-204ENST00000573955 TMEM131LA2VDJ0 1609 aa21.3■■□□□ 1
USP43-204ENST00000573955 PPP2R1AP30153 589 aa21.29■■□□□ 1
USP43-204ENST00000573955 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
USP43-204ENST00000573955 QRICH2Q9H0J4 1663 aa21.29■■□□□ 1
USP43-204ENST00000573955 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
USP43-204ENST00000573955 AGLP35573 1532 aa21.29■■□□□ 1
USP43-204ENST00000573955 ZMYM3Q14202 1370 aa21.29■■□□□ 1
USP43-204ENST00000573955 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
USP43-204ENST00000573955 REREQ9P2R6 1566 aa21.28■■□□□ 1
USP43-204ENST00000573955 SLC12A5Q9H2X9 1139 aa21.27■■□□□ 1
USP43-204ENST00000573955 SBNO2Q9Y2G9 1366 aa21.27■■□□□ 1
USP43-204ENST00000573955 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
USP43-204ENST00000573955 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
USP43-204ENST00000573955 IL27Q8NEV9 243 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms